RNA–Protein interactions for RNA: ENST00000483409.1

SSR1-208, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4

Gene SSR1, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-208ENST00000483409 AFF2P51816 1311 aa18.84■□□□□ 0.61
SSR1-208ENST00000483409 HAP1P54257 671 aaPredicted RBP18.84■□□□□ 0.61
SSR1-208ENST00000483409 USP6P35125 1406 aa18.83■□□□□ 0.6
SSR1-208ENST00000483409 POTEAQ6S8J7 498 aa18.82■□□□□ 0.6
SSR1-208ENST00000483409 NGLY1Q96IV0 654 aa18.82■□□□□ 0.6
SSR1-208ENST00000483409 MON2Q7Z3U7 1717 aa18.82■□□□□ 0.6
SSR1-208ENST00000483409 PHRF1Q9P1Y6 1649 aaKnown RBP18.82■□□□□ 0.6
SSR1-208ENST00000483409 NUTM2GQ5VZR2 741 aa18.81■□□□□ 0.6
SSR1-208ENST00000483409 NRKQ7Z2Y5 1582 aa18.81■□□□□ 0.6
SSR1-208ENST00000483409 ZNF772Q68DY9 489 aaPredicted RBP18.8■□□□□ 0.6
SSR1-208ENST00000483409 TMC1Q8TDI8 760 aa18.8■□□□□ 0.6
SSR1-208ENST00000483409 TMF1P82094 1093 aa18.79■□□□□ 0.6
SSR1-208ENST00000483409 PIK3C2AO00443 1686 aa18.79■□□□□ 0.6
SSR1-208ENST00000483409 PLCH1Q4KWH8 1693 aa18.79■□□□□ 0.6
SSR1-208ENST00000483409 CPSF1Q10570 1443 aaKnown RBP18.78■□□□□ 0.6
SSR1-208ENST00000483409 SLC24A1O60721 1099 aa18.78■□□□□ 0.6
SSR1-208ENST00000483409 ABTB2Q8N961 1025 aa18.78■□□□□ 0.6
SSR1-208ENST00000483409 CD163L1Q9NR16 1453 aa18.77■□□□□ 0.6
SSR1-208ENST00000483409 PUS7Q96PZ0 661 aaKnown RBP18.77■□□□□ 0.6
SSR1-208ENST00000483409 SLC12A5Q9H2X9 1139 aa18.77■□□□□ 0.6
SSR1-208ENST00000483409 BRD4O60885 1362 aaPredicted RBP18.77■□□□□ 0.6
SSR1-208ENST00000483409 KTN1Q86UP2 1357 aaKnown RBP18.77■□□□□ 0.6
SSR1-208ENST00000483409 SSH2Q76I76 1423 aa18.76■□□□□ 0.59
SSR1-208ENST00000483409 EIF4G2P78344 907 aaKnown RBP eCLIP18.75■□□□□ 0.59
SSR1-208ENST00000483409 ZNF692Q9BU19 519 aaPredicted RBP18.75■□□□□ 0.59
SSR1-208ENST00000483409 USP21Q9UK80 565 aa18.75■□□□□ 0.59
SSR1-208ENST00000483409 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.74■□□□□ 0.59
SSR1-208ENST00000483409 NWD2Q9ULI1 1742 aa18.74■□□□□ 0.59
SSR1-208ENST00000483409 HSPA5P11021 654 aaKnown RBP18.74■□□□□ 0.59
SSR1-208ENST00000483409 FNBP4Q8N3X1 1017 aaPredicted RBP18.74■□□□□ 0.59
SSR1-208ENST00000483409 TTC21BQ7Z4L5 1316 aa18.74■□□□□ 0.59
SSR1-208ENST00000483409 COL14A1Q05707 1796 aaKnown RBP18.73■□□□□ 0.59
SSR1-208ENST00000483409 MYOM1P52179 1685 aa18.73■□□□□ 0.59
SSR1-208ENST00000483409 A0A1W2PP64 1363 aa18.73■□□□□ 0.59
SSR1-208ENST00000483409 HDGFL2Q7Z4V5 671 aaPredicted RBP18.73■□□□□ 0.59
SSR1-208ENST00000483409 NINLQ9Y2I6 1382 aa18.72■□□□□ 0.59
SSR1-208ENST00000483409 QTRT2Q9H974 415 aaKnown RBP18.72■□□□□ 0.59
SSR1-208ENST00000483409 SLIT2O94813 1529 aa18.72■□□□□ 0.59
SSR1-208ENST00000483409 BCL9LQ86UU0 1499 aa18.71■□□□□ 0.59
SSR1-208ENST00000483409 NLRP6P59044 892 aa18.71■□□□□ 0.59
SSR1-208ENST00000483409 NLRP13Q86W25 1043 aa18.71■□□□□ 0.59
SSR1-208ENST00000483409 TERF2IPQ9NYB0 399 aa18.71■□□□□ 0.59
SSR1-208ENST00000483409 NRAPQ86VF7 1730 aa18.71■□□□□ 0.59
SSR1-208ENST00000483409 USP19O94966 1318 aa18.71■□□□□ 0.59
SSR1-208ENST00000483409 FAM83GA6ND36 823 aa18.7■□□□□ 0.58
SSR1-208ENST00000483409 CDCA8Q53HL2 280 aa18.7■□□□□ 0.58
SSR1-208ENST00000483409 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.7■□□□□ 0.582e-7■□□□□ 10
SSR1-208ENST00000483409 TTC21AQ8NDW8 1320 aa18.7■□□□□ 0.58
SSR1-208ENST00000483409 KIAA0232Q92628 1395 aa18.69■□□□□ 0.58
SSR1-208ENST00000483409 ATRNO75882 1429 aa18.69■□□□□ 0.58
SSR1-208ENST00000483409 EDC4Q6P2E9 1401 aaKnown RBP18.69■□□□□ 0.58
SSR1-208ENST00000483409 RXRBP28702 533 aa18.69■□□□□ 0.58
SSR1-208ENST00000483409 SLIT3O75094 1523 aa18.69■□□□□ 0.58
SSR1-208ENST00000483409 ZC3H6P61129 1189 aaKnown RBP18.68■□□□□ 0.58
SSR1-208ENST00000483409 UNC5CLQ8IV45 518 aa18.68■□□□□ 0.58
SSR1-208ENST00000483409 PRDM11Q9NQV5 511 aa18.68■□□□□ 0.58
SSR1-208ENST00000483409 TRPC5Q9UL62 973 aaPredicted RBP18.68■□□□□ 0.58
SSR1-208ENST00000483409 USP54Q70EL1 1684 aa18.67■□□□□ 0.58
SSR1-208ENST00000483409 POLR3GLQ9BT43 218 aa18.67■□□□□ 0.58
SSR1-208ENST00000483409 ANKRD36BQ8N2N9 1353 aa18.67■□□□□ 0.58
SSR1-208ENST00000483409 GCP02774 474 aa18.66■□□□□ 0.58
SSR1-208ENST00000483409 CHRNA2Q15822 529 aa18.66■□□□□ 0.58
SSR1-208ENST00000483409 NME9Q86XW9 330 aa18.66■□□□□ 0.58
SSR1-208ENST00000483409 RBM6P78332 1123 aaKnown RBP18.65■□□□□ 0.58
SSR1-208ENST00000483409 BTG4Q9NY30 223 aa18.65■□□□□ 0.58
SSR1-208ENST00000483409 ZRANB1Q9UGI0 708 aa18.65■□□□□ 0.58
SSR1-208ENST00000483409 SOX12O15370 315 aa18.64■□□□□ 0.57
SSR1-208ENST00000483409 KIF20BQ96Q89 1820 aa18.63■□□□□ 0.57
SSR1-208ENST00000483409 ZBTB7CA1YPR0 619 aa18.63■□□□□ 0.57
SSR1-208ENST00000483409 CPDO75976 1380 aa18.63■□□□□ 0.57
SSR1-208ENST00000483409 GLI3P10071 1580 aa18.63■□□□□ 0.57
SSR1-208ENST00000483409 LMO7Q8WWI1 1683 aa18.63■□□□□ 0.57
SSR1-208ENST00000483409 SOCS7O14512 581 aa18.62■□□□□ 0.57
SSR1-208ENST00000483409 RGS12O14924 1447 aa18.62■□□□□ 0.57
SSR1-208ENST00000483409 CDK12Q9NYV4 1490 aaPredicted RBP18.62■□□□□ 0.57
SSR1-208ENST00000483409 RGPD5Q99666 1765 aa18.62■□□□□ 0.57
SSR1-208ENST00000483409 LTN1O94822 1766 aa18.61■□□□□ 0.57
SSR1-208ENST00000483409 NFAT5O94916 1531 aa18.61■□□□□ 0.57
SSR1-208ENST00000483409 USP31Q70CQ4 1352 aa18.61■□□□□ 0.57
SSR1-208ENST00000483409 GJD4Q96KN9 370 aaPredicted RBP18.61■□□□□ 0.57
SSR1-208ENST00000483409 VPS72Q15906 364 aa18.6■□□□□ 0.57
SSR1-208ENST00000483409 CCDC9Q9Y3X0 531 aaKnown RBP18.6■□□□□ 0.57
SSR1-208ENST00000483409 COL18A1P39060 1754 aa18.6■□□□□ 0.57
SSR1-208ENST00000483409 CAMTA1Q9Y6Y1 1673 aa18.6■□□□□ 0.57
SSR1-208ENST00000483409 OVOS2A0A0J9YW53 1432 aa18.59■□□□□ 0.57
SSR1-208ENST00000483409 OVOS2Q6IE36 1432 aa18.59■□□□□ 0.57
SSR1-208ENST00000483409 C11orf95C9JLR9 678 aaPredicted RBP18.59■□□□□ 0.57
SSR1-208ENST00000483409 KCNH5Q8NCM2 988 aa18.58■□□□□ 0.56
SSR1-208ENST00000483409 STRN4Q9NRL3 753 aa18.58■□□□□ 0.56
SSR1-208ENST00000483409 NSD3Q9BZ95 1437 aa18.57■□□□□ 0.56
SSR1-208ENST00000483409 BRWD3Q6RI45 1802 aa18.56■□□□□ 0.56
SSR1-208ENST00000483409 CARD14Q9BXL6 1004 aa18.56■□□□□ 0.56
SSR1-208ENST00000483409 AATKQ6ZMQ8 1374 aa18.55■□□□□ 0.56
SSR1-208ENST00000483409 COL5A2P05997 1499 aaPredicted RBP18.54■□□□□ 0.56
SSR1-208ENST00000483409 EVA1CP58658 441 aa18.54■□□□□ 0.56
SSR1-208ENST00000483409 ARHGEF25Q86VW2 580 aa18.54■□□□□ 0.56
SSR1-208ENST00000483409 COG3Q96JB2 828 aa18.54■□□□□ 0.56
SSR1-208ENST00000483409 KIF7Q2M1P5 1343 aa18.53■□□□□ 0.56
SSR1-208ENST00000483409 FYB1O15117 783 aa18.53■□□□□ 0.56
SSR1-208ENST00000483409 GGNBP2Q9H3C7 697 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms