RNA–Protein interactions for RNA: ENST00000482855.5

RPGR-208, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

TSL 2

Gene RPGR, Length 2,819 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-208ENST00000482855 OFD1O75665 1012 aa13.84□□□□□ -0.19
RPGR-208ENST00000482855 HSP90AB1P08238 724 aaKnown RBP13.84□□□□□ -0.19
RPGR-208ENST00000482855 MVPQ14764 893 aaKnown RBP13.84□□□□□ -0.19
RPGR-208ENST00000482855 SMC5Q8IY18 1101 aa13.84□□□□□ -0.19
RPGR-208ENST00000482855 SNX21Q969T3 373 aa13.84□□□□□ -0.19
RPGR-208ENST00000482855 PPP1R9BQ96SB3 815 aa13.84□□□□□ -0.19
RPGR-208ENST00000482855 NASPP49321 788 aaPredicted RBP13.83□□□□□ -0.19
RPGR-208ENST00000482855 RAB3GAP1Q15042 981 aa13.83□□□□□ -0.2
RPGR-208ENST00000482855 ABCC3O15438 1527 aa13.82□□□□□ -0.2
RPGR-208ENST00000482855 TERF1P54274 439 aa13.82□□□□□ -0.2
RPGR-208ENST00000482855 RRP7AQ9Y3A4 280 aaKnown RBP13.82□□□□□ -0.2
RPGR-208ENST00000482855 POLR3AO14802 1390 aaPredicted RBP13.82□□□□□ -0.2
RPGR-208ENST00000482855 FTSJ3Q8IY81 847 aaKnown RBP13.82□□□□□ -0.2
RPGR-208ENST00000482855 CEP152O94986 1710 aa13.81□□□□□ -0.2
RPGR-208ENST00000482855 RBM25P49756 843 aaKnown RBP13.81□□□□□ -0.2
RPGR-208ENST00000482855 MAP7D2Q96T17 732 aa13.81□□□□□ -0.2
RPGR-208ENST00000482855 WDR63Q8IWG1 891 aa13.81□□□□□ -0.2
RPGR-208ENST00000482855 RUNDC1Q96C34 613 aa13.81□□□□□ -0.2
RPGR-208ENST00000482855 RBM10P98175 930 aaKnown RBP13.8□□□□□ -0.2
RPGR-208ENST00000482855 ZKSCAN2Q63HK3 967 aa13.8□□□□□ -0.2
RPGR-208ENST00000482855 TET3O43151 1660 aa13.8□□□□□ -0.2
RPGR-208ENST00000482855 GOLGA6L22H0YM25 854 aa13.79□□□□□ -0.2
RPGR-208ENST00000482855 DZIP1LQ8IYY4 767 aaKnown RBP13.79□□□□□ -0.2
RPGR-208ENST00000482855 PODXL2Q9NZ53 605 aa13.79□□□□□ -0.2
RPGR-208ENST00000482855 RIPK4P57078 832 aa13.79□□□□□ -0.2
RPGR-208ENST00000482855 HDAC1Q13547 482 aaPredicted RBP13.79□□□□□ -0.2
RPGR-208ENST00000482855 TCP11L2Q8N4U5 519 aa13.79□□□□□ -0.2
RPGR-208ENST00000482855 SPHKAPQ2M3C7 1700 aa13.78□□□□□ -0.2
RPGR-208ENST00000482855 SHPRHQ149N8 1683 aa13.78□□□□□ -0.2
RPGR-208ENST00000482855 IQSEC2Q5JU85 1478 aa13.78□□□□□ -0.2
RPGR-208ENST00000482855 PHF23Q9BUL5 403 aaPredicted RBP13.77□□□□□ -0.2
RPGR-208ENST00000482855 PRDM4Q9UKN5 801 aa13.77□□□□□ -0.2
RPGR-208ENST00000482855 IBTKQ9P2D0 1353 aaPredicted RBP13.77□□□□□ -0.2
RPGR-208ENST00000482855 FAM13BQ9NYF5 915 aa13.77□□□□□ -0.21
RPGR-208ENST00000482855 CEP170BQ9Y4F5 1589 aaPredicted RBP13.76□□□□□ -0.21
RPGR-208ENST00000482855 STRCQ7RTU9 1775 aa13.76□□□□□ -0.21
RPGR-208ENST00000482855 CARD14Q9BXL6 1004 aa13.76□□□□□ -0.21
RPGR-208ENST00000482855 R3HCC1Q9Y3T6 440 aaKnown RBP13.76□□□□□ -0.21
RPGR-208ENST00000482855 KANK1Q14678 1352 aa13.76□□□□□ -0.21
RPGR-208ENST00000482855 DDX49Q9Y6V7 483 aaKnown RBP13.76□□□□□ -0.21
RPGR-208ENST00000482855 SLC24A1O60721 1099 aa13.75□□□□□ -0.21
RPGR-208ENST00000482855 KLHL40Q2TBA0 621 aa13.75□□□□□ -0.21
RPGR-208ENST00000482855 FOXD4L1Q9NU39 408 aa13.75□□□□□ -0.21
RPGR-208ENST00000482855 EFCAB6Q5THR3 1501 aa13.75□□□□□ -0.21
RPGR-208ENST00000482855 A2ML1A8K2U0 1454 aa13.75□□□□□ -0.21
RPGR-208ENST00000482855 HS1BP3Q53T59 392 aa13.75□□□□□ -0.21
RPGR-208ENST00000482855 DDX19BQ9UMR2 479 aa13.75□□□□□ -0.21
RPGR-208ENST00000482855 PTPRTO14522 1441 aa13.75□□□□□ -0.21
RPGR-208ENST00000482855 CCDC27Q2M243 656 aa13.74□□□□□ -0.21
RPGR-208ENST00000482855 STAC3Q96MF2 364 aa13.74□□□□□ -0.21
RPGR-208ENST00000482855 K7ELQ4 463 aaPredicted RBP13.73□□□□□ -0.21
RPGR-208ENST00000482855 SSFA2P28290 1259 aa13.73□□□□□ -0.21
RPGR-208ENST00000482855 ITPRIPQ8IWB1 547 aa13.73□□□□□ -0.21
RPGR-208ENST00000482855 ERVK-7P63135 1459 aa13.73□□□□□ -0.21
RPGR-208ENST00000482855 MORC1Q86VD1 984 aa13.72□□□□□ -0.21
RPGR-208ENST00000482855 MTERF4Q7Z6M4 381 aaKnown RBP13.72□□□□□ -0.21
RPGR-208ENST00000482855 SMC4Q9NTJ3 1288 aa13.72□□□□□ -0.21
RPGR-208ENST00000482855 NOL7Q9UMY1 257 aaKnown RBP13.72□□□□□ -0.21
RPGR-208ENST00000482855 PIK3C2BO00750 1634 aa13.72□□□□□ -0.21
RPGR-208ENST00000482855 UQCRHLA0A096LP55 91 aa13.72□□□□□ -0.21
RPGR-208ENST00000482855 ZNF500O60304 480 aaPredicted RBP13.72□□□□□ -0.21
RPGR-208ENST00000482855 UQCRHP07919 91 aa13.72□□□□□ -0.21
RPGR-208ENST00000482855 CLEC17AQ6ZS10 378 aa13.72□□□□□ -0.21
RPGR-208ENST00000482855 CT47B1P0C2W7 299 aaPredicted RBP13.71□□□□□ -0.21
RPGR-208ENST00000482855 ZNF445P59923 1031 aa13.71□□□□□ -0.21
RPGR-208ENST00000482855 KIAA1210Q9ULL0 1709 aa13.71□□□□□ -0.22
RPGR-208ENST00000482855 BAG4O95429 457 aaKnown RBP13.71□□□□□ -0.22
RPGR-208ENST00000482855 TRIM27P14373 513 aa13.71□□□□□ -0.22
RPGR-208ENST00000482855 TNNT2P45379 298 aaPredicted RBP13.71□□□□□ -0.22
RPGR-208ENST00000482855 KIF2CQ99661 725 aa13.71□□□□□ -0.22
RPGR-208ENST00000482855 AK9Q5TCS8 1911 aa13.71□□□□□ -0.22
RPGR-208ENST00000482855 CD2BP2O95400 341 aaKnown RBP13.7□□□□□ -0.22
RPGR-208ENST00000482855 NUCB1Q02818 461 aa13.7□□□□□ -0.22
RPGR-208ENST00000482855 UBR1Q8IWV7 1749 aa13.7□□□□□ -0.22
RPGR-208ENST00000482855 SMAP1Q8IYB5 467 aaPredicted RBP13.69□□□□□ -0.22
RPGR-208ENST00000482855 LNPKQ9C0E8 428 aa13.69□□□□□ -0.22
RPGR-208ENST00000482855 XPCQ01831 940 aaPredicted RBP13.69□□□□□ -0.22
RPGR-208ENST00000482855 CSPP1Q1MSJ5 1256 aa13.69□□□□□ -0.22
RPGR-208ENST00000482855 BMP2KLQ5H9B9 411 aa13.69□□□□□ -0.22
RPGR-208ENST00000482855 ATF7IPQ6VMQ6 1270 aa13.69□□□□□ -0.22
RPGR-208ENST00000482855 TRPM2O94759 1503 aa13.69□□□□□ -0.22
RPGR-208ENST00000482855 DYNC1I1O14576 645 aa13.68□□□□□ -0.22
RPGR-208ENST00000482855 NCLP19338 710 aaKnown RBP13.68□□□□□ -0.22
RPGR-208ENST00000482855 GAS2L2Q8NHY3 880 aa13.68□□□□□ -0.22
RPGR-208ENST00000482855 CFAP53Q96M91 514 aa13.68□□□□□ -0.22
RPGR-208ENST00000482855 NEURL4Q96JN8 1562 aa13.68□□□□□ -0.22
RPGR-208ENST00000482855 MED14O60244 1454 aa13.68□□□□□ -0.22
RPGR-208ENST00000482855 NSD3Q9BZ95 1437 aa13.68□□□□□ -0.22
RPGR-208ENST00000482855 NCBP3Q53F19 620 aaKnown RBP13.68□□□□□ -0.22
RPGR-208ENST00000482855 CAVIN1Q6NZI2 390 aaKnown RBP13.68□□□□□ -0.22
RPGR-208ENST00000482855 CHD1LQ86WJ1 897 aa13.68□□□□□ -0.22
RPGR-208ENST00000482855 PDLIM2Q96JY6 352 aa13.68□□□□□ -0.22
RPGR-208ENST00000482855 SLIT1O75093 1534 aa13.67□□□□□ -0.22
RPGR-208ENST00000482855 ZSCAN23Q3MJ62 389 aa13.67□□□□□ -0.22
RPGR-208ENST00000482855 MCTP1Q6DN14 999 aa13.67□□□□□ -0.22
RPGR-208ENST00000482855 TSR2Q969E8 191 aaKnown RBP13.67□□□□□ -0.22
RPGR-208ENST00000482855 ZKSCAN5Q9Y2L8 839 aa13.67□□□□□ -0.22
RPGR-208ENST00000482855 TMEM57Q8N5G2 664 aa13.66□□□□□ -0.22
RPGR-208ENST00000482855 SSH1Q8WYL5 1049 aa13.66□□□□□ -0.22
RPGR-208ENST00000482855 RBM42Q9BTD8 480 aaKnown RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 93.7 ms