RNA–Protein interactions for RNA: ENST00000482424.1

CLIP2-205, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 5

Gene CLIP2, Length 971 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-205ENST00000482424 PAK3O75914 559 aaPredicted RBP28.46■■■□□ 2.15
CLIP2-205ENST00000482424 CDK12Q9NYV4 1490 aaPredicted RBP28.46■■■□□ 2.15
CLIP2-205ENST00000482424 RBM6P78332 1123 aaKnown RBP28.45■■■□□ 2.14
CLIP2-205ENST00000482424 SLIT2O94813 1529 aa28.44■■■□□ 2.14
CLIP2-205ENST00000482424 HAP1P54257 671 aaPredicted RBP28.44■■■□□ 2.14
CLIP2-205ENST00000482424 CABP1Q9NZU7 370 aa28.44■■■□□ 2.14
CLIP2-205ENST00000482424 TRPC5Q9UL62 973 aaPredicted RBP28.44■■■□□ 2.14
CLIP2-205ENST00000482424 CRYBG1Q9Y4K1 1723 aa28.43■■■□□ 2.14
CLIP2-205ENST00000482424 ATRNO75882 1429 aa28.43■■■□□ 2.14
CLIP2-205ENST00000482424 BRD4O60885 1362 aaPredicted RBP28.42■■■□□ 2.14
CLIP2-205ENST00000482424 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.4■■■□□ 2.14
CLIP2-205ENST00000482424 PLEKHG5O94827 1062 aa28.39■■■□□ 2.14
CLIP2-205ENST00000482424 ATAD2Q6PL18 1390 aa28.38■■■□□ 2.13
CLIP2-205ENST00000482424 UNC5CLQ8IV45 518 aa28.38■■■□□ 2.13
CLIP2-205ENST00000482424 USP6P35125 1406 aa28.36■■■□□ 2.13
CLIP2-205ENST00000482424 FAM83GA6ND36 823 aa28.36■■■□□ 2.13
CLIP2-205ENST00000482424 SSH2Q76I76 1423 aa28.35■■■□□ 2.13
CLIP2-205ENST00000482424 NWD2Q9ULI1 1742 aa28.35■■■□□ 2.13
CLIP2-205ENST00000482424 CCER1Q8TC90 406 aaPredicted RBP28.35■■■□□ 2.13
CLIP2-205ENST00000482424 TESK2Q96S53 571 aa28.35■■■□□ 2.13
CLIP2-205ENST00000482424 ST20-MTHFSA0A0A6YYL1 179 aa28.34■■■□□ 2.13
CLIP2-205ENST00000482424 ABTB2Q8N961 1025 aa28.34■■■□□ 2.13
CLIP2-205ENST00000482424 PUS7Q96PZ0 661 aaKnown RBP28.34■■■□□ 2.13
CLIP2-205ENST00000482424 ZNF692Q9BU19 519 aaPredicted RBP28.34■■■□□ 2.13
CLIP2-205ENST00000482424 PLCH1Q4KWH8 1693 aa28.34■■■□□ 2.13
CLIP2-205ENST00000482424 RGS12O14924 1447 aa28.33■■■□□ 2.13
CLIP2-205ENST00000482424 PHRF1Q9P1Y6 1649 aaKnown RBP28.32■■■□□ 2.12
CLIP2-205ENST00000482424 GJD4Q96KN9 370 aaPredicted RBP28.32■■■□□ 2.12
CLIP2-205ENST00000482424 CPSF1Q10570 1443 aaKnown RBP28.32■■■□□ 2.12
CLIP2-205ENST00000482424 SLC24A1O60721 1099 aa28.31■■■□□ 2.12
CLIP2-205ENST00000482424 AKAP12Q02952 1782 aa28.31■■■□□ 2.12
CLIP2-205ENST00000482424 COL14A1Q05707 1796 aaKnown RBP28.3■■■□□ 2.12
CLIP2-205ENST00000482424 USP19O94966 1318 aa28.3■■■□□ 2.12
CLIP2-205ENST00000482424 NUTM2GQ5VZR2 741 aa28.3■■■□□ 2.12
CLIP2-205ENST00000482424 NLRP13Q86W25 1043 aa28.28■■■□□ 2.12
CLIP2-205ENST00000482424 USP47Q96K76 1375 aa28.27■■■□□ 2.12
CLIP2-205ENST00000482424 VPS72Q15906 364 aa28.27■■■□□ 2.12
CLIP2-205ENST00000482424 GLI3P10071 1580 aa28.25■■■□□ 2.11
CLIP2-205ENST00000482424 NRAPQ86VF7 1730 aa28.25■■■□□ 2.11
CLIP2-205ENST00000482424 KIAA0232Q92628 1395 aa28.24■■■□□ 2.11
CLIP2-205ENST00000482424 NRKQ7Z2Y5 1582 aa28.24■■■□□ 2.11
CLIP2-205ENST00000482424 PRDM11Q9NQV5 511 aa28.24■■■□□ 2.11
CLIP2-205ENST00000482424 BTG4Q9NY30 223 aa28.24■■■□□ 2.11
CLIP2-205ENST00000482424 TTC21BQ7Z4L5 1316 aa28.23■■■□□ 2.11
CLIP2-205ENST00000482424 CD163L1Q9NR16 1453 aa28.23■■■□□ 2.11
CLIP2-205ENST00000482424 PIK3C2AO00443 1686 aa28.23■■■□□ 2.11
CLIP2-205ENST00000482424 GCP02774 474 aa28.22■■■□□ 2.11
CLIP2-205ENST00000482424 ZC3H6P61129 1189 aaKnown RBP28.22■■■□□ 2.11
CLIP2-205ENST00000482424 MON2Q7Z3U7 1717 aa28.22■■■□□ 2.11
CLIP2-205ENST00000482424 KTN1Q86UP2 1357 aaKnown RBP28.22■■■□□ 2.11
CLIP2-205ENST00000482424 TTC21AQ8NDW8 1320 aa28.21■■■□□ 2.11
CLIP2-205ENST00000482424 NLRP6P59044 892 aa28.21■■■□□ 2.11
CLIP2-205ENST00000482424 SLC12A5Q9H2X9 1139 aa28.21■■■□□ 2.11
CLIP2-205ENST00000482424 CPDO75976 1380 aa28.21■■■□□ 2.11
CLIP2-205ENST00000482424 SLIT3O75094 1523 aa28.19■■■□□ 2.1
CLIP2-205ENST00000482424 ONECUT3O60422 494 aaPredicted RBP28.18■■■□□ 2.1
CLIP2-205ENST00000482424 TMC1Q8TDI8 760 aa28.18■■■□□ 2.1
CLIP2-205ENST00000482424 NINLQ9Y2I6 1382 aa28.17■■■□□ 2.1
CLIP2-205ENST00000482424 CHRNA2Q15822 529 aa28.17■■■□□ 2.1
CLIP2-205ENST00000482424 UPF1Q92900 1129 aaKnown RBP eCLIP28.17■■■□□ 2.1
CLIP2-205ENST00000482424 TMF1P82094 1093 aa28.15■■■□□ 2.1
CLIP2-205ENST00000482424 HDGFL2Q7Z4V5 671 aaPredicted RBP28.15■■■□□ 2.1
CLIP2-205ENST00000482424 TERF2IPQ9NYB0 399 aa28.14■■■□□ 2.1
CLIP2-205ENST00000482424 CCDC9Q9Y3X0 531 aaKnown RBP28.14■■■□□ 2.1
CLIP2-205ENST00000482424 LMO7Q8WWI1 1683 aa28.13■■■□□ 2.09
CLIP2-205ENST00000482424 SPATA31A5Q5VU36 1347 aa28.12■■■□□ 2.09
CLIP2-205ENST00000482424 SPATA31A7Q8IWB4 1347 aa28.12■■■□□ 2.09
CLIP2-205ENST00000482424 A0A1W2PP64 1363 aa28.11■■■□□ 2.09
CLIP2-205ENST00000482424 EDC4Q6P2E9 1401 aaKnown RBP28.11■■■□□ 2.09
CLIP2-205ENST00000482424 CAMTA1Q9Y6Y1 1673 aa28.11■■■□□ 2.09
CLIP2-205ENST00000482424 USP31Q70CQ4 1352 aa28.11■■■□□ 2.09
CLIP2-205ENST00000482424 KCNH5Q8NCM2 988 aa28.09■■■□□ 2.09
CLIP2-205ENST00000482424 USP54Q70EL1 1684 aa28.09■■■□□ 2.09
CLIP2-205ENST00000482424 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.08■■■□□ 2.09
CLIP2-205ENST00000482424 SEPT12Q8IYM1 358 aa28.08■■■□□ 2.09
CLIP2-205ENST00000482424 CDCA8Q53HL2 280 aa28.07■■■□□ 2.08
CLIP2-205ENST00000482424 AATKQ6ZMQ8 1374 aa28.07■■■□□ 2.08
CLIP2-205ENST00000482424 BRWD3Q6RI45 1802 aa28.06■■■□□ 2.08
CLIP2-205ENST00000482424 SPATA31A1Q5TZJ5 1347 aa28.05■■■□□ 2.08
CLIP2-205ENST00000482424 STRN4Q9NRL3 753 aa28.05■■■□□ 2.08
CLIP2-205ENST00000482424 COL18A1P39060 1754 aa28.04■■■□□ 2.08
CLIP2-205ENST00000482424 ANKRD36BQ8N2N9 1353 aa28.04■■■□□ 2.08
CLIP2-205ENST00000482424 ARHGEF25Q86VW2 580 aa28.04■■■□□ 2.08
CLIP2-205ENST00000482424 NME9Q86XW9 330 aa28.04■■■□□ 2.08
CLIP2-205ENST00000482424 ZRANB1Q9UGI0 708 aa28.04■■■□□ 2.08
CLIP2-205ENST00000482424 NFAT5O94916 1531 aa28.03■■■□□ 2.08
CLIP2-205ENST00000482424 EVA1CP58658 441 aa28.03■■■□□ 2.08
CLIP2-205ENST00000482424 FAM98CQ17RN3 349 aaKnown RBP28.03■■■□□ 2.08
CLIP2-205ENST00000482424 COL5A2P05997 1499 aaPredicted RBP28.02■■■□□ 2.08
CLIP2-205ENST00000482424 EIF4G2P78344 907 aaKnown RBP eCLIP28■■■□□ 2.07
CLIP2-205ENST00000482424 LARP1Q6PKG0 1096 aaKnown RBP28■■■□□ 2.07
CLIP2-205ENST00000482424 THSD7AQ9UPZ6 1657 aa27.99■■■□□ 2.07
CLIP2-205ENST00000482424 EP400Q96L91 3159 aa27.98■■■□□ 2.07
CLIP2-205ENST00000482424 AXIN2Q9Y2T1 843 aa27.98■■■□□ 2.07
CLIP2-205ENST00000482424 OVOS2A0A0J9YW53 1432 aa27.98■■■□□ 2.07
CLIP2-205ENST00000482424 OVOS2Q6IE36 1432 aa27.98■■■□□ 2.07
CLIP2-205ENST00000482424 KRT27Q7Z3Y8 459 aa27.97■■■□□ 2.07
CLIP2-205ENST00000482424 ZBTB7CA1YPR0 619 aa27.96■■■□□ 2.07
CLIP2-205ENST00000482424 HSPA5P11021 654 aaKnown RBP27.96■■■□□ 2.07
CLIP2-205ENST00000482424 BARGINQ6ZT62 677 aa27.96■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms