RNA–Protein interactions for RNA: ENST00000483031.1

RPA3-207, Transcript of replication protein A3, humanhuman

TSL 2

Gene RPA3, Length 641 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-207ENST00000483031 ZSCAN1Q8NBB4 408 aa9.27□□□□□ -0.93
RPA3-207ENST00000483031 SCARF1Q14162 830 aa9.26□□□□□ -0.93
RPA3-207ENST00000483031 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.26□□□□□ -0.93
RPA3-207ENST00000483031 ADH1CP00326 375 aa9.25□□□□□ -0.93
RPA3-207ENST00000483031 CTHP32929 405 aa9.25□□□□□ -0.93
RPA3-207ENST00000483031 MRPL14Q6P1L8 145 aaKnown RBP9.25□□□□□ -0.93
RPA3-207ENST00000483031 FAM174AQ8TBP5 190 aa9.24□□□□□ -0.93
RPA3-207ENST00000483031 TIMP2P16035 220 aa9.23□□□□□ -0.93
RPA3-207ENST00000483031 WDR4P57081 412 aaKnown RBP9.23□□□□□ -0.93
RPA3-207ENST00000483031 AMHR2Q16671 573 aa9.23□□□□□ -0.93
RPA3-207ENST00000483031 GIGYF2Q6Y7W6 1299 aaKnown RBP9.23□□□□□ -0.93
RPA3-207ENST00000483031 ERBB4Q15303 1308 aa9.23□□□□□ -0.93
RPA3-207ENST00000483031 LORP23490 312 aaPredicted RBP9.22□□□□□ -0.93
RPA3-207ENST00000483031 GJA5P36382 358 aa9.22□□□□□ -0.93
RPA3-207ENST00000483031 DIXDC1Q155Q3 683 aa9.22□□□□□ -0.93
RPA3-207ENST00000483031 BARGINQ6ZT62 677 aa9.22□□□□□ -0.93
RPA3-207ENST00000483031 PURBQ96QR8 312 aaKnown RBP9.22□□□□□ -0.93
RPA3-207ENST00000483031 BEGAINQ9BUH8 593 aa9.22□□□□□ -0.93
RPA3-207ENST00000483031 LYPD8Q6UX82 237 aa9.21□□□□□ -0.94
RPA3-207ENST00000483031 RSBN1LQ6PCB5 846 aaPredicted RBP9.2□□□□□ -0.94
RPA3-207ENST00000483031 TBC1D2Q9BYX2 928 aa9.2□□□□□ -0.94
RPA3-207ENST00000483031 ZMYND10O75800 440 aa9.18□□□□□ -0.94
RPA3-207ENST00000483031 ARID5BQ14865 1188 aa9.18□□□□□ -0.94
RPA3-207ENST00000483031 CDK15Q96Q40 435 aa9.18□□□□□ -0.94
RPA3-207ENST00000483031 KLF16Q9BXK1 252 aaPredicted RBP9.18□□□□□ -0.94
RPA3-207ENST00000483031 FOXJ1Q92949 421 aa9.17□□□□□ -0.94
RPA3-207ENST00000483031 ZBTB3Q9H5J0 574 aa9.17□□□□□ -0.94
RPA3-207ENST00000483031 SOBPA7XYQ1 873 aa9.16□□□□□ -0.94
RPA3-207ENST00000483031 CFAP99D6REC4 459 aa9.16□□□□□ -0.94
RPA3-207ENST00000483031 ZIC2O95409 532 aaPredicted RBP9.16□□□□□ -0.94
RPA3-207ENST00000483031 F12P00748 615 aaPredicted RBP9.16□□□□□ -0.94
RPA3-207ENST00000483031 MAP10Q9P2G4 905 aa9.16□□□□□ -0.94
RPA3-207ENST00000483031 PCDHB15Q9Y5E8 787 aa9.16□□□□□ -0.94
RPA3-207ENST00000483031 SPTLC1O15269 473 aa9.15□□□□□ -0.94
RPA3-207ENST00000483031 MAN1A2O60476 641 aa9.15□□□□□ -0.94
RPA3-207ENST00000483031 VSIG8P0DPA2 414 aa9.15□□□□□ -0.94
RPA3-207ENST00000483031 HRCP23327 699 aa9.15□□□□□ -0.94
RPA3-207ENST00000483031 NR5A1Q13285 461 aa9.15□□□□□ -0.94
RPA3-207ENST00000483031 AGERQ15109 404 aa9.15□□□□□ -0.94
RPA3-207ENST00000483031 PRPF38BQ5VTL8 546 aaKnown RBP9.14□□□□□ -0.95
RPA3-207ENST00000483031 ITPKCQ96DU7 683 aa9.14□□□□□ -0.95
RPA3-207ENST00000483031 ZFAND3Q9H8U3 227 aa9.14□□□□□ -0.95
RPA3-207ENST00000483031 UPP2O95045 317 aa9.13□□□□□ -0.95
RPA3-207ENST00000483031 C6orf118Q5T5N4 469 aa9.13□□□□□ -0.95
RPA3-207ENST00000483031 BPHLQ86WA6 291 aaPredicted RBP9.13□□□□□ -0.95
RPA3-207ENST00000483031 ZC3H15Q8WU90 426 aaKnown RBP9.13□□□□□ -0.95
RPA3-207ENST00000483031 NR3C2P08235 984 aa9.12□□□□□ -0.95
RPA3-207ENST00000483031 RIC3Q7Z5B4 369 aa9.12□□□□□ -0.95
RPA3-207ENST00000483031 PARP9Q8IXQ6 854 aa9.12□□□□□ -0.95
RPA3-207ENST00000483031 CABLES1Q8TDN4 633 aa9.11□□□□□ -0.95
RPA3-207ENST00000483031 BMP2P12643 396 aa9.1□□□□□ -0.95
RPA3-207ENST00000483031 CSPP1Q1MSJ5 1256 aa9.1□□□□□ -0.95
RPA3-207ENST00000483031 C4orf48Q5BLP8 95 aa9.1□□□□□ -0.95
RPA3-207ENST00000483031 ARMC2Q8NEN0 867 aa9.1□□□□□ -0.95
RPA3-207ENST00000483031 GRM5P41594 1212 aa9.09□□□□□ -0.95
RPA3-207ENST00000483031 LINC00528Q8N1L1 170 aa9.09□□□□□ -0.95
RPA3-207ENST00000483031 TSC1Q92574 1164 aa9.09□□□□□ -0.95
RPA3-207ENST00000483031 PER1O15534 1290 aaPredicted RBP9.08□□□□□ -0.96
RPA3-207ENST00000483031 MEIOBQ8N635 442 aa9.08□□□□□ -0.96
RPA3-207ENST00000483031 TRIM66O15016 1216 aa9.07□□□□□ -0.96
RPA3-207ENST00000483031 PPFIA3O75145 1194 aa9.07□□□□□ -0.96
RPA3-207ENST00000483031 NBPF14Q5TI25 921 aa9.07□□□□□ -0.96
RPA3-207ENST00000483031 NUTM2BA6NNL0 878 aaPredicted RBP9.06□□□□□ -0.96
RPA3-207ENST00000483031 NUTM2EB1AL46 878 aaPredicted RBP9.06□□□□□ -0.96
RPA3-207ENST00000483031 FSHRP23945 695 aa9.06□□□□□ -0.96
RPA3-207ENST00000483031 NUTM2DQ5VT03 806 aaPredicted RBP9.06□□□□□ -0.96
RPA3-207ENST00000483031 NUTM2AQ8IVF1 878 aaPredicted RBP9.06□□□□□ -0.96
RPA3-207ENST00000483031 C1QTNF2Q9BXJ5 285 aa9.06□□□□□ -0.96
RPA3-207ENST00000483031 MAP4K5Q9Y4K4 846 aa9.05□□□□□ -0.96
RPA3-207ENST00000483031 SOS2Q07890 1332 aaPredicted RBP9.05□□□□□ -0.96
RPA3-207ENST00000483031 VASH1Q7L8A9 365 aaPredicted RBP9.04□□□□□ -0.96
RPA3-207ENST00000483031 SH3RF1Q7Z6J0 888 aa9.04□□□□□ -0.96
RPA3-207ENST00000483031 AK7Q96M32 723 aa9.04□□□□□ -0.96
RPA3-207ENST00000483031 TUSC1Q2TAM9 212 aa9.03□□□□□ -0.96
RPA3-207ENST00000483031 TRMT44Q8IYL2 757 aaKnown RBP9.03□□□□□ -0.96
RPA3-207ENST00000483031 HELBQ8NG08 1087 aaPredicted RBP9.03□□□□□ -0.96
RPA3-207ENST00000483031 TSEN34Q9BSV6 310 aaKnown RBP9.03□□□□□ -0.96
RPA3-207ENST00000483031 LIMD1Q9UGP4 676 aa9.03□□□□□ -0.96
RPA3-207ENST00000483031 DNMT3LQ9UJW3 386 aa9.03□□□□□ -0.96
RPA3-207ENST00000483031 EMILIN1Q9Y6C2 1016 aa9.03□□□□□ -0.96
RPA3-207ENST00000483031 MAGEB6P1A0A0J9YX57 407 aa9.02□□□□□ -0.97
RPA3-207ENST00000483031 QPCTQ16769 361 aa9.02□□□□□ -0.97
RPA3-207ENST00000483031 MYSM1Q5VVJ2 828 aa9.02□□□□□ -0.97
RPA3-207ENST00000483031 CCDC116Q8IYX3 515 aa9.02□□□□□ -0.97
RPA3-207ENST00000483031 LILRB3O75022 631 aa9.01□□□□□ -0.97
RPA3-207ENST00000483031 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.01□□□□□ -0.974e-7■□□□□ 10.1
RPA3-207ENST00000483031 SH3BP5LQ7L8J4 393 aa9.01□□□□□ -0.97
RPA3-207ENST00000483031 TTLL8A6PVC2 850 aa8.99□□□□□ -0.97
RPA3-207ENST00000483031 KCNMA1Q12791 1236 aa8.99□□□□□ -0.97
RPA3-207ENST00000483031 GPKOWQ92917 476 aaPredicted RBP eCLIP8.99□□□□□ -0.97
RPA3-207ENST00000483031 CARD14Q9BXL6 1004 aa8.99□□□□□ -0.97
RPA3-207ENST00000483031 PGPEP1Q9NXJ5 209 aa8.98□□□□□ -0.97
RPA3-207ENST00000483031 PTSQ03393 145 aa8.96□□□□□ -0.98
RPA3-207ENST00000483031 PDE4DQ08499 809 aa8.96□□□□□ -0.98
RPA3-207ENST00000483031 ERFEQ4G0M1 354 aa8.96□□□□□ -0.98
RPA3-207ENST00000483031 RTL5Q5HYW3 569 aaPredicted RBP8.96□□□□□ -0.98
RPA3-207ENST00000483031 CNTNAP3BQ96NU0 1288 aa8.96□□□□□ -0.98
RPA3-207ENST00000483031 CNTNAP3Q9BZ76 1288 aa8.96□□□□□ -0.98
RPA3-207ENST00000483031 LOC100996750A0A140TA64 210 aa8.95□□□□□ -0.98
RPA3-207ENST00000483031 CLK2P49760 499 aaKnown RBP8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms