RNA–Protein interactions for RNA: ENST00000483873.6

GTF3C4-202, Transcript of general transcription factor IIIC subunit 4, humanhuman

TSL 3 BASIC

Gene GTF3C4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4-202ENST00000483873 C8orf37Q96NL8 207 aa37.25■■■■□ 3.55
GTF3C4-202ENST00000483873 USP6P35125 1406 aa37.23■■■■□ 3.55
GTF3C4-202ENST00000483873 MON2Q7Z3U7 1717 aa37.21■■■■□ 3.55
GTF3C4-202ENST00000483873 AFF2P51816 1311 aa37.19■■■■□ 3.54
GTF3C4-202ENST00000483873 NRKQ7Z2Y5 1582 aa37.19■■■■□ 3.54
GTF3C4-202ENST00000483873 PHRF1Q9P1Y6 1649 aaKnown RBP37.18■■■■□ 3.54
GTF3C4-202ENST00000483873 CD163L1Q9NR16 1453 aa37.18■■■■□ 3.54
GTF3C4-202ENST00000483873 CPSF1Q10570 1443 aaKnown RBP37.18■■■■□ 3.54
GTF3C4-202ENST00000483873 SLC24A1O60721 1099 aa37.18■■■■□ 3.54
GTF3C4-202ENST00000483873 TMF1P82094 1093 aa37.18■■■■□ 3.54
GTF3C4-202ENST00000483873 POTEAQ6S8J7 498 aa37.18■■■■□ 3.54
GTF3C4-202ENST00000483873 PUS7Q96PZ0 661 aaKnown RBP37.18■■■■□ 3.54
GTF3C4-202ENST00000483873 TMC1Q8TDI8 760 aa37.17■■■■□ 3.54
GTF3C4-202ENST00000483873 SSH2Q76I76 1423 aa37.16■■■■□ 3.54
GTF3C4-202ENST00000483873 HAP1P54257 671 aaPredicted RBP37.16■■■■□ 3.54
GTF3C4-202ENST00000483873 NUTM2GQ5VZR2 741 aa37.16■■■■□ 3.54
GTF3C4-202ENST00000483873 NGLY1Q96IV0 654 aa37.15■■■■□ 3.54
GTF3C4-202ENST00000483873 SLC12A5Q9H2X9 1139 aa37.15■■■■□ 3.54
GTF3C4-202ENST00000483873 PIK3C2AO00443 1686 aa37.14■■■■□ 3.54
GTF3C4-202ENST00000483873 BRD4O60885 1362 aaPredicted RBP37.14■■■■□ 3.54
GTF3C4-202ENST00000483873 HSPA5P11021 654 aaKnown RBP37.13■■■■□ 3.53
GTF3C4-202ENST00000483873 EIF4G2P78344 907 aaKnown RBP eCLIP37.13■■■■□ 3.53
GTF3C4-202ENST00000483873 ABTB2Q8N961 1025 aa37.11■■■■□ 3.53
GTF3C4-202ENST00000483873 KTN1Q86UP2 1357 aaKnown RBP37.11■■■■□ 3.53
GTF3C4-202ENST00000483873 ZNF692Q9BU19 519 aaPredicted RBP37.1■■■■□ 3.53
GTF3C4-202ENST00000483873 ZNF772Q68DY9 489 aaPredicted RBP37.1■■■■□ 3.53
GTF3C4-202ENST00000483873 PLCH1Q4KWH8 1693 aa37.08■■■■□ 3.53
GTF3C4-202ENST00000483873 TTC21BQ7Z4L5 1316 aa37.06■■■■□ 3.52
GTF3C4-202ENST00000483873 MYOM1P52179 1685 aa37.06■■■■□ 3.52
GTF3C4-202ENST00000483873 A0A1W2PP64 1363 aa37.06■■■■□ 3.52
GTF3C4-202ENST00000483873 FNBP4Q8N3X1 1017 aaPredicted RBP37.05■■■■□ 3.52
GTF3C4-202ENST00000483873 NINLQ9Y2I6 1382 aa37.04■■■■□ 3.52
GTF3C4-202ENST00000483873 HDGFL2Q7Z4V5 671 aaPredicted RBP37.02■■■■□ 3.52
GTF3C4-202ENST00000483873 USP21Q9UK80 565 aa37.02■■■■□ 3.52
GTF3C4-202ENST00000483873 SLIT2O94813 1529 aa37.01■■■■□ 3.52
GTF3C4-202ENST00000483873 USP19O94966 1318 aa37.01■■■■□ 3.52
GTF3C4-202ENST00000483873 BCL9LQ86UU0 1499 aa37.01■■■■□ 3.51
GTF3C4-202ENST00000483873 TNKS1BP1Q9C0C2 1729 aaKnown RBP37.01■■■■□ 3.51
GTF3C4-202ENST00000483873 CDCA8Q53HL2 280 aa37.01■■■■□ 3.51
GTF3C4-202ENST00000483873 TERF2IPQ9NYB0 399 aa37.01■■■■□ 3.51
GTF3C4-202ENST00000483873 NWD2Q9ULI1 1742 aa36.99■■■■□ 3.51
GTF3C4-202ENST00000483873 COL14A1Q05707 1796 aaKnown RBP36.99■■■■□ 3.51
GTF3C4-202ENST00000483873 NLRP13Q86W25 1043 aa36.99■■■■□ 3.51
GTF3C4-202ENST00000483873 TTC21AQ8NDW8 1320 aa36.99■■■■□ 3.51
GTF3C4-202ENST00000483873 NLRP6P59044 892 aa36.98■■■■□ 3.51
GTF3C4-202ENST00000483873 FAM83GA6ND36 823 aa36.97■■■■□ 3.51
GTF3C4-202ENST00000483873 SUGP2Q8IX01 1082 aaKnown RBP eCLIP36.97■■■■□ 3.51
GTF3C4-202ENST00000483873 EDC4Q6P2E9 1401 aaKnown RBP36.97■■■■□ 3.51
GTF3C4-202ENST00000483873 SLIT3O75094 1523 aa36.96■■■■□ 3.51
GTF3C4-202ENST00000483873 QTRT2Q9H974 415 aaKnown RBP36.95■■■■□ 3.51
GTF3C4-202ENST00000483873 ANKRD36BQ8N2N9 1353 aa36.95■■■■□ 3.5
GTF3C4-202ENST00000483873 NRAPQ86VF7 1730 aa36.94■■■■□ 3.5
GTF3C4-202ENST00000483873 KIAA0232Q92628 1395 aa36.94■■■■□ 3.5
GTF3C4-202ENST00000483873 USP54Q70EL1 1684 aa36.93■■■■□ 3.5
GTF3C4-202ENST00000483873 ATRNO75882 1429 aa36.93■■■■□ 3.5
GTF3C4-202ENST00000483873 ZC3H6P61129 1189 aaKnown RBP36.93■■■■□ 3.5
GTF3C4-202ENST00000483873 ZRANB1Q9UGI0 708 aa36.91■■■■□ 3.5
GTF3C4-202ENST00000483873 GCP02774 474 aa36.9■■■■□ 3.5
GTF3C4-202ENST00000483873 NME9Q86XW9 330 aa36.9■■■■□ 3.5
GTF3C4-202ENST00000483873 POLR3GLQ9BT43 218 aa36.9■■■■□ 3.5
GTF3C4-202ENST00000483873 PRDM11Q9NQV5 511 aa36.9■■■■□ 3.5
GTF3C4-202ENST00000483873 UNC5CLQ8IV45 518 aa36.89■■■■□ 3.5
GTF3C4-202ENST00000483873 CHRNA2Q15822 529 aa36.88■■■■□ 3.49
GTF3C4-202ENST00000483873 TRPC5Q9UL62 973 aaPredicted RBP36.88■■■■□ 3.49
GTF3C4-202ENST00000483873 RXRBP28702 533 aa36.87■■■■□ 3.49
GTF3C4-202ENST00000483873 C11orf95C9JLR9 678 aaPredicted RBP36.86■■■■□ 3.49
GTF3C4-202ENST00000483873 BTG4Q9NY30 223 aa36.85■■■■□ 3.49
GTF3C4-202ENST00000483873 USP31Q70CQ4 1352 aa36.85■■■■□ 3.49
GTF3C4-202ENST00000483873 CPDO75976 1380 aa36.84■■■■□ 3.49
GTF3C4-202ENST00000483873 LMO7Q8WWI1 1683 aa36.83■■■■□ 3.49
GTF3C4-202ENST00000483873 RBM6P78332 1123 aaKnown RBP36.83■■■■□ 3.49
GTF3C4-202ENST00000483873 NFAT5O94916 1531 aa36.81■■■■□ 3.48
GTF3C4-202ENST00000483873 GLI3P10071 1580 aa36.81■■■■□ 3.48
GTF3C4-202ENST00000483873 SOX12O15370 315 aa36.8■■■■□ 3.48
GTF3C4-202ENST00000483873 KIF20BQ96Q89 1820 aa36.8■■■■□ 3.48
GTF3C4-202ENST00000483873 OVOS2A0A0J9YW53 1432 aa36.79■■■■□ 3.48
GTF3C4-202ENST00000483873 OVOS2Q6IE36 1432 aa36.79■■■■□ 3.48
GTF3C4-202ENST00000483873 CDK12Q9NYV4 1490 aaPredicted RBP36.78■■■■□ 3.48
GTF3C4-202ENST00000483873 CAMTA1Q9Y6Y1 1673 aa36.77■■■■□ 3.48
GTF3C4-202ENST00000483873 RGS12O14924 1447 aa36.77■■■■□ 3.48
GTF3C4-202ENST00000483873 COL18A1P39060 1754 aa36.77■■■■□ 3.48
GTF3C4-202ENST00000483873 ZBTB7CA1YPR0 619 aa36.76■■■■□ 3.48
GTF3C4-202ENST00000483873 GJD4Q96KN9 370 aaPredicted RBP36.76■■■■□ 3.47
GTF3C4-202ENST00000483873 CARD14Q9BXL6 1004 aa36.76■■■■□ 3.47
GTF3C4-202ENST00000483873 VPS72Q15906 364 aa36.75■■■■□ 3.47
GTF3C4-202ENST00000483873 KCNH5Q8NCM2 988 aa36.75■■■■□ 3.47
GTF3C4-202ENST00000483873 NSD3Q9BZ95 1437 aa36.74■■■■□ 3.47
GTF3C4-202ENST00000483873 LTN1O94822 1766 aa36.74■■■■□ 3.47
GTF3C4-202ENST00000483873 RGPD5Q99666 1765 aa36.73■■■■□ 3.47
GTF3C4-202ENST00000483873 CCDC9Q9Y3X0 531 aaKnown RBP36.71■■■■□ 3.47
GTF3C4-202ENST00000483873 KIF7Q2M1P5 1343 aa36.7■■■■□ 3.47
GTF3C4-202ENST00000483873 ARHGEF25Q86VW2 580 aa36.69■■■■□ 3.46
GTF3C4-202ENST00000483873 STRN4Q9NRL3 753 aa36.68■■■■□ 3.46
GTF3C4-202ENST00000483873 AATKQ6ZMQ8 1374 aa36.68■■■■□ 3.46
GTF3C4-202ENST00000483873 FYB1O15117 783 aa36.68■■■■□ 3.46
GTF3C4-202ENST00000483873 GGNBP2Q9H3C7 697 aa36.67■■■■□ 3.46
GTF3C4-202ENST00000483873 COG3Q96JB2 828 aa36.66■■■■□ 3.46
GTF3C4-202ENST00000483873 COL5A2P05997 1499 aaPredicted RBP36.65■■■■□ 3.46
GTF3C4-202ENST00000483873 SPATA31A5Q5VU36 1347 aa36.62■■■■□ 3.45
GTF3C4-202ENST00000483873 SPATA31A7Q8IWB4 1347 aa36.62■■■■□ 3.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms