RNA–Protein interactions for RNA: ENST00000483763.5

CDC42SE1-204, Transcript of CDC42 small effector 1, humanhuman

TSL 1 (best)

Gene CDC42SE1, Length 2,379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-204ENST00000483763 ATP7BP35670 1465 aa11.72□□□□□ -0.53
CDC42SE1-204ENST00000483763 SHPRHQ149N8 1683 aa11.72□□□□□ -0.53
CDC42SE1-204ENST00000483763 SPINK5Q9NQ38 1064 aaPredicted RBP11.71□□□□□ -0.53
CDC42SE1-204ENST00000483763 KCNA6P17658 529 aa11.71□□□□□ -0.54
CDC42SE1-204ENST00000483763 STRCP1A6NGW2 1772 aa11.7□□□□□ -0.54
CDC42SE1-204ENST00000483763 NME9Q86XW9 330 aa11.7□□□□□ -0.54
CDC42SE1-204ENST00000483763 LTBP4Q8N2S1 1624 aa11.7□□□□□ -0.54
CDC42SE1-204ENST00000483763 RCAN3Q9UKA8 241 aa11.7□□□□□ -0.54
CDC42SE1-204ENST00000483763 UBAP1LF5GYI3 381 aa11.69□□□□□ -0.54
CDC42SE1-204ENST00000483763 DUSP27Q5VZP5 1158 aa11.69□□□□□ -0.54
CDC42SE1-204ENST00000483763 DIP2AQ14689 1571 aa11.69□□□□□ -0.54
CDC42SE1-204ENST00000483763 FBXO41Q8TF61 875 aa11.69□□□□□ -0.54
CDC42SE1-204ENST00000483763 CFAP53Q96M91 514 aa11.68□□□□□ -0.54
CDC42SE1-204ENST00000483763 RRP7AQ9Y3A4 280 aaKnown RBP11.68□□□□□ -0.54
CDC42SE1-204ENST00000483763 EDC4Q6P2E9 1401 aaKnown RBP11.68□□□□□ -0.54
CDC42SE1-204ENST00000483763 ARXQ96QS3 562 aa11.68□□□□□ -0.54
CDC42SE1-204ENST00000483763 POLKQ9UBT6 870 aa11.68□□□□□ -0.54
CDC42SE1-204ENST00000483763 PTCH1Q13635 1447 aa11.67□□□□□ -0.54
CDC42SE1-204ENST00000483763 U2AF1L5P0DN76 240 aaPredicted RBP11.67□□□□□ -0.54
CDC42SE1-204ENST00000483763 U2AF1Q01081 240 aaKnown RBP eCLIP11.67□□□□□ -0.54
CDC42SE1-204ENST00000483763 GOLGA2Q08379 1002 aa11.67□□□□□ -0.54
CDC42SE1-204ENST00000483763 NEUROD2Q15784 382 aa11.67□□□□□ -0.54
CDC42SE1-204ENST00000483763 ACEP12821 1306 aa11.67□□□□□ -0.54
CDC42SE1-204ENST00000483763 ADGRB2O60241 1585 aa11.67□□□□□ -0.54
CDC42SE1-204ENST00000483763 CDC42BPGQ6DT37 1551 aa11.67□□□□□ -0.54
CDC42SE1-204ENST00000483763 COL3A1P02461 1466 aaPredicted RBP11.67□□□□□ -0.54
CDC42SE1-204ENST00000483763 TCP11L2Q8N4U5 519 aa11.67□□□□□ -0.54
CDC42SE1-204ENST00000483763 PNPLA6Q8IY17 1366 aa11.66□□□□□ -0.54
CDC42SE1-204ENST00000483763 NKTRP30414 1462 aaKnown RBP11.66□□□□□ -0.54
CDC42SE1-204ENST00000483763 PPM1GO15355 546 aaPredicted RBP11.66□□□□□ -0.54
CDC42SE1-204ENST00000483763 SLFN5Q08AF3 891 aa11.66□□□□□ -0.54
CDC42SE1-204ENST00000483763 WWC1Q8IX03 1113 aa11.66□□□□□ -0.54
CDC42SE1-204ENST00000483763 RUNDC1Q96C34 613 aa11.66□□□□□ -0.54
CDC42SE1-204ENST00000483763 PLEKHG3A1L390 1219 aa11.65□□□□□ -0.54
CDC42SE1-204ENST00000483763 RRP1P56182 461 aaKnown RBP11.65□□□□□ -0.54
CDC42SE1-204ENST00000483763 ERICH6BQ5W0A0 696 aa11.65□□□□□ -0.54
CDC42SE1-204ENST00000483763 B4GALNT3Q6L9W6 998 aa11.65□□□□□ -0.54
CDC42SE1-204ENST00000483763 PROSER2Q86WR7 435 aaPredicted RBP11.65□□□□□ -0.54
CDC42SE1-204ENST00000483763 TRMT2AQ8IZ69 625 aaKnown RBP11.65□□□□□ -0.54
CDC42SE1-204ENST00000483763 ANKRD26Q9UPS8 1709 aa11.65□□□□□ -0.54
CDC42SE1-204ENST00000483763 PMFBP1Q8TBY8 1022 aa11.65□□□□□ -0.54
CDC42SE1-204ENST00000483763 PPP4R2Q9NY27 417 aa11.65□□□□□ -0.54
CDC42SE1-204ENST00000483763 EMILIN1Q9Y6C2 1016 aa11.65□□□□□ -0.54
CDC42SE1-204ENST00000483763 XRN1Q8IZH2 1706 aaKnown RBP11.65□□□□□ -0.55
CDC42SE1-204ENST00000483763 KIF20BQ96Q89 1820 aa11.65□□□□□ -0.55
CDC42SE1-204ENST00000483763 U2SURPO15042 1029 aaKnown RBP11.64□□□□□ -0.55
CDC42SE1-204ENST00000483763 PLIN1O60240 522 aa11.64□□□□□ -0.55
CDC42SE1-204ENST00000483763 ZNF692Q9BU19 519 aaPredicted RBP11.64□□□□□ -0.55
CDC42SE1-204ENST00000483763 PLEKHF1Q96S99 279 aa11.64□□□□□ -0.55
CDC42SE1-204ENST00000483763 PIK3R4Q99570 1358 aa11.64□□□□□ -0.55
CDC42SE1-204ENST00000483763 IQSEC2Q5JU85 1478 aa11.63□□□□□ -0.55
CDC42SE1-204ENST00000483763 TULP1O00294 542 aaPredicted RBP11.63□□□□□ -0.55
CDC42SE1-204ENST00000483763 RRS1Q15050 365 aaKnown RBP11.63□□□□□ -0.55
CDC42SE1-204ENST00000483763 TTC21BQ7Z4L5 1316 aa11.63□□□□□ -0.55
CDC42SE1-204ENST00000483763 MON2Q7Z3U7 1717 aa11.63□□□□□ -0.55
CDC42SE1-204ENST00000483763 DIAPH1O60610 1272 aaKnown RBP11.62□□□□□ -0.55
CDC42SE1-204ENST00000483763 TOPAZ1Q8N9V7 1692 aa11.62□□□□□ -0.55
CDC42SE1-204ENST00000483763 COG3Q96JB2 828 aa11.62□□□□□ -0.55
CDC42SE1-204ENST00000483763 CHD2O14647 1828 aaKnown RBP11.62□□□□□ -0.55
CDC42SE1-204ENST00000483763 AKAP12Q02952 1782 aa11.61□□□□□ -0.55
CDC42SE1-204ENST00000483763 USP6P35125 1406 aa11.61□□□□□ -0.55
CDC42SE1-204ENST00000483763 C14orf37Q86TY3 774 aa11.61□□□□□ -0.55
CDC42SE1-204ENST00000483763 SSH2Q76I76 1423 aa11.6□□□□□ -0.55
CDC42SE1-204ENST00000483763 LRRC7Q96NW7 1537 aa11.6□□□□□ -0.55
CDC42SE1-204ENST00000483763 E9PSI1 815 aa11.6□□□□□ -0.55
CDC42SE1-204ENST00000483763 NGEFQ8N5V2 710 aa11.6□□□□□ -0.55
CDC42SE1-204ENST00000483763 TAOK2Q9UL54 1235 aa11.6□□□□□ -0.55
CDC42SE1-204ENST00000483763 TMEM94Q12767 1356 aa11.6□□□□□ -0.55
CDC42SE1-204ENST00000483763 MAP2P11137 1827 aaKnown RBP11.6□□□□□ -0.55
CDC42SE1-204ENST00000483763 C20orf194Q5TEA3 1177 aa11.6□□□□□ -0.55
CDC42SE1-204ENST00000483763 EXOC6Q8TAG9 804 aa11.6□□□□□ -0.55
CDC42SE1-204ENST00000483763 RGPD8O14715 1765 aaPredicted RBP11.6□□□□□ -0.55
CDC42SE1-204ENST00000483763 AATKQ6ZMQ8 1374 aa11.59□□□□□ -0.55
CDC42SE1-204ENST00000483763 ITSN1Q15811 1721 aa11.59□□□□□ -0.55
CDC42SE1-204ENST00000483763 NRKQ7Z2Y5 1582 aa11.59□□□□□ -0.55
CDC42SE1-204ENST00000483763 IL13P35225 146 aa11.59□□□□□ -0.55
CDC42SE1-204ENST00000483763 NGDNQ8NEJ9 315 aaKnown RBP11.59□□□□□ -0.55
CDC42SE1-204ENST00000483763 HMOX1P09601 288 aa11.58□□□□□ -0.56
CDC42SE1-204ENST00000483763 HSPA1LP34931 641 aa11.58□□□□□ -0.56
CDC42SE1-204ENST00000483763 TMPOP42166 694 aaKnown RBP11.58□□□□□ -0.56
CDC42SE1-204ENST00000483763 CCDC27Q2M243 656 aa11.58□□□□□ -0.56
CDC42SE1-204ENST00000483763 TSHZ2Q9NRE2 1034 aa11.58□□□□□ -0.56
CDC42SE1-204ENST00000483763 OVOS2A0A0J9YW53 1432 aa11.58□□□□□ -0.56
CDC42SE1-204ENST00000483763 OVOS2Q6IE36 1432 aa11.58□□□□□ -0.56
CDC42SE1-204ENST00000483763 SOX12O15370 315 aa11.57□□□□□ -0.56
CDC42SE1-204ENST00000483763 TRIM35Q9UPQ4 493 aa11.57□□□□□ -0.56
CDC42SE1-204ENST00000483763 XIRP1Q702N8 1843 aaKnown RBP11.57□□□□□ -0.56
CDC42SE1-204ENST00000483763 BCAR3O75815 825 aa11.57□□□□□ -0.56
CDC42SE1-204ENST00000483763 PHACTR3Q96KR7 559 aa11.57□□□□□ -0.56
CDC42SE1-204ENST00000483763 RSPH6AQ9H0K4 717 aa11.57□□□□□ -0.56
CDC42SE1-204ENST00000483763 FCHSD2O94868 740 aa11.56□□□□□ -0.56
CDC42SE1-204ENST00000483763 PRKAR2BP31323 418 aa11.56□□□□□ -0.56
CDC42SE1-204ENST00000483763 WDR63Q8IWG1 891 aa11.56□□□□□ -0.56
CDC42SE1-204ENST00000483763 CDK12Q9NYV4 1490 aaPredicted RBP11.55□□□□□ -0.56
CDC42SE1-204ENST00000483763 TOM1O60784 492 aa11.55□□□□□ -0.56
CDC42SE1-204ENST00000483763 HSP90AB2PQ58FF8 381 aa11.55□□□□□ -0.56
CDC42SE1-204ENST00000483763 DDX17Q92841 729 aaKnown RBP11.55□□□□□ -0.56
CDC42SE1-204ENST00000483763 CCDC136Q96JN2 1154 aa11.55□□□□□ -0.56
CDC42SE1-204ENST00000483763 NALCNQ8IZF0 1738 aa11.55□□□□□ -0.56
CDC42SE1-204ENST00000483763 ANKARQ7Z5J8 1434 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms