RNA–Protein interactions for RNA: ENST00000483888.6

COL12A1-207, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL12A1, Length 9,637 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-207ENST00000483888 OFD1O75665 1012 aa12.15□□□□□ -0.46
COL12A1-207ENST00000483888 HDAC5Q9UQL6 1122 aa12.15□□□□□ -0.46
COL12A1-207ENST00000483888 RSPH14Q9UHP6 348 aa12.15□□□□□ -0.46
COL12A1-207ENST00000483888 SETSIPP0DME0 302 aa12.15□□□□□ -0.46
COL12A1-207ENST00000483888 MCM3P25205 808 aa12.15□□□□□ -0.46
COL12A1-207ENST00000483888 SRRTQ9BXP5 876 aaKnown RBP12.15□□□□□ -0.46
COL12A1-207ENST00000483888 WDR66Q8TBY9 1149 aa12.14□□□□□ -0.47
COL12A1-207ENST00000483888 A0A1B0GUL7 405 aa12.14□□□□□ -0.47
COL12A1-207ENST00000483888 SMARCC1Q92922 1105 aaPredicted RBP12.13□□□□□ -0.47
COL12A1-207ENST00000483888 LIG1P18858 919 aa12.13□□□□□ -0.47
COL12A1-207ENST00000483888 PANK1Q8TE04 598 aa12.13□□□□□ -0.47
COL12A1-207ENST00000483888 DRC1Q96MC2 740 aa12.13□□□□□ -0.47
COL12A1-207ENST00000483888 CBFA2T2O43439 604 aa12.13□□□□□ -0.47
COL12A1-207ENST00000483888 PAXBP1Q9Y5B6 917 aa12.13□□□□□ -0.47
COL12A1-207ENST00000483888 DHX57Q6P158 1386 aaKnown RBP12.13□□□□□ -0.47
COL12A1-207ENST00000483888 CFDP1Q9UEE9 299 aaPredicted RBP12.13□□□□□ -0.47
COL12A1-207ENST00000483888 AAMPQ13685 434 aa12.13□□□□□ -0.47
COL12A1-207ENST00000483888 NEK4P51957 841 aa12.13□□□□□ -0.47
COL12A1-207ENST00000483888 CCDC148Q8NFR7 591 aa12.13□□□□□ -0.47
COL12A1-207ENST00000483888 ZNHIT6Q9NWK9 470 aaKnown RBP12.13□□□□□ -0.47
COL12A1-207ENST00000483888 VPS8Q8N3P4 1428 aa12.13□□□□□ -0.47
COL12A1-207ENST00000483888 GOLIM4O00461 696 aa12.13□□□□□ -0.47
COL12A1-207ENST00000483888 SOX12O15370 315 aa12.13□□□□□ -0.47
COL12A1-207ENST00000483888 FHAD1B1AJZ9 1412 aa12.13□□□□□ -0.47
COL12A1-207ENST00000483888 URI1O94763 535 aaPredicted RBP12.12□□□□□ -0.47
COL12A1-207ENST00000483888 CEP57Q86XR8 500 aa12.12□□□□□ -0.47
COL12A1-207ENST00000483888 ARID4AP29374 1257 aaPredicted RBP12.12□□□□□ -0.47
COL12A1-207ENST00000483888 WDR33Q9C0J8 1336 aaKnown RBP12.12□□□□□ -0.47
COL12A1-207ENST00000483888 CEP63Q96MT8 703 aa12.12□□□□□ -0.47
COL12A1-207ENST00000483888 PDCP20941 246 aa12.11□□□□□ -0.47
COL12A1-207ENST00000483888 NAA25Q14CX7 972 aa12.11□□□□□ -0.47
COL12A1-207ENST00000483888 LRCH2Q5VUJ6 765 aa12.11□□□□□ -0.47
COL12A1-207ENST00000483888 MRVI1Q9Y6F6 885 aa12.11□□□□□ -0.47
COL12A1-207ENST00000483888 CEBPZQ03701 1054 aaKnown RBP12.11□□□□□ -0.47
COL12A1-207ENST00000483888 CEP135Q66GS9 1140 aa12.11□□□□□ -0.47
COL12A1-207ENST00000483888 ANKRD18AQ8IVF6 992 aa12.11□□□□□ -0.47
COL12A1-207ENST00000483888 HSPA4P34932 840 aa12.1□□□□□ -0.47
COL12A1-207ENST00000483888 MAGEC2Q9UBF1 373 aaPredicted RBP12.1□□□□□ -0.47
COL12A1-207ENST00000483888 ROCK1Q13464 1354 aa12.1□□□□□ -0.47
COL12A1-207ENST00000483888 MYCBPQ99417 103 aaPredicted RBP12.1□□□□□ -0.47
COL12A1-207ENST00000483888 ZFYVE27Q5T4F4 411 aa12.1□□□□□ -0.47
COL12A1-207ENST00000483888 SUDS3Q9H7L9 328 aaPredicted RBP12.1□□□□□ -0.47
COL12A1-207ENST00000483888 OGFRQ9NZT2 677 aa12.1□□□□□ -0.47
COL12A1-207ENST00000483888 SWAP70Q9UH65 585 aa12.1□□□□□ -0.47
COL12A1-207ENST00000483888 TMX1Q9H3N1 280 aa12.1□□□□□ -0.47
COL12A1-207ENST00000483888 TRMT1Q9NXH9 659 aaKnown RBP12.1□□□□□ -0.47
COL12A1-207ENST00000483888 NUP62CLQ9H1M0 184 aa12.09□□□□□ -0.47
COL12A1-207ENST00000483888 KRBA2Q6ZNG9 492 aa12.09□□□□□ -0.47
COL12A1-207ENST00000483888 BCCIPQ9P287 314 aaKnown RBP eCLIP12.09□□□□□ -0.47
COL12A1-207ENST00000483888 SEPT6Q14141 434 aa12.09□□□□□ -0.47
COL12A1-207ENST00000483888 ZSCAN12O43309 604 aa12.09□□□□□ -0.47
COL12A1-207ENST00000483888 SAFBQ15424 915 aaKnown RBP eCLIP12.09□□□□□ -0.47
COL12A1-207ENST00000483888 RSRC1Q96IZ7 334 aaKnown RBP12.08□□□□□ -0.48
COL12A1-207ENST00000483888 CCDC175P0C221 793 aa12.08□□□□□ -0.48
COL12A1-207ENST00000483888 SCLT1Q96NL6 688 aa12.08□□□□□ -0.48
COL12A1-207ENST00000483888 XRCC6P12956 609 aaKnown RBP eCLIP12.08□□□□□ -0.48
COL12A1-207ENST00000483888 POTEB2H3BUK9 544 aa12.08□□□□□ -0.48
COL12A1-207ENST00000483888 ZNF396Q96N95 335 aaPredicted RBP12.08□□□□□ -0.48
COL12A1-207ENST00000483888 MPHOSPH9Q99550 1183 aa12.08□□□□□ -0.48
COL12A1-207ENST00000483888 PANK2Q9BZ23 570 aa12.08□□□□□ -0.48
COL12A1-207ENST00000483888 PDZRN3Q9UPQ7 1066 aa12.08□□□□□ -0.48
COL12A1-207ENST00000483888 CAPN2P17655 700 aa12.08□□□□□ -0.48
COL12A1-207ENST00000483888 ARHGAP29Q52LW3 1261 aa12.08□□□□□ -0.48
COL12A1-207ENST00000483888 CLIP2Q9UDT6 1046 aa12.08□□□□□ -0.48
COL12A1-207ENST00000483888 ADCY5O95622 1261 aa12.08□□□□□ -0.48
COL12A1-207ENST00000483888 SFPQP23246 707 aaKnown RBP eCLIP12.08□□□□□ -0.48
COL12A1-207ENST00000483888 MAP3K11Q16584 847 aa12.08□□□□□ -0.48
COL12A1-207ENST00000483888 CCDC183Q5T5S1 534 aa12.08□□□□□ -0.48
COL12A1-207ENST00000483888 NUP133Q8WUM0 1156 aa12.08□□□□□ -0.48
COL12A1-207ENST00000483888 A0A1B0GUA9 196 aa12.07□□□□□ -0.48
COL12A1-207ENST00000483888 NEBLO76041 1014 aa12.07□□□□□ -0.48
COL12A1-207ENST00000483888 LUC7LQ9NQ29 371 aaKnown RBP12.07□□□□□ -0.48
COL12A1-207ENST00000483888 EPB41L2O43491 1005 aaKnown RBP12.07□□□□□ -0.48
COL12A1-207ENST00000483888 KRT85P78386 507 aa12.07□□□□□ -0.48
COL12A1-207ENST00000483888 L3MBTL2Q969R5 705 aa12.07□□□□□ -0.48
COL12A1-207ENST00000483888 USP25Q9UHP3 1055 aa12.07□□□□□ -0.48
COL12A1-207ENST00000483888 KIF5CO60282 957 aa12.07□□□□□ -0.48
COL12A1-207ENST00000483888 DAAM2Q86T65 1068 aa12.07□□□□□ -0.48
COL12A1-207ENST00000483888 CNTLNQ9NXG0 1405 aa12.07□□□□□ -0.48
COL12A1-207ENST00000483888 FEZ1Q99689 392 aa12.07□□□□□ -0.48
COL12A1-207ENST00000483888 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.07□□□□□ -0.48
COL12A1-207ENST00000483888 PSMA5P28066 241 aa12.07□□□□□ -0.48
COL12A1-207ENST00000483888 MSL1Q68DK7 614 aa12.07□□□□□ -0.48
COL12A1-207ENST00000483888 CCDC113Q9H0I3 377 aa12.07□□□□□ -0.48
COL12A1-207ENST00000483888 UPF3BQ9BZI7 483 aaKnown RBP12.06□□□□□ -0.48
COL12A1-207ENST00000483888 APAF1O14727 1248 aa12.06□□□□□ -0.48
COL12A1-207ENST00000483888 HDGFL2Q7Z4V5 671 aaPredicted RBP12.06□□□□□ -0.48
COL12A1-207ENST00000483888 NINLQ9Y2I6 1382 aa12.06□□□□□ -0.48
COL12A1-207ENST00000483888 SAFB2Q14151 953 aaKnown RBP eCLIP12.06□□□□□ -0.48
COL12A1-207ENST00000483888 ARFGAP3Q9NP61 516 aa12.06□□□□□ -0.48
COL12A1-207ENST00000483888 RAI14Q9P0K7 980 aa12.06□□□□□ -0.48
COL12A1-207ENST00000483888 NFXL1Q6ZNB6 911 aa12.05□□□□□ -0.48
COL12A1-207ENST00000483888 CCDC160A6NGH7 325 aa12.05□□□□□ -0.48
COL12A1-207ENST00000483888 GIGYF2Q6Y7W6 1299 aaKnown RBP12.05□□□□□ -0.48
COL12A1-207ENST00000483888 CEP57L1Q8IYX8 460 aa12.05□□□□□ -0.48
COL12A1-207ENST00000483888 NOLC1Q14978 699 aaKnown RBP eCLIP12.05□□□□□ -0.48
COL12A1-207ENST00000483888 PANK3Q9H999 370 aa12.05□□□□□ -0.48
COL12A1-207ENST00000483888 ELL2O00472 640 aaPredicted RBP12.05□□□□□ -0.48
COL12A1-207ENST00000483888 SNW1Q13573 536 aaKnown RBP12.05□□□□□ -0.48
COL12A1-207ENST00000483888 DACH1Q9UI36 760 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms