RNA–Protein interactions for RNA: ENST00000484186.5

NUP50-215, Transcript of nucleoporin 50, humanhuman

TSL 5

Gene NUP50, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-215ENST00000484186 ACEP12821 1306 aa13.57□□□□□ -0.24
NUP50-215ENST00000484186 ABCA3Q99758 1704 aa13.56□□□□□ -0.24
NUP50-215ENST00000484186 ONECUT3O60422 494 aaPredicted RBP13.56□□□□□ -0.24
NUP50-215ENST00000484186 SEPT12Q8IYM1 358 aa13.56□□□□□ -0.24
NUP50-215ENST00000484186 BTG4Q9NY30 223 aa13.56□□□□□ -0.24
NUP50-215ENST00000484186 POLR3AO14802 1390 aaPredicted RBP13.56□□□□□ -0.24
NUP50-215ENST00000484186 ITSN1Q15811 1721 aa13.56□□□□□ -0.24
NUP50-215ENST00000484186 SRPK2P78362 688 aaKnown RBP13.55□□□□□ -0.24
NUP50-215ENST00000484186 NWD2Q9ULI1 1742 aa13.55□□□□□ -0.24
NUP50-215ENST00000484186 PLCH1Q4KWH8 1693 aa13.54□□□□□ -0.24
NUP50-215ENST00000484186 CABP2Q9NPB3 220 aa13.54□□□□□ -0.24
NUP50-215ENST00000484186 NUTM2GQ5VZR2 741 aa13.53□□□□□ -0.24
NUP50-215ENST00000484186 PRDM11Q9NQV5 511 aa13.53□□□□□ -0.24
NUP50-215ENST00000484186 ABTB2Q8N961 1025 aa13.52□□□□□ -0.25
NUP50-215ENST00000484186 TOPAZ1Q8N9V7 1692 aa13.52□□□□□ -0.25
NUP50-215ENST00000484186 COL14A1Q05707 1796 aaKnown RBP13.52□□□□□ -0.25
NUP50-215ENST00000484186 PPIP5K1Q6PFW1 1433 aa13.51□□□□□ -0.25
NUP50-215ENST00000484186 ZC3H6P61129 1189 aaKnown RBP13.51□□□□□ -0.25
NUP50-215ENST00000484186 FAM98CQ17RN3 349 aaKnown RBP13.51□□□□□ -0.25
NUP50-215ENST00000484186 KRT27Q7Z3Y8 459 aa13.51□□□□□ -0.25
NUP50-215ENST00000484186 ROCK2O75116 1388 aaKnown RBP13.5□□□□□ -0.25
NUP50-215ENST00000484186 KIAA0232Q92628 1395 aa13.5□□□□□ -0.25
NUP50-215ENST00000484186 SPATA31A5Q5VU36 1347 aa13.5□□□□□ -0.25
NUP50-215ENST00000484186 EVC2Q86UK5 1308 aa13.5□□□□□ -0.25
NUP50-215ENST00000484186 SPATA31A7Q8IWB4 1347 aa13.5□□□□□ -0.25
NUP50-215ENST00000484186 A0A0G2JS52 829 aa13.5□□□□□ -0.25
NUP50-215ENST00000484186 MYT1Q01538 1121 aa13.5□□□□□ -0.25
NUP50-215ENST00000484186 CABP1Q9NZU7 370 aa13.5□□□□□ -0.25
NUP50-215ENST00000484186 CRYBG1Q9Y4K1 1723 aa13.5□□□□□ -0.25
NUP50-215ENST00000484186 CHRNA2Q15822 529 aa13.49□□□□□ -0.25
NUP50-215ENST00000484186 NLRP13Q86W25 1043 aa13.49□□□□□ -0.25
NUP50-215ENST00000484186 NRAPQ86VF7 1730 aa13.49□□□□□ -0.25
NUP50-215ENST00000484186 TRPM1Q7Z4N2 1603 aa13.49□□□□□ -0.25
NUP50-215ENST00000484186 BLMP54132 1417 aaPredicted RBP13.48□□□□□ -0.25
NUP50-215ENST00000484186 BRWD3Q6RI45 1802 aa13.48□□□□□ -0.25
NUP50-215ENST00000484186 BRD4O60885 1362 aaPredicted RBP13.48□□□□□ -0.25
NUP50-215ENST00000484186 QRICH2Q9H0J4 1663 aa13.47□□□□□ -0.25
NUP50-215ENST00000484186 USP19O94966 1318 aa13.47□□□□□ -0.25
NUP50-215ENST00000484186 SF3B2Q13435 895 aaKnown RBP13.47□□□□□ -0.25
NUP50-215ENST00000484186 ZRANB1Q9UGI0 708 aa13.47□□□□□ -0.25
NUP50-215ENST00000484186 GCP02774 474 aa13.46□□□□□ -0.25
NUP50-215ENST00000484186 EVA1CP58658 441 aa13.46□□□□□ -0.25
NUP50-215ENST00000484186 STRN4Q9NRL3 753 aa13.46□□□□□ -0.25
NUP50-215ENST00000484186 PHRF1Q9P1Y6 1649 aaKnown RBP13.46□□□□□ -0.26
NUP50-215ENST00000484186 SPATA31A1Q5TZJ5 1347 aa13.45□□□□□ -0.26
NUP50-215ENST00000484186 ZNF692Q9BU19 519 aaPredicted RBP13.45□□□□□ -0.26
NUP50-215ENST00000484186 NLRP6P59044 892 aa13.44□□□□□ -0.26
NUP50-215ENST00000484186 TRIM26Q12899 539 aaPredicted RBP13.44□□□□□ -0.26
NUP50-215ENST00000484186 DEFB132Q7Z7B7 95 aa13.44□□□□□ -0.26
NUP50-215ENST00000484186 CARD11Q9BXL7 1154 aa13.44□□□□□ -0.26
NUP50-215ENST00000484186 USP6P35125 1406 aa13.44□□□□□ -0.26
NUP50-215ENST00000484186 CPDO75976 1380 aa13.44□□□□□ -0.26
NUP50-215ENST00000484186 EP400Q96L91 3159 aa13.43□□□□□ -0.26
NUP50-215ENST00000484186 TONSLQ96HA7 1378 aa13.43□□□□□ -0.26
NUP50-215ENST00000484186 NRKQ7Z2Y5 1582 aa13.42□□□□□ -0.26
NUP50-215ENST00000484186 SSH2Q76I76 1423 aa13.42□□□□□ -0.26
NUP50-215ENST00000484186 USP35Q9P2H5 1018 aa13.42□□□□□ -0.26
NUP50-215ENST00000484186 FAM182BQ5T319 152 aa13.41□□□□□ -0.26
NUP50-215ENST00000484186 LARP1Q6PKG0 1096 aaKnown RBP13.41□□□□□ -0.26
NUP50-215ENST00000484186 BARGINQ6ZT62 677 aa13.41□□□□□ -0.26
NUP50-215ENST00000484186 CAMTA1Q9Y6Y1 1673 aa13.4□□□□□ -0.26
NUP50-215ENST00000484186 TTC21BQ7Z4L5 1316 aa13.4□□□□□ -0.26
NUP50-215ENST00000484186 BAG6P46379 1132 aa13.4□□□□□ -0.26
NUP50-215ENST00000484186 THSD7AQ9UPZ6 1657 aa13.4□□□□□ -0.26
NUP50-215ENST00000484186 ZBTB7CA1YPR0 619 aa13.39□□□□□ -0.27
NUP50-215ENST00000484186 TCP11L2Q8N4U5 519 aa13.39□□□□□ -0.27
NUP50-215ENST00000484186 THRAP3Q9Y2W1 955 aaKnown RBP13.39□□□□□ -0.27
NUP50-215ENST00000484186 SBNO2Q9Y2G9 1366 aa13.39□□□□□ -0.27
NUP50-215ENST00000484186 LMO7Q8WWI1 1683 aa13.38□□□□□ -0.27
NUP50-215ENST00000484186 FAM196AQ6ZSG2 479 aa13.38□□□□□ -0.27
NUP50-215ENST00000484186 CPSF1Q10570 1443 aaKnown RBP13.38□□□□□ -0.27
NUP50-215ENST00000484186 TTC21AQ8NDW8 1320 aa13.38□□□□□ -0.27
NUP50-215ENST00000484186 AATKQ6ZMQ8 1374 aa13.37□□□□□ -0.27
NUP50-215ENST00000484186 PDE3BQ13370 1112 aa13.37□□□□□ -0.27
NUP50-215ENST00000484186 KCNH5Q8NCM2 988 aa13.37□□□□□ -0.27
NUP50-215ENST00000484186 SLIT3O75094 1523 aa13.37□□□□□ -0.27
NUP50-215ENST00000484186 KTN1Q86UP2 1357 aaKnown RBP13.36□□□□□ -0.27
NUP50-215ENST00000484186 COL5A2P05997 1499 aaPredicted RBP13.36□□□□□ -0.27
NUP50-215ENST00000484186 PIK3C2AO00443 1686 aa13.35□□□□□ -0.27
NUP50-215ENST00000484186 EN1Q05925 392 aaPredicted RBP13.35□□□□□ -0.27
NUP50-215ENST00000484186 ARHGEF25Q86VW2 580 aa13.35□□□□□ -0.27
NUP50-215ENST00000484186 AXIN2Q9Y2T1 843 aa13.35□□□□□ -0.27
NUP50-215ENST00000484186 CRB1P82279 1406 aa13.34□□□□□ -0.27
NUP50-215ENST00000484186 TRIM37O94972 964 aa13.34□□□□□ -0.27
NUP50-215ENST00000484186 TMC1Q8TDI8 760 aa13.34□□□□□ -0.27
NUP50-215ENST00000484186 PUS7Q96PZ0 661 aaKnown RBP13.34□□□□□ -0.27
NUP50-215ENST00000484186 AKAP12Q02952 1782 aa13.34□□□□□ -0.27
NUP50-215ENST00000484186 SOX12O15370 315 aa13.33□□□□□ -0.28
NUP50-215ENST00000484186 TOM1L2Q6ZVM7 507 aa13.33□□□□□ -0.28
NUP50-215ENST00000484186 HDGFL2Q7Z4V5 671 aaPredicted RBP13.33□□□□□ -0.28
NUP50-215ENST00000484186 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.33□□□□□ -0.28
NUP50-215ENST00000484186 SLC12A5Q9H2X9 1139 aa13.33□□□□□ -0.28
NUP50-215ENST00000484186 RGPD1P0DJD0 1748 aa13.33□□□□□ -0.28
NUP50-215ENST00000484186 SLC24A1O60721 1099 aa13.32□□□□□ -0.28
NUP50-215ENST00000484186 DISP2A7MBM2 1401 aa13.31□□□□□ -0.28
NUP50-215ENST00000484186 ST20-MTHFSA0A0A6YYL1 179 aa13.31□□□□□ -0.28
NUP50-215ENST00000484186 APBA3O96018 575 aa13.31□□□□□ -0.28
NUP50-215ENST00000484186 EZH2Q15910 746 aaKnown RBP13.31□□□□□ -0.28
NUP50-215ENST00000484186 CAMKK2Q96RR4 588 aa13.31□□□□□ -0.28
NUP50-215ENST00000484186 TESK2Q96S53 571 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms