RNA–Protein interactions for RNA: ENST00000482904.1

RHBDF1-208, Transcript of rhomboid 5 homolog 1, human

TSL 3

Gene RHBDF1, Length 556 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RHBDF1-208	ENST00000482904	RALGAPB	Q86X10	1494 aa		33.51	■■■□□ 2.96
RHBDF1-208	ENST00000482904	SLIT2	O94813	1529 aa		33.51	■■■□□ 2.95
RHBDF1-208	ENST00000482904	EVC2	Q86UK5	1308 aa		33.51	■■■□□ 2.95
RHBDF1-208	ENST00000482904	CARD11	Q9BXL7	1154 aa		33.5	■■■□□ 2.95
RHBDF1-208	ENST00000482904	PLEKHG3	A1L390	1219 aa		33.49	■■■□□ 2.95
RHBDF1-208	ENST00000482904	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	33.48	■■■□□ 2.95
RHBDF1-208	ENST00000482904	UNC5CL	Q8IV45	518 aa		33.47	■■■□□ 2.95
RHBDF1-208	ENST00000482904	PLCH1	Q4KWH8	1693 aa		33.45	■■■□□ 2.95
RHBDF1-208	ENST00000482904	CRYBG1	Q9Y4K1	1723 aa		33.4	■■■□□ 2.94
RHBDF1-208	ENST00000482904	GJD4	Q96KN9	370 aa	Predicted RBP	33.4	■■■□□ 2.94
RHBDF1-208	ENST00000482904	NWD2	Q9ULI1	1742 aa		33.39	■■■□□ 2.94
RHBDF1-208	ENST00000482904	NUTM2G	Q5VZR2	741 aa		33.39	■■■□□ 2.94
RHBDF1-208	ENST00000482904	CABP1	Q9NZU7	370 aa		33.39	■■■□□ 2.94
RHBDF1-208	ENST00000482904	FAM83G	A6ND36	823 aa		33.37	■■■□□ 2.93
RHBDF1-208	ENST00000482904	PCGF6	Q9BYE7	350 aa		33.37	■■■□□ 2.93
RHBDF1-208	ENST00000482904	CCDC9	Q9Y3X0	531 aa	Known RBP	33.37	■■■□□ 2.93
RHBDF1-208	ENST00000482904	COL14A1	Q05707	1796 aa	Known RBP	33.36	■■■□□ 2.93
RHBDF1-208	ENST00000482904	PHRF1	Q9P1Y6	1649 aa	Known RBP	33.35	■■■□□ 2.93
RHBDF1-208	ENST00000482904	SBNO2	Q9Y2G9	1366 aa		33.35	■■■□□ 2.93
RHBDF1-208	ENST00000482904	ABTB2	Q8N961	1025 aa		33.35	■■■□□ 2.93
RHBDF1-208	ENST00000482904	UPF1	Q92900	1129 aa	Known RBP eCLIP	33.35	■■■□□ 2.93
RHBDF1-208	ENST00000482904	ATAD2	Q6PL18	1390 aa		33.34	■■■□□ 2.93
RHBDF1-208	ENST00000482904	PRDM11	Q9NQV5	511 aa		33.34	■■■□□ 2.93
RHBDF1-208	ENST00000482904	GLI3	P10071	1580 aa		33.34	■■■□□ 2.93
RHBDF1-208	ENST00000482904	VPS72	Q15906	364 aa		33.33	■■■□□ 2.93
RHBDF1-208	ENST00000482904	USP6	P35125	1406 aa		33.33	■■■□□ 2.93
RHBDF1-208	ENST00000482904	BRD4	O60885	1362 aa	Predicted RBP	33.33	■■■□□ 2.93
RHBDF1-208	ENST00000482904	BTG4	Q9NY30	223 aa		33.32	■■■□□ 2.92
RHBDF1-208	ENST00000482904	KIAA0232	Q92628	1395 aa		33.3	■■■□□ 2.92
RHBDF1-208	ENST00000482904	NRAP	Q86VF7	1730 aa		33.29	■■■□□ 2.92
RHBDF1-208	ENST00000482904	NRK	Q7Z2Y5	1582 aa		33.28	■■■□□ 2.92
RHBDF1-208	ENST00000482904	ZC3H6	P61129	1189 aa	Known RBP	33.26	■■■□□ 2.91
RHBDF1-208	ENST00000482904	NLRP13	Q86W25	1043 aa		33.26	■■■□□ 2.91
RHBDF1-208	ENST00000482904	USP19	O94966	1318 aa		33.25	■■■□□ 2.91
RHBDF1-208	ENST00000482904	CLSPN	Q9HAW4	1339 aa		33.25	■■■□□ 2.91
RHBDF1-208	ENST00000482904	CHRNA2	Q15822	529 aa		33.23	■■■□□ 2.91
RHBDF1-208	ENST00000482904		A0A0G2JS52	829 aa		33.21	■■■□□ 2.91
RHBDF1-208	ENST00000482904	MYT1	Q01538	1121 aa		33.21	■■■□□ 2.91
RHBDF1-208	ENST00000482904	ZNF692	Q9BU19	519 aa	Predicted RBP	33.2	■■■□□ 2.91
RHBDF1-208	ENST00000482904	NLRP6	P59044	892 aa		33.19	■■■□□ 2.9
RHBDF1-208	ENST00000482904	SSH2	Q76I76	1423 aa		33.19	■■■□□ 2.9
RHBDF1-208	ENST00000482904	SEPT12	Q8IYM1	358 aa		33.18	■■■□□ 2.9
RHBDF1-208	ENST00000482904	AKAP12	Q02952	1782 aa		33.18	■■■□□ 2.9
RHBDF1-208	ENST00000482904	KTN1	Q86UP2	1357 aa	Known RBP	33.18	■■■□□ 2.9
RHBDF1-208	ENST00000482904	PIK3C2A	O00443	1686 aa		33.17	■■■□□ 2.9
RHBDF1-208	ENST00000482904	ST20-MTHFS	A0A0A6YYL1	179 aa		33.16	■■■□□ 2.9
RHBDF1-208	ENST00000482904	GC	P02774	474 aa		33.16	■■■□□ 2.9
RHBDF1-208	ENST00000482904	TMC1	Q8TDI8	760 aa		33.16	■■■□□ 2.9
RHBDF1-208	ENST00000482904	STRN4	Q9NRL3	753 aa		33.16	■■■□□ 2.9
RHBDF1-208	ENST00000482904	CPD	O75976	1380 aa		33.16	■■■□□ 2.9
RHBDF1-208	ENST00000482904	CPSF1	Q10570	1443 aa	Known RBP	33.16	■■■□□ 2.9
RHBDF1-208	ENST00000482904	TTC21B	Q7Z4L5	1316 aa		33.15	■■■□□ 2.9
RHBDF1-208	ENST00000482904	TIMELESS	Q9UNS1	1208 aa		33.15	■■■□□ 2.9
RHBDF1-208	ENST00000482904	FAM98C	Q17RN3	349 aa	Known RBP	33.14	■■■□□ 2.9
RHBDF1-208	ENST00000482904	USP47	Q96K76	1375 aa		33.13	■■■□□ 2.89
RHBDF1-208	ENST00000482904	TTC21A	Q8NDW8	1320 aa		33.13	■■■□□ 2.89
RHBDF1-208	ENST00000482904	ZBTB7C	A1YPR0	619 aa		33.13	■■■□□ 2.89
RHBDF1-208	ENST00000482904	SLIT3	O75094	1523 aa		33.12	■■■□□ 2.89
RHBDF1-208	ENST00000482904	SPATA31A5	Q5VU36	1347 aa		33.12	■■■□□ 2.89
RHBDF1-208	ENST00000482904	SPATA31A7	Q8IWB4	1347 aa		33.12	■■■□□ 2.89
RHBDF1-208	ENST00000482904	CCER1	Q8TC90	406 aa	Predicted RBP	33.12	■■■□□ 2.89
RHBDF1-208	ENST00000482904	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	33.1	■■■□□ 2.89
RHBDF1-208	ENST00000482904	MON2	Q7Z3U7	1717 aa		33.1	■■■□□ 2.89
RHBDF1-208	ENST00000482904	SLC24A1	O60721	1099 aa		33.09	■■■□□ 2.89
RHBDF1-208	ENST00000482904	EVA1C	P58658	441 aa		33.09	■■■□□ 2.89
RHBDF1-208	ENST00000482904	TESK2	Q96S53	571 aa		33.09	■■■□□ 2.89
RHBDF1-208	ENST00000482904	ONECUT3	O60422	494 aa	Predicted RBP	33.08	■■■□□ 2.89
RHBDF1-208	ENST00000482904	LMO7	Q8WWI1	1683 aa		33.07	■■■□□ 2.88
RHBDF1-208	ENST00000482904	BRWD3	Q6RI45	1802 aa		33.07	■■■□□ 2.88
RHBDF1-208	ENST00000482904	CD163L1	Q9NR16	1453 aa		33.06	■■■□□ 2.88
RHBDF1-208	ENST00000482904	KRT27	Q7Z3Y8	459 aa		33.06	■■■□□ 2.88
RHBDF1-208	ENST00000482904	PUS7	Q96PZ0	661 aa	Known RBP	33.06	■■■□□ 2.88
RHBDF1-208	ENST00000482904	CAMTA1	Q9Y6Y1	1673 aa		33.05	■■■□□ 2.88
RHBDF1-208	ENST00000482904	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	33.05	■■■□□ 2.88
RHBDF1-208	ENST00000482904	TERF2IP	Q9NYB0	399 aa		33.05	■■■□□ 2.88
RHBDF1-208	ENST00000482904	SLC12A5	Q9H2X9	1139 aa		33.04	■■■□□ 2.88
RHBDF1-208	ENST00000482904	SPATA31A1	Q5TZJ5	1347 aa		33.03	■■■□□ 2.88
RHBDF1-208	ENST00000482904	SOX12	O15370	315 aa		33.03	■■■□□ 2.88
RHBDF1-208	ENST00000482904	NINL	Q9Y2I6	1382 aa		33.03	■■■□□ 2.88
RHBDF1-208	ENST00000482904		A0A1W2PP64	1363 aa		33.02	■■■□□ 2.88
RHBDF1-208	ENST00000482904	KCNH5	Q8NCM2	988 aa		33.02	■■■□□ 2.88
RHBDF1-208	ENST00000482904	USP35	Q9P2H5	1018 aa		33.02	■■■□□ 2.88
RHBDF1-208	ENST00000482904	COL5A2	P05997	1499 aa	Predicted RBP	33	■■■□□ 2.87
RHBDF1-208	ENST00000482904	TMF1	P82094	1093 aa		33	■■■□□ 2.87
RHBDF1-208	ENST00000482904	EDC4	Q6P2E9	1401 aa	Known RBP	33	■■■□□ 2.87
RHBDF1-208	ENST00000482904	THSD7A	Q9UPZ6	1657 aa		33	■■■□□ 2.87
RHBDF1-208	ENST00000482904	AATK	Q6ZMQ8	1374 aa		32.99	■■■□□ 2.87
RHBDF1-208	ENST00000482904	LARP1	Q6PKG0	1096 aa	Known RBP	32.99	■■■□□ 2.87
RHBDF1-208	ENST00000482904	CCDC125	Q86Z20	511 aa		32.99	■■■□□ 2.87
RHBDF1-208	ENST00000482904	BLM	P54132	1417 aa	Predicted RBP	32.97	■■■□□ 2.87
RHBDF1-208	ENST00000482904	NME9	Q86XW9	330 aa		32.96	■■■□□ 2.87
RHBDF1-208	ENST00000482904	USP31	Q70CQ4	1352 aa		32.94	■■■□□ 2.86
RHBDF1-208	ENST00000482904	NFAT5	O94916	1531 aa		32.93	■■■□□ 2.86
RHBDF1-208	ENST00000482904	SF3B2	Q13435	895 aa	Known RBP	32.93	■■■□□ 2.86
RHBDF1-208	ENST00000482904	EP400	Q96L91	3159 aa		32.92	■■■□□ 2.86
RHBDF1-208	ENST00000482904	TCP11L2	Q8N4U5	519 aa		32.92	■■■□□ 2.86
RHBDF1-208	ENST00000482904	ZRANB1	Q9UGI0	708 aa		32.92	■■■□□ 2.86
RHBDF1-208	ENST00000482904	CRB1	P82279	1406 aa		32.92	■■■□□ 2.86
RHBDF1-208	ENST00000482904	BARGIN	Q6ZT62	677 aa		32.9	■■■□□ 2.86
RHBDF1-208	ENST00000482904	ARHGEF25	Q86VW2	580 aa		32.9	■■■□□ 2.86

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