RNA–Protein interactions for RNA: ENST00000483891.1

COPS6-209, Transcript of COP9 signalosome subunit 6, humanhuman

TSL 3

Gene COPS6, Length 734 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS6-209ENST00000483891 RPGRIP1LQ68CZ1 1315 aa8.63□□□□□ -1.03
COPS6-209ENST00000483891 VGFO15240 615 aaPredicted RBP8.61□□□□□ -1.03
COPS6-209ENST00000483891 FAM98CQ17RN3 349 aaKnown RBP8.61□□□□□ -1.03
COPS6-209ENST00000483891 NBPF8Q3BBV2 869 aa8.61□□□□□ -1.03
COPS6-209ENST00000483891 NBPF14Q5TI25 921 aa8.61□□□□□ -1.03
COPS6-209ENST00000483891 PPP1R1BQ9UD71 204 aaPredicted RBP8.61□□□□□ -1.03
COPS6-209ENST00000483891 PIK3C2GO75747 1445 aa8.61□□□□□ -1.03
COPS6-209ENST00000483891 TNS3Q68CZ2 1445 aa8.61□□□□□ -1.03
COPS6-209ENST00000483891 RGPD3A6NKT7 1758 aaPredicted RBP8.61□□□□□ -1.03
COPS6-209ENST00000483891 COL14A1Q05707 1796 aaKnown RBP8.61□□□□□ -1.03
COPS6-209ENST00000483891 RGPD4Q7Z3J3 1758 aa8.61□□□□□ -1.03
COPS6-209ENST00000483891 CASZ1Q86V15 1759 aa8.61□□□□□ -1.03
COPS6-209ENST00000483891 FMN2Q9NZ56 1722 aa8.6□□□□□ -1.03
COPS6-209ENST00000483891 FAM83GA6ND36 823 aa8.6□□□□□ -1.03
COPS6-209ENST00000483891 XPCQ01831 940 aaPredicted RBP8.6□□□□□ -1.03
COPS6-209ENST00000483891 FAM196AQ6ZSG2 479 aa8.6□□□□□ -1.03
COPS6-209ENST00000483891 CCDC9Q9Y3X0 531 aaKnown RBP8.6□□□□□ -1.03
COPS6-209ENST00000483891 SBNO1A3KN83 1393 aa8.6□□□□□ -1.03
COPS6-209ENST00000483891 SPATA31A5Q5VU36 1347 aa8.59□□□□□ -1.03
COPS6-209ENST00000483891 SPATA31A7Q8IWB4 1347 aa8.59□□□□□ -1.03
COPS6-209ENST00000483891 NRXN1Q9ULB1 1477 aa8.59□□□□□ -1.03
COPS6-209ENST00000483891 CFAP70Q5T0N1 1121 aa8.59□□□□□ -1.03
COPS6-209ENST00000483891 ROCK2O75116 1388 aaKnown RBP8.59□□□□□ -1.03
COPS6-209ENST00000483891 RGPD8O14715 1765 aaPredicted RBP8.58□□□□□ -1.04
COPS6-209ENST00000483891 TECPR2O15040 1411 aa8.58□□□□□ -1.04
COPS6-209ENST00000483891 APBA3O96018 575 aa8.58□□□□□ -1.04
COPS6-209ENST00000483891 MYCNP04198 464 aaPredicted RBP8.58□□□□□ -1.04
COPS6-209ENST00000483891 KRT28Q7Z3Y7 464 aa8.58□□□□□ -1.04
COPS6-209ENST00000483891 ARHGEF10O15013 1369 aa8.58□□□□□ -1.04
COPS6-209ENST00000483891 NRKQ7Z2Y5 1582 aa8.57□□□□□ -1.04
COPS6-209ENST00000483891 A0A0G2JS52 829 aa8.57□□□□□ -1.04
COPS6-209ENST00000483891 TRIM37O94972 964 aa8.57□□□□□ -1.04
COPS6-209ENST00000483891 ZEB1P37275 1124 aaPredicted RBP8.57□□□□□ -1.04
COPS6-209ENST00000483891 MYT1Q01538 1121 aa8.57□□□□□ -1.04
COPS6-209ENST00000483891 PSME1Q06323 249 aa8.57□□□□□ -1.04
COPS6-209ENST00000483891 FAM182BQ5T319 152 aa8.57□□□□□ -1.04
COPS6-209ENST00000483891 TMEM132EQ6IEE7 984 aa8.57□□□□□ -1.04
COPS6-209ENST00000483891 STK26Q9P289 416 aa8.57□□□□□ -1.04
COPS6-209ENST00000483891 TIMELESSQ9UNS1 1208 aa8.57□□□□□ -1.04
COPS6-209ENST00000483891 TRPM1Q7Z4N2 1603 aa8.57□□□□□ -1.04
COPS6-209ENST00000483891 KNDC1Q76NI1 1749 aa8.57□□□□□ -1.04
COPS6-209ENST00000483891 NBPF1Q3BBV0 1214 aa8.56□□□□□ -1.04
COPS6-209ENST00000483891 CABLES1Q8TDN4 633 aa8.56□□□□□ -1.04
COPS6-209ENST00000483891 MYOM1P52179 1685 aa8.56□□□□□ -1.04
COPS6-209ENST00000483891 CRYBG1Q9Y4K1 1723 aa8.55□□□□□ -1.04
COPS6-209ENST00000483891 HAP1P54257 671 aaPredicted RBP8.55□□□□□ -1.04
COPS6-209ENST00000483891 CARD11Q9BXL7 1154 aa8.55□□□□□ -1.04
COPS6-209ENST00000483891 C14orf93Q9H972 538 aaKnown RBP8.55□□□□□ -1.04
COPS6-209ENST00000483891 BTG4Q9NY30 223 aa8.55□□□□□ -1.04
COPS6-209ENST00000483891 GOLGB1Q14789 3259 aaKnown RBP8.55□□□□□ -1.04
COPS6-209ENST00000483891 ALS2Q96Q42 1657 aa8.54□□□□□ -1.04
COPS6-209ENST00000483891 ADGRB1O14514 1584 aa8.54□□□□□ -1.04
COPS6-209ENST00000483891 GIGYF1O75420 1035 aaPredicted RBP8.54□□□□□ -1.04
COPS6-209ENST00000483891 STAC3Q96MF2 364 aa8.54□□□□□ -1.04
COPS6-209ENST00000483891 TRAK1Q9UPV9 953 aa8.54□□□□□ -1.04
COPS6-209ENST00000483891 TRPM3Q9HCF6 1732 aaPredicted RBP8.54□□□□□ -1.04
COPS6-209ENST00000483891 SPATA31A1Q5TZJ5 1347 aa8.54□□□□□ -1.04
COPS6-209ENST00000483891 MAP3K5Q99683 1374 aa8.53□□□□□ -1.04
COPS6-209ENST00000483891 SBF2Q86WG5 1849 aa8.53□□□□□ -1.04
COPS6-209ENST00000483891 C11orf95C9JLR9 678 aaPredicted RBP8.53□□□□□ -1.04
COPS6-209ENST00000483891 PTGER2P43116 358 aa8.53□□□□□ -1.04
COPS6-209ENST00000483891 SAFB2Q14151 953 aaKnown RBP eCLIP8.53□□□□□ -1.04
COPS6-209ENST00000483891 SYT17Q9BSW7 474 aa8.53□□□□□ -1.04
COPS6-209ENST00000483891 YTHDC2Q9H6S0 1430 aaKnown RBP8.53□□□□□ -1.04
COPS6-209ENST00000483891 KIAA1210Q9ULL0 1709 aa8.52□□□□□ -1.05
COPS6-209ENST00000483891 ABCC11Q96J66 1382 aa8.52□□□□□ -1.05
COPS6-209ENST00000483891 PLSCR1O15162 318 aa8.52□□□□□ -1.05
COPS6-209ENST00000483891 BARGINQ6ZT62 677 aa8.52□□□□□ -1.05
COPS6-209ENST00000483891 PHF8Q9UPP1 1060 aa8.52□□□□□ -1.05
COPS6-209ENST00000483891 DLC1Q96QB1 1528 aa8.52□□□□□ -1.05
COPS6-209ENST00000483891 SHANK3Q9BYB0 1731 aa8.51□□□□□ -1.05
COPS6-209ENST00000483891 USP47Q96K76 1375 aa8.51□□□□□ -1.05
COPS6-209ENST00000483891 SIRT1Q96EB6 747 aa8.51□□□□□ -1.05
COPS6-209ENST00000483891 HIRIP3Q9BW71 556 aaPredicted RBP8.51□□□□□ -1.05
COPS6-209ENST00000483891 U3KPZ7 1027 aaPredicted RBP8.51□□□□□ -1.05
COPS6-209ENST00000483891 EIF3AQ14152 1382 aaKnown RBP8.5□□□□□ -1.05
COPS6-209ENST00000483891 GPRASP1Q5JY77 1395 aa8.5□□□□□ -1.05
COPS6-209ENST00000483891 PLEKHH1Q9ULM0 1364 aa8.5□□□□□ -1.05
COPS6-209ENST00000483891 PRAM1Q96QH2 718 aa8.5□□□□□ -1.05
COPS6-209ENST00000483891 SGIP1Q9BQI5 828 aa8.5□□□□□ -1.05
COPS6-209ENST00000483891 PEAK1Q9H792 1746 aa8.5□□□□□ -1.05
COPS6-209ENST00000483891 POGKQ9P215 609 aa8.5□□□□□ -1.05
COPS6-209ENST00000483891 PARP4Q9UKK3 1724 aaKnown RBP8.49□□□□□ -1.05
COPS6-209ENST00000483891 NUTM2FA1L443 756 aa8.49□□□□□ -1.05
COPS6-209ENST00000483891 WAPLQ7Z5K2 1190 aa8.49□□□□□ -1.05
COPS6-209ENST00000483891 FHDC1Q9C0D6 1143 aaPredicted RBP8.49□□□□□ -1.05
COPS6-209ENST00000483891 ARHGEF28Q8N1W1 1705 aaKnown RBP8.49□□□□□ -1.05
COPS6-209ENST00000483891 HSPA5P11021 654 aaKnown RBP8.48□□□□□ -1.05
COPS6-209ENST00000483891 ANO8Q9HCE9 1232 aaPredicted RBP8.48□□□□□ -1.05
COPS6-209ENST00000483891 MINK1Q8N4C8 1332 aaPredicted RBP8.48□□□□□ -1.05
COPS6-209ENST00000483891 CENPJQ9HC77 1338 aaPredicted RBP8.48□□□□□ -1.05
COPS6-209ENST00000483891 ANKARQ7Z5J8 1434 aa8.47□□□□□ -1.05
COPS6-209ENST00000483891 QRICH2Q9H0J4 1663 aa8.47□□□□□ -1.05
COPS6-209ENST00000483891 COL24A1Q17RW2 1714 aa8.47□□□□□ -1.05
COPS6-209ENST00000483891 EIF4G2P78344 907 aaKnown RBP eCLIP8.47□□□□□ -1.05
COPS6-209ENST00000483891 PDE3BQ13370 1112 aa8.47□□□□□ -1.05
COPS6-209ENST00000483891 POLR3GLQ9BT43 218 aa8.47□□□□□ -1.05
COPS6-209ENST00000483891 ST20-MTHFSA0A0A6YYL1 179 aa8.46□□□□□ -1.06
COPS6-209ENST00000483891 HSPA6P17066 643 aa8.46□□□□□ -1.06
COPS6-209ENST00000483891 PDGFDQ9GZP0 370 aaPredicted RBP8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 103.7 ms