RNA–Protein interactions for RNA: ENST00000483645.5

MSL3-216, Transcript of MSL complex subunit 3, humanhuman

TSL 4

Gene MSL3, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-216ENST00000483645 MAP10Q9P2G4 905 aa9.22□□□□□ -0.93
MSL3-216ENST00000483645 PKD2L1Q9P0L9 805 aa9.21□□□□□ -0.94
MSL3-216ENST00000483645 LINC01559Q495D7 138 aa9.2□□□□□ -0.94
MSL3-216ENST00000483645 TMEM259Q4ZIN3 620 aa9.2□□□□□ -0.94
MSL3-216ENST00000483645 PKDCCQ504Y2 493 aa9.2□□□□□ -0.94
MSL3-216ENST00000483645 RC3H1Q5TC82 1133 aaKnown RBP9.2□□□□□ -0.94
MSL3-216ENST00000483645 EHBP1Q8NDI1 1231 aa9.2□□□□□ -0.94
MSL3-216ENST00000483645 BAP1Q92560 729 aa9.2□□□□□ -0.94
MSL3-216ENST00000483645 TTC24A2A3L6 582 aaPredicted RBP9.19□□□□□ -0.94
MSL3-216ENST00000483645 ZNF511Q8NB15 262 aa9.19□□□□□ -0.94
MSL3-216ENST00000483645 SH3BP2P78314 561 aa9.18□□□□□ -0.94
MSL3-216ENST00000483645 SKOR1P84550 965 aa9.18□□□□□ -0.94
MSL3-216ENST00000483645 NBPF14Q5TI25 921 aa9.18□□□□□ -0.94
MSL3-216ENST00000483645 PNMA1Q8ND90 353 aa9.18□□□□□ -0.94
MSL3-216ENST00000483645 MRGPRX2Q96LB1 330 aa9.18□□□□□ -0.94
MSL3-216ENST00000483645 FAM187AA6NFU0 413 aa9.17□□□□□ -0.94
MSL3-216ENST00000483645 USP17L8P0C7I0 530 aa9.17□□□□□ -0.94
MSL3-216ENST00000483645 AGERQ15109 404 aa9.17□□□□□ -0.94
MSL3-216ENST00000483645 FBXO31Q5XUX0 539 aaPredicted RBP9.17□□□□□ -0.94
MSL3-216ENST00000483645 SNIP1Q8TAD8 396 aaKnown RBP9.17□□□□□ -0.94
MSL3-216ENST00000483645 DGAT1O75907 488 aa9.16□□□□□ -0.94
MSL3-216ENST00000483645 LRRN4Q8WUT4 740 aa9.16□□□□□ -0.94
MSL3-216ENST00000483645 VARSP26640 1264 aaKnown RBP9.15□□□□□ -0.94
MSL3-216ENST00000483645 BPHLQ86WA6 291 aaPredicted RBP9.15□□□□□ -0.94
MSL3-216ENST00000483645 GPKOWQ92917 476 aaPredicted RBP eCLIP9.14□□□□□ -0.95
MSL3-216ENST00000483645 TOR4AQ9NXH8 423 aa9.14□□□□□ -0.95
MSL3-216ENST00000483645 NR6A1Q15406 480 aa9.13□□□□□ -0.95
MSL3-216ENST00000483645 TRAF7Q6Q0C0 670 aa9.12□□□□□ -0.95
MSL3-216ENST00000483645 FAM174AQ8TBP5 190 aa9.12□□□□□ -0.95
MSL3-216ENST00000483645 APBB1O00213 710 aa9.11□□□□□ -0.95
MSL3-216ENST00000483645 ALDH1A1P00352 501 aa9.11□□□□□ -0.95
MSL3-216ENST00000483645 BANK1Q8NDB2 785 aa9.11□□□□□ -0.95
MSL3-216ENST00000483645 FKBPLQ9UIM3 349 aa9.11□□□□□ -0.95
MSL3-216ENST00000483645 ZC3H4Q9UPT8 1303 aaKnown RBP9.1□□□□□ -0.95
MSL3-216ENST00000483645 FOXJ1Q92949 421 aa9.1□□□□□ -0.95
MSL3-216ENST00000483645 WASF2Q9Y6W5 498 aa9.1□□□□□ -0.95
MSL3-216ENST00000483645 MAGEB6P1A0A0J9YX57 407 aa9.08□□□□□ -0.96
MSL3-216ENST00000483645 PDXDC2PQ6P474 469 aa9.08□□□□□ -0.96
MSL3-216ENST00000483645 HMX1Q9NP08 348 aaPredicted RBP9.08□□□□□ -0.96
MSL3-216ENST00000483645 J3QL48 77 aa9.07□□□□□ -0.96
MSL3-216ENST00000483645 SIAH2O43255 324 aa9.07□□□□□ -0.96
MSL3-216ENST00000483645 SMPD1P17405 629 aa9.07□□□□□ -0.96
MSL3-216ENST00000483645 PTK2Q05397 1052 aa9.07□□□□□ -0.96
MSL3-216ENST00000483645 ARHGAP9Q9BRR9 750 aa9.07□□□□□ -0.96
MSL3-216ENST00000483645 ARID5BQ14865 1188 aa9.06□□□□□ -0.96
MSL3-216ENST00000483645 ZBTB33Q86T24 672 aa9.06□□□□□ -0.96
MSL3-216ENST00000483645 MPNDQ8N594 471 aa9.06□□□□□ -0.96
MSL3-216ENST00000483645 CARD14Q9BXL6 1004 aa9.06□□□□□ -0.96
MSL3-216ENST00000483645 MYT1Q01538 1121 aa9.05□□□□□ -0.96
MSL3-216ENST00000483645 CTC1Q2NKJ3 1217 aa9.05□□□□□ -0.96
MSL3-216ENST00000483645 SH3BP5LQ7L8J4 393 aa9.05□□□□□ -0.96
MSL3-216ENST00000483645 PRM3Q9NNZ6 103 aa9.05□□□□□ -0.96
MSL3-216ENST00000483645 GPSM3Q9Y4H4 160 aa9.05□□□□□ -0.96
MSL3-216ENST00000483645 TLL2Q9Y6L7 1015 aa9.05□□□□□ -0.96
MSL3-216ENST00000483645 AVPP01185 164 aa9.04□□□□□ -0.96
MSL3-216ENST00000483645 SH3RF1Q7Z6J0 888 aa9.04□□□□□ -0.96
MSL3-216ENST00000483645 EPS8L1Q8TE68 723 aa9.04□□□□□ -0.96
MSL3-216ENST00000483645 SOCS7O14512 581 aa9.03□□□□□ -0.96
MSL3-216ENST00000483645 AXIN1O15169 862 aa9.03□□□□□ -0.96
MSL3-216ENST00000483645 C4orf48Q5BLP8 95 aa9.03□□□□□ -0.96
MSL3-216ENST00000483645 ADH1CP00326 375 aa9.02□□□□□ -0.97
MSL3-216ENST00000483645 TMEM132AQ24JP5 1023 aa9.02□□□□□ -0.97
MSL3-216ENST00000483645 CRIPAKQ8N1N5 446 aa9.02□□□□□ -0.97
MSL3-216ENST00000483645 TRIM34Q9BYJ4 488 aa9.02□□□□□ -0.97
MSL3-216ENST00000483645 NDUFB9Q9Y6M9 179 aa9.02□□□□□ -0.97
MSL3-216ENST00000483645 VASH1Q7L8A9 365 aaPredicted RBP9.01□□□□□ -0.97
MSL3-216ENST00000483645 TRMT44Q8IYL2 757 aaKnown RBP9.01□□□□□ -0.97
MSL3-216ENST00000483645 HPS1Q92902 700 aa9.01□□□□□ -0.97
MSL3-216ENST00000483645 SLC10A4Q96EP9 437 aa9.01□□□□□ -0.97
MSL3-216ENST00000483645 CDK15Q96Q40 435 aa9.01□□□□□ -0.97
MSL3-216ENST00000483645 C1QTNF2Q9BXJ5 285 aa9.01□□□□□ -0.97
MSL3-216ENST00000483645 CDV3Q9UKY7 258 aaKnown RBP9.01□□□□□ -0.97
MSL3-216ENST00000483645 SMCPP49901 116 aaPredicted RBP9□□□□□ -0.97
MSL3-216ENST00000483645 NR5A1Q13285 461 aa9□□□□□ -0.97
MSL3-216ENST00000483645 NNTQ13423 1086 aa9□□□□□ -0.97
MSL3-216ENST00000483645 GJD4Q96KN9 370 aaPredicted RBP9□□□□□ -0.97
MSL3-216ENST00000483645 AAASQ9NRG9 546 aa9□□□□□ -0.97
MSL3-216ENST00000483645 SNRKQ9NRH2 765 aa9□□□□□ -0.97
MSL3-216ENST00000483645 ST8SIA5O15466 376 aa8.99□□□□□ -0.97
MSL3-216ENST00000483645 ERFEQ4G0M1 354 aa8.99□□□□□ -0.97
MSL3-216ENST00000483645 MTMR14Q8NCE2 650 aa8.99□□□□□ -0.97
MSL3-216ENST00000483645 MAP4K5Q9Y4K4 846 aa8.99□□□□□ -0.97
MSL3-216ENST00000483645 ADAM32Q8TC27 787 aa8.98□□□□□ -0.97
MSL3-216ENST00000483645 ZBBXA8MT70 800 aa8.97□□□□□ -0.97
MSL3-216ENST00000483645 LCE2BO14633 110 aa8.97□□□□□ -0.97
MSL3-216ENST00000483645 DZIP3Q86Y13 1208 aaKnown RBP8.97□□□□□ -0.97
MSL3-216ENST00000483645 ZNF330Q9Y3S2 320 aaPredicted RBP8.97□□□□□ -0.97
MSL3-216ENST00000483645 CAPN5O15484 640 aaPredicted RBP8.96□□□□□ -0.98
MSL3-216ENST00000483645 FSHRP23945 695 aa8.96□□□□□ -0.98
MSL3-216ENST00000483645 NBPF20Q3BBV1 942 aa8.96□□□□□ -0.98
MSL3-216ENST00000483645 ZNF592Q92610 1267 aa8.96□□□□□ -0.98
MSL3-216ENST00000483645 GRM5P41594 1212 aa8.94□□□□□ -0.98
MSL3-216ENST00000483645 WDR4P57081 412 aaKnown RBP8.94□□□□□ -0.98
MSL3-216ENST00000483645 ZNF787Q6DD87 383 aa8.94□□□□□ -0.98
MSL3-216ENST00000483645 KCTD15Q96SI1 283 aaPredicted RBP8.94□□□□□ -0.98
MSL3-216ENST00000483645 CCDC116Q8IYX3 515 aa8.93□□□□□ -0.98
MSL3-216ENST00000483645 OCSTAMPQ9BR26 566 aa8.93□□□□□ -0.98
MSL3-216ENST00000483645 MCCD1P59942 119 aaPredicted RBP8.92□□□□□ -0.98
MSL3-216ENST00000483645 DHX9Q08211 1270 aaKnown RBP8.92□□□□□ -0.98
MSL3-216ENST00000483645 NR1H3Q13133 447 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms