RNA–Protein interactions for RNA: ENST00000483941.1

SMAD9-204, Transcript of SMAD family member 9, humanhuman

TSL 3

Gene SMAD9, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-204ENST00000483941 WASLO00401 505 aaPredicted RBP19.15■□□□□ 0.66
SMAD9-204ENST00000483941 CDK19Q9BWU1 502 aa19.15■□□□□ 0.66
SMAD9-204ENST00000483941 ESCO1Q5FWF5 840 aa19.14■□□□□ 0.65
SMAD9-204ENST00000483941 PLEKHH1Q9ULM0 1364 aa19.14■□□□□ 0.65
SMAD9-204ENST00000483941 KIF1AQ12756 1690 aa19.14■□□□□ 0.65
SMAD9-204ENST00000483941 SLIT2O94813 1529 aa19.13■□□□□ 0.65
SMAD9-204ENST00000483941 PLCH1Q4KWH8 1693 aa19.11■□□□□ 0.65
SMAD9-204ENST00000483941 XPCQ01831 940 aaPredicted RBP19.11■□□□□ 0.65
SMAD9-204ENST00000483941 TMC1Q8TDI8 760 aa19.11■□□□□ 0.65
SMAD9-204ENST00000483941 PANK3Q9H999 370 aa19.11■□□□□ 0.65
SMAD9-204ENST00000483941 CABP2Q9NPB3 220 aa19.11■□□□□ 0.65
SMAD9-204ENST00000483941 FMN2Q9NZ56 1722 aa19.11■□□□□ 0.65
SMAD9-204ENST00000483941 TULP4Q9NRJ4 1543 aa19.1■□□□□ 0.65
SMAD9-204ENST00000483941 NWD2Q9ULI1 1742 aa19.09■□□□□ 0.65
SMAD9-204ENST00000483941 FOXO3O43524 673 aa19.09■□□□□ 0.65
SMAD9-204ENST00000483941 UNC5CLQ8IV45 518 aa19.09■□□□□ 0.65
SMAD9-204ENST00000483941 TERF2IPQ9NYB0 399 aa19.09■□□□□ 0.65
SMAD9-204ENST00000483941 KNSTRNQ9Y448 316 aa19.09■□□□□ 0.65
SMAD9-204ENST00000483941 ABCA3Q99758 1704 aa19.08■□□□□ 0.65
SMAD9-204ENST00000483941 ADGRB2O60241 1585 aa19.08■□□□□ 0.65
SMAD9-204ENST00000483941 KTN1Q86UP2 1357 aaKnown RBP19.07■□□□□ 0.64
SMAD9-204ENST00000483941 DEFB132Q7Z7B7 95 aa19.07■□□□□ 0.64
SMAD9-204ENST00000483941 CCDC61Q9Y6R9 512 aa19.07■□□□□ 0.64
SMAD9-204ENST00000483941 SF3B2Q13435 895 aaKnown RBP19.06■□□□□ 0.64
SMAD9-204ENST00000483941 HDGFL2Q7Z4V5 671 aaPredicted RBP19.06■□□□□ 0.64
SMAD9-204ENST00000483941 NUDT16Q96DE0 195 aaKnown RBP19.05■□□□□ 0.64
SMAD9-204ENST00000483941 SLC12A5Q9H2X9 1139 aa19.04■□□□□ 0.64
SMAD9-204ENST00000483941 ANKRD36BQ8N2N9 1353 aa19.04■□□□□ 0.64
SMAD9-204ENST00000483941 SPATA31A3Q5VYP0 1347 aa19.03■□□□□ 0.64
SMAD9-204ENST00000483941 NUTM2FA1L443 756 aa19.03■□□□□ 0.64
SMAD9-204ENST00000483941 PER1O15534 1290 aaPredicted RBP19.03■□□□□ 0.64
SMAD9-204ENST00000483941 RGPD8O14715 1765 aaPredicted RBP19.03■□□□□ 0.64
SMAD9-204ENST00000483941 RALBP1Q15311 655 aa19.02■□□□□ 0.64
SMAD9-204ENST00000483941 MIER1Q8N108 512 aa19.02■□□□□ 0.64
SMAD9-204ENST00000483941 ZNF692Q9BU19 519 aaPredicted RBP19.02■□□□□ 0.64
SMAD9-204ENST00000483941 TNS3Q68CZ2 1445 aa19.01■□□□□ 0.63
SMAD9-204ENST00000483941 ANKARQ7Z5J8 1434 aa19.01■□□□□ 0.63
SMAD9-204ENST00000483941 SEPT12Q8IYM1 358 aa19.01■□□□□ 0.63
SMAD9-204ENST00000483941 CABP1Q9NZU7 370 aa19.01■□□□□ 0.63
SMAD9-204ENST00000483941 NPC1L1Q9UHC9 1359 aa19.01■□□□□ 0.63
SMAD9-204ENST00000483941 CCER2I3L3R5 266 aa19■□□□□ 0.63
SMAD9-204ENST00000483941 RGPD1P0DJD0 1748 aa19■□□□□ 0.63
SMAD9-204ENST00000483941 NRAPQ86VF7 1730 aa19■□□□□ 0.63
SMAD9-204ENST00000483941 ATP7BP35670 1465 aa18.99■□□□□ 0.63
SMAD9-204ENST00000483941 VPS72Q15906 364 aa18.99■□□□□ 0.63
SMAD9-204ENST00000483941 PRKRIP1Q9H875 184 aaPredicted RBP18.99■□□□□ 0.63
SMAD9-204ENST00000483941 PLEKHG3A1L390 1219 aa18.98■□□□□ 0.63
SMAD9-204ENST00000483941 HAP1P54257 671 aaPredicted RBP18.98■□□□□ 0.63
SMAD9-204ENST00000483941 PPIP5K1Q6PFW1 1433 aa18.98■□□□□ 0.63
SMAD9-204ENST00000483941 CGNL1Q0VF96 1302 aa18.98■□□□□ 0.63
SMAD9-204ENST00000483941 KRT27Q7Z3Y8 459 aa18.97■□□□□ 0.63
SMAD9-204ENST00000483941 MYOM1P52179 1685 aa18.96■□□□□ 0.63
SMAD9-204ENST00000483941 CCDC9Q9Y3X0 531 aaKnown RBP18.96■□□□□ 0.63
SMAD9-204ENST00000483941 NSD2O96028 1365 aa18.95■□□□□ 0.62
SMAD9-204ENST00000483941 PSDA5PKW4 1024 aaPredicted RBP18.95■□□□□ 0.62
SMAD9-204ENST00000483941 KRT28Q7Z3Y7 464 aa18.95■□□□□ 0.62
SMAD9-204ENST00000483941 BAG6P46379 1132 aa18.94■□□□□ 0.62
SMAD9-204ENST00000483941 CARD14Q9BXL6 1004 aa18.94■□□□□ 0.62
SMAD9-204ENST00000483941 A0A1W2PP64 1363 aa18.93■□□□□ 0.62
SMAD9-204ENST00000483941 NSD3Q9BZ95 1437 aa18.93■□□□□ 0.62
SMAD9-204ENST00000483941 ONECUT3O60422 494 aaPredicted RBP18.93■□□□□ 0.62
SMAD9-204ENST00000483941 AMER1Q5JTC6 1135 aaPredicted RBP18.93■□□□□ 0.62
SMAD9-204ENST00000483941 TNS1Q9HBL0 1735 aaKnown RBP18.93■□□□□ 0.62
SMAD9-204ENST00000483941 PRR36Q9H6K5 1346 aa18.93■□□□□ 0.62
SMAD9-204ENST00000483941 A0A0G2JS52 829 aa18.92■□□□□ 0.62
SMAD9-204ENST00000483941 MYT1Q01538 1121 aa18.92■□□□□ 0.62
SMAD9-204ENST00000483941 CABLES1Q8TDN4 633 aa18.92■□□□□ 0.62
SMAD9-204ENST00000483941 SBNO1A3KN83 1393 aa18.92■□□□□ 0.62
SMAD9-204ENST00000483941 ARHGEF10O15013 1369 aa18.92■□□□□ 0.62
SMAD9-204ENST00000483941 CC2D1BQ5T0F9 858 aaKnown RBP18.91■□□□□ 0.62
SMAD9-204ENST00000483941 NGDNQ8NEJ9 315 aaKnown RBP18.91■□□□□ 0.62
SMAD9-204ENST00000483941 BRD4O60885 1362 aaPredicted RBP18.91■□□□□ 0.62
SMAD9-204ENST00000483941 COL14A1Q05707 1796 aaKnown RBP18.91■□□□□ 0.62
SMAD9-204ENST00000483941 CPSF1Q10570 1443 aaKnown RBP18.91■□□□□ 0.62
SMAD9-204ENST00000483941 PLEKHG5O94827 1062 aa18.9■□□□□ 0.62
SMAD9-204ENST00000483941 PSME1Q06323 249 aa18.9■□□□□ 0.62
SMAD9-204ENST00000483941 PHF8Q9UPP1 1060 aa18.9■□□□□ 0.62
SMAD9-204ENST00000483941 MYBBP1AQ9BQG0 1328 aaKnown RBP18.9■□□□□ 0.62
SMAD9-204ENST00000483941 ITSN1Q15811 1721 aa18.89■□□□□ 0.61
SMAD9-204ENST00000483941 TRPM3Q9HCF6 1732 aaPredicted RBP18.89■□□□□ 0.61
SMAD9-204ENST00000483941 ACEP12821 1306 aa18.89■□□□□ 0.61
SMAD9-204ENST00000483941 PARD3Q8TEW0 1356 aa18.89■□□□□ 0.61
SMAD9-204ENST00000483941 EDC4Q6P2E9 1401 aaKnown RBP18.89■□□□□ 0.61
SMAD9-204ENST00000483941 POLR3AO14802 1390 aaPredicted RBP18.88■□□□□ 0.61
SMAD9-204ENST00000483941 CD163L1Q9NR16 1453 aa18.88■□□□□ 0.61
SMAD9-204ENST00000483941 LMOD2Q6P5Q4 547 aa18.87■□□□□ 0.61
SMAD9-204ENST00000483941 MORC1Q86VD1 984 aa18.87■□□□□ 0.61
SMAD9-204ENST00000483941 ALS2Q96Q42 1657 aa18.87■□□□□ 0.61
SMAD9-204ENST00000483941 THSD7AQ9UPZ6 1657 aa18.87■□□□□ 0.61
SMAD9-204ENST00000483941 FAM98CQ17RN3 349 aaKnown RBP18.86■□□□□ 0.61
SMAD9-204ENST00000483941 NLRP13Q86W25 1043 aa18.86■□□□□ 0.61
SMAD9-204ENST00000483941 DISP2A7MBM2 1401 aa18.85■□□□□ 0.61
SMAD9-204ENST00000483941 TTC21AQ8NDW8 1320 aa18.85■□□□□ 0.61
SMAD9-204ENST00000483941 CNGB1Q14028 1251 aaPredicted RBP18.85■□□□□ 0.61
SMAD9-204ENST00000483941 CRYBG1Q9Y4K1 1723 aa18.85■□□□□ 0.61
SMAD9-204ENST00000483941 TOPAZ1Q8N9V7 1692 aa18.85■□□□□ 0.61
SMAD9-204ENST00000483941 FAM83GA6ND36 823 aa18.84■□□□□ 0.61
SMAD9-204ENST00000483941 PMFBP1Q8TBY8 1022 aa18.84■□□□□ 0.61
SMAD9-204ENST00000483941 EN1Q05925 392 aaPredicted RBP18.83■□□□□ 0.6
SMAD9-204ENST00000483941 FYB1O15117 783 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms