RNA–Protein interactions for RNA: ENST00000482769.1

IGKV2-28-201, Transcript of immunoglobulin kappa variable 2-28, humanhuman

APPRIS P1 BASIC

Gene IGKV2-28, Length 390 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV2-28-201ENST00000482769 PHF8Q9UPP1 1060 aa16.9■□□□□ 0.3
IGKV2-28-201ENST00000482769 RRBP1Q9P2E9 1410 aaKnown RBP16.89■□□□□ 0.29
IGKV2-28-201ENST00000482769 FAM196AQ6ZSG2 479 aa16.89■□□□□ 0.29
IGKV2-28-201ENST00000482769 NBPF8Q3BBV2 869 aa16.88■□□□□ 0.29
IGKV2-28-201ENST00000482769 NBPF14Q5TI25 921 aa16.88■□□□□ 0.29
IGKV2-28-201ENST00000482769 RPGRIP1LQ68CZ1 1315 aa16.87■□□□□ 0.29
IGKV2-28-201ENST00000482769 UTRNP46939 3433 aa16.86■□□□□ 0.29
IGKV2-28-201ENST00000482769 ABCC11Q96J66 1382 aa16.85■□□□□ 0.29
IGKV2-28-201ENST00000482769 RGPD3A6NKT7 1758 aaPredicted RBP16.84■□□□□ 0.29
IGKV2-28-201ENST00000482769 RGPD4Q7Z3J3 1758 aa16.84■□□□□ 0.29
IGKV2-28-201ENST00000482769 SPATA31A1Q5TZJ5 1347 aa16.83■□□□□ 0.28
IGKV2-28-201ENST00000482769 ADGRF5Q8IZF2 1346 aa16.82■□□□□ 0.28
IGKV2-28-201ENST00000482769 ITGAEP38570 1179 aa16.81■□□□□ 0.28
IGKV2-28-201ENST00000482769 TMEM132EQ6IEE7 984 aa16.81■□□□□ 0.28
IGKV2-28-201ENST00000482769 YTHDC2Q9H6S0 1430 aaKnown RBP16.8■□□□□ 0.28
IGKV2-28-201ENST00000482769 PHRF1Q9P1Y6 1649 aaKnown RBP16.8■□□□□ 0.28
IGKV2-28-201ENST00000482769 SBF2Q86WG5 1849 aa16.8■□□□□ 0.28
IGKV2-28-201ENST00000482769 PMFBP1Q8TBY8 1022 aa16.79■□□□□ 0.28
IGKV2-28-201ENST00000482769 ANO8Q9HCE9 1232 aaPredicted RBP16.78■□□□□ 0.28
IGKV2-28-201ENST00000482769 PRDM11Q9NQV5 511 aa16.78■□□□□ 0.28
IGKV2-28-201ENST00000482769 PDGFDQ9GZP0 370 aaPredicted RBP16.77■□□□□ 0.28
IGKV2-28-201ENST00000482769 STRN4Q9NRL3 753 aa16.76■□□□□ 0.27
IGKV2-28-201ENST00000482769 PIK3C2GO75747 1445 aa16.76■□□□□ 0.27
IGKV2-28-201ENST00000482769 PEAK1Q9H792 1746 aa16.76■□□□□ 0.27
IGKV2-28-201ENST00000482769 PARP4Q9UKK3 1724 aaKnown RBP16.76■□□□□ 0.27
IGKV2-28-201ENST00000482769 PTGER2P43116 358 aa16.75■□□□□ 0.27
IGKV2-28-201ENST00000482769 PDE3BQ13370 1112 aa16.75■□□□□ 0.27
IGKV2-28-201ENST00000482769 USP35Q9P2H5 1018 aa16.75■□□□□ 0.27
IGKV2-28-201ENST00000482769 ANKARQ7Z5J8 1434 aa16.75■□□□□ 0.27
IGKV2-28-201ENST00000482769 ZBTB7AO95365 584 aa16.74■□□□□ 0.27
IGKV2-28-201ENST00000482769 CHRNA2Q15822 529 aa16.74■□□□□ 0.27
IGKV2-28-201ENST00000482769 KIAA0232Q92628 1395 aa16.74■□□□□ 0.27
IGKV2-28-201ENST00000482769 DLC1Q96QB1 1528 aa16.73■□□□□ 0.27
IGKV2-28-201ENST00000482769 SYT17Q9BSW7 474 aa16.72■□□□□ 0.27
IGKV2-28-201ENST00000482769 FHDC1Q9C0D6 1143 aaPredicted RBP16.72■□□□□ 0.27
IGKV2-28-201ENST00000482769 SSH2Q76I76 1423 aa16.71■□□□□ 0.27
IGKV2-28-201ENST00000482769 CEP350Q5VT06 3117 aa16.71■□□□□ 0.27
IGKV2-28-201ENST00000482769 GIGYF1O75420 1035 aaPredicted RBP16.71■□□□□ 0.27
IGKV2-28-201ENST00000482769 SAFB2Q14151 953 aaKnown RBP eCLIP16.71■□□□□ 0.27
IGKV2-28-201ENST00000482769 BARGINQ6ZT62 677 aa16.71■□□□□ 0.27
IGKV2-28-201ENST00000482769 GPRASP1Q5JY77 1395 aa16.71■□□□□ 0.27
IGKV2-28-201ENST00000482769 ACIN1Q9UKV3 1341 aaKnown RBP16.7■□□□□ 0.26
IGKV2-28-201ENST00000482769 SHANK3Q9BYB0 1731 aa16.7■□□□□ 0.26
IGKV2-28-201ENST00000482769 LMO7Q8WWI1 1683 aa16.69■□□□□ 0.26
IGKV2-28-201ENST00000482769 ANKRD30BQ9BXX2 1392 aa16.69■□□□□ 0.26
IGKV2-28-201ENST00000482769 SIRT1Q96EB6 747 aa16.69■□□□□ 0.26
IGKV2-28-201ENST00000482769 ATF5Q9Y2D1 282 aaPredicted RBP16.69■□□□□ 0.26
IGKV2-28-201ENST00000482769 SPATA31E1Q6ZUB1 1445 aa16.69■□□□□ 0.26
IGKV2-28-201ENST00000482769 LRRC37A3O60309 1634 aa16.68■□□□□ 0.26
IGKV2-28-201ENST00000482769 RGL3Q3MIN7 710 aa16.67■□□□□ 0.26
IGKV2-28-201ENST00000482769 OVOS2A0A0G2JMS6 1433 aa16.66■□□□□ 0.26
IGKV2-28-201ENST00000482769 OVOS2A0A0J9YW53 1432 aa16.66■□□□□ 0.26
IGKV2-28-201ENST00000482769 OVOS2Q6IE36 1432 aa16.66■□□□□ 0.26
IGKV2-28-201ENST00000482769 PRAM1Q96QH2 718 aa16.66■□□□□ 0.26
IGKV2-28-201ENST00000482769 PRR36Q9H6K5 1346 aa16.66■□□□□ 0.26
IGKV2-28-201ENST00000482769 TULP4Q9NRJ4 1543 aa16.65■□□□□ 0.26
IGKV2-28-201ENST00000482769 PLSCR1O15162 318 aa16.65■□□□□ 0.26
IGKV2-28-201ENST00000482769 PAK3O75914 559 aaPredicted RBP16.65■□□□□ 0.26
IGKV2-28-201ENST00000482769 ZC3H6P61129 1189 aaKnown RBP16.65■□□□□ 0.26
IGKV2-28-201ENST00000482769 LARP1Q6PKG0 1096 aaKnown RBP16.65■□□□□ 0.26
IGKV2-28-201ENST00000482769 ITSN1Q15811 1721 aa16.65■□□□□ 0.26
IGKV2-28-201ENST00000482769 TCP11L2Q8N4U5 519 aa16.64■□□□□ 0.25
IGKV2-28-201ENST00000482769 BCL11BQ9C0K0 894 aaPredicted RBP16.64■□□□□ 0.25
IGKV2-28-201ENST00000482769 AKAP12Q02952 1782 aa16.64■□□□□ 0.25
IGKV2-28-201ENST00000482769 WNK3Q9BYP7 1800 aa16.63■□□□□ 0.25
IGKV2-28-201ENST00000482769 PTF1AQ7RTS3 328 aa16.63■□□□□ 0.25
IGKV2-28-201ENST00000482769 SGIP1Q9BQI5 828 aa16.63■□□□□ 0.25
IGKV2-28-201ENST00000482769 DHX57Q6P158 1386 aaKnown RBP16.63■□□□□ 0.25
IGKV2-28-201ENST00000482769 EVA1CP58658 441 aa16.62■□□□□ 0.25
IGKV2-28-201ENST00000482769 SLC4A1APQ9BWU0 796 aaKnown RBP16.62■□□□□ 0.25
IGKV2-28-201ENST00000482769 ATP7BP35670 1465 aa16.61■□□□□ 0.25
IGKV2-28-201ENST00000482769 PROM2Q8N271 834 aa16.61■□□□□ 0.25
IGKV2-28-201ENST00000482769 HIRIP3Q9BW71 556 aaPredicted RBP16.61■□□□□ 0.25
IGKV2-28-201ENST00000482769 NGDNQ8NEJ9 315 aaKnown RBP16.59■□□□□ 0.25
IGKV2-28-201ENST00000482769 MTFR1LQ9H019 292 aa16.59■□□□□ 0.25
IGKV2-28-201ENST00000482769 C14orf93Q9H972 538 aaKnown RBP16.59■□□□□ 0.25
IGKV2-28-201ENST00000482769 MAP3K5Q99683 1374 aa16.59■□□□□ 0.25
IGKV2-28-201ENST00000482769 C11orf95C9JLR9 678 aaPredicted RBP16.58■□□□□ 0.24
IGKV2-28-201ENST00000482769 CFAP70Q5T0N1 1121 aa16.58■□□□□ 0.24
IGKV2-28-201ENST00000482769 NUTM2GQ5VZR2 741 aa16.58■□□□□ 0.24
IGKV2-28-201ENST00000482769 POGKQ9P215 609 aa16.58■□□□□ 0.24
IGKV2-28-201ENST00000482769 EIF3AQ14152 1382 aaKnown RBP16.58■□□□□ 0.24
IGKV2-28-201ENST00000482769 COL5A2P05997 1499 aaPredicted RBP16.58■□□□□ 0.24
IGKV2-28-201ENST00000482769 STK32BQ9NY57 414 aa16.57■□□□□ 0.24
IGKV2-28-201ENST00000482769 THRAP3Q9Y2W1 955 aaKnown RBP16.57■□□□□ 0.24
IGKV2-28-201ENST00000482769 MINK1Q8N4C8 1332 aaPredicted RBP16.56■□□□□ 0.24
IGKV2-28-201ENST00000482769 SLC15A2Q16348 729 aa16.56■□□□□ 0.24
IGKV2-28-201ENST00000482769 GPR162Q16538 588 aa16.56■□□□□ 0.24
IGKV2-28-201ENST00000482769 ARXQ96QS3 562 aa16.56■□□□□ 0.24
IGKV2-28-201ENST00000482769 TOPAZ1Q8N9V7 1692 aa16.55■□□□□ 0.24
IGKV2-28-201ENST00000482769 PAPPAQ13219 1627 aa16.55■□□□□ 0.24
IGKV2-28-201ENST00000482769 ADGRB1O14514 1584 aa16.55■□□□□ 0.24
IGKV2-28-201ENST00000482769 CPDO75976 1380 aa16.54■□□□□ 0.24
IGKV2-28-201ENST00000482769 TXNRD1Q16881 649 aa16.54■□□□□ 0.24
IGKV2-28-201ENST00000482769 CRB1P82279 1406 aa16.53■□□□□ 0.24
IGKV2-28-201ENST00000482769 WASLO00401 505 aaPredicted RBP16.52■□□□□ 0.24
IGKV2-28-201ENST00000482769 COL24A1Q17RW2 1714 aa16.51■□□□□ 0.23
IGKV2-28-201ENST00000482769 DDB1Q16531 1140 aa16.5■□□□□ 0.23
IGKV2-28-201ENST00000482769 PELP1Q8IZL8 1130 aaKnown RBP16.5■□□□□ 0.23
IGKV2-28-201ENST00000482769 BCL9O00512 1426 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms