RNA–Protein interactions for RNA: ENST00000481947.1

SNRNP25-206, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 25, humanhuman

TSL 5

Gene SNRNP25, Length 1,260 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP25-206ENST00000481947 USP54Q70EL1 1684 aa16.22■□□□□ 0.19
SNRNP25-206ENST00000481947 FYB1O15117 783 aa16.22■□□□□ 0.19
SNRNP25-206ENST00000481947 SLAIN2Q9P270 581 aa16.22■□□□□ 0.19
SNRNP25-206ENST00000481947 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.21■□□□□ 0.19
SNRNP25-206ENST00000481947 IQSEC2Q5JU85 1478 aa16.21■□□□□ 0.19
SNRNP25-206ENST00000481947 TTC21AQ8NDW8 1320 aa16.2■□□□□ 0.18
SNRNP25-206ENST00000481947 MARF1Q9Y4F3 1742 aaKnown RBP16.2■□□□□ 0.18
SNRNP25-206ENST00000481947 CCER2I3L3R5 266 aa16.2■□□□□ 0.18
SNRNP25-206ENST00000481947 MYBBP1AQ9BQG0 1328 aaKnown RBP16.19■□□□□ 0.18
SNRNP25-206ENST00000481947 BRINP3Q76B58 766 aa16.19■□□□□ 0.18
SNRNP25-206ENST00000481947 NME9Q86XW9 330 aa16.19■□□□□ 0.18
SNRNP25-206ENST00000481947 GGNBP2Q9H3C7 697 aa16.19■□□□□ 0.18
SNRNP25-206ENST00000481947 NHSL1Q5SYE7 1610 aa16.19■□□□□ 0.18
SNRNP25-206ENST00000481947 FOXO3O43524 673 aa16.18■□□□□ 0.18
SNRNP25-206ENST00000481947 OVOS2A0A0J9YW53 1432 aa16.18■□□□□ 0.18
SNRNP25-206ENST00000481947 OVOS2Q6IE36 1432 aa16.18■□□□□ 0.18
SNRNP25-206ENST00000481947 ALS2Q96Q42 1657 aa16.18■□□□□ 0.18
SNRNP25-206ENST00000481947 PXDNQ92626 1479 aa16.17■□□□□ 0.18
SNRNP25-206ENST00000481947 PSME1Q06323 249 aa16.17■□□□□ 0.18
SNRNP25-206ENST00000481947 MORC1Q86VD1 984 aa16.17■□□□□ 0.18
SNRNP25-206ENST00000481947 ROBO1Q9Y6N7 1651 aa16.17■□□□□ 0.18
SNRNP25-206ENST00000481947 USP31Q70CQ4 1352 aa16.16■□□□□ 0.18
SNRNP25-206ENST00000481947 ZRANB1Q9UGI0 708 aa16.16■□□□□ 0.18
SNRNP25-206ENST00000481947 NPHP3Q7Z494 1330 aa16.16■□□□□ 0.18
SNRNP25-206ENST00000481947 PPP2R1AP30153 589 aa16.15■□□□□ 0.18
SNRNP25-206ENST00000481947 KRT28Q7Z3Y7 464 aa16.15■□□□□ 0.18
SNRNP25-206ENST00000481947 CCDC184Q52MB2 194 aa16.14■□□□□ 0.17
SNRNP25-206ENST00000481947 NLRP13Q86W25 1043 aa16.14■□□□□ 0.17
SNRNP25-206ENST00000481947 SCAF1Q9H7N4 1312 aaKnown RBP16.14■□□□□ 0.17
SNRNP25-206ENST00000481947 SBNO1A3KN83 1393 aa16.13■□□□□ 0.17
SNRNP25-206ENST00000481947 XPCQ01831 940 aaPredicted RBP16.13■□□□□ 0.17
SNRNP25-206ENST00000481947 DDX17Q92841 729 aaKnown RBP16.13■□□□□ 0.17
SNRNP25-206ENST00000481947 COG3Q96JB2 828 aa16.13■□□□□ 0.17
SNRNP25-206ENST00000481947 PAK3O75914 559 aaPredicted RBP16.12■□□□□ 0.17
SNRNP25-206ENST00000481947 MAP2P11137 1827 aaKnown RBP16.12■□□□□ 0.17
SNRNP25-206ENST00000481947 AHDC1Q5TGY3 1603 aaPredicted RBP16.12■□□□□ 0.17
SNRNP25-206ENST00000481947 CERKQ8TCT0 537 aa16.11■□□□□ 0.17
SNRNP25-206ENST00000481947 TNS3Q68CZ2 1445 aa16.11■□□□□ 0.17
SNRNP25-206ENST00000481947 TNNT2P45379 298 aaPredicted RBP16.1■□□□□ 0.17
SNRNP25-206ENST00000481947 ABTB2Q8N961 1025 aa16.1■□□□□ 0.17
SNRNP25-206ENST00000481947 SOS2Q07890 1332 aaPredicted RBP16.1■□□□□ 0.17
SNRNP25-206ENST00000481947 CRYBG1Q9Y4K1 1723 aa16.1■□□□□ 0.17
SNRNP25-206ENST00000481947 AATKQ6ZMQ8 1374 aa16.1■□□□□ 0.17
SNRNP25-206ENST00000481947 MRS2Q9HD23 443 aa16.09■□□□□ 0.17
SNRNP25-206ENST00000481947 SMG6Q86US8 1419 aaKnown RBP16.09■□□□□ 0.17
SNRNP25-206ENST00000481947 SLIT3O75094 1523 aa16.09■□□□□ 0.17
SNRNP25-206ENST00000481947 TOM1O60784 492 aa16.08■□□□□ 0.16
SNRNP25-206ENST00000481947 NLRP6P59044 892 aa16.08■□□□□ 0.16
SNRNP25-206ENST00000481947 MED1Q15648 1581 aaPredicted RBP16.08■□□□□ 0.16
SNRNP25-206ENST00000481947 NUTM2GQ5VZR2 741 aa16.07■□□□□ 0.16
SNRNP25-206ENST00000481947 SPATA31A3Q5VYP0 1347 aa16.07■□□□□ 0.16
SNRNP25-206ENST00000481947 NFAT5O94916 1531 aa16.07■□□□□ 0.16
SNRNP25-206ENST00000481947 PHRF1Q9P1Y6 1649 aaKnown RBP16.07■□□□□ 0.16
SNRNP25-206ENST00000481947 PHLPP1O60346 1717 aa16.06■□□□□ 0.16
SNRNP25-206ENST00000481947 USP19O94966 1318 aa16.06■□□□□ 0.16
SNRNP25-206ENST00000481947 PEAK1Q9H792 1746 aa16.05■□□□□ 0.16
SNRNP25-206ENST00000481947 SHPRHQ149N8 1683 aa16.05■□□□□ 0.16
SNRNP25-206ENST00000481947 ARHGEF10O15013 1369 aa16.05■□□□□ 0.16
SNRNP25-206ENST00000481947 UBAP1LF5GYI3 381 aa16.05■□□□□ 0.16
SNRNP25-206ENST00000481947 FBLN1P23142 703 aa16.05■□□□□ 0.16
SNRNP25-206ENST00000481947 MTHFSP49914 203 aa16.05■□□□□ 0.16
SNRNP25-206ENST00000481947 POLKQ9UBT6 870 aa16.05■□□□□ 0.16
SNRNP25-206ENST00000481947 COL16A1Q07092 1604 aaPredicted RBP16.05■□□□□ 0.16
SNRNP25-206ENST00000481947 COL3A1P02461 1466 aaPredicted RBP16.04■□□□□ 0.16
SNRNP25-206ENST00000481947 LTN1O94822 1766 aa16.04■□□□□ 0.16
SNRNP25-206ENST00000481947 ABCA3Q99758 1704 aa16.04■□□□□ 0.16
SNRNP25-206ENST00000481947 CDK12Q9NYV4 1490 aaPredicted RBP16.03■□□□□ 0.16
SNRNP25-206ENST00000481947 INSRP06213 1382 aa16.03■□□□□ 0.16
SNRNP25-206ENST00000481947 PNPLA6Q8IY17 1366 aa16.03■□□□□ 0.16
SNRNP25-206ENST00000481947 LMOD2Q6P5Q4 547 aa16.03■□□□□ 0.16
SNRNP25-206ENST00000481947 RRS1Q15050 365 aaKnown RBP16.02■□□□□ 0.16
SNRNP25-206ENST00000481947 PNISRQ8TF01 805 aaKnown RBP16.02■□□□□ 0.16
SNRNP25-206ENST00000481947 EMILIN1Q9Y6C2 1016 aa16.02■□□□□ 0.16
SNRNP25-206ENST00000481947 PIP4K2BP78356 416 aa16.01■□□□□ 0.15
SNRNP25-206ENST00000481947 COL22A1Q8NFW1 1626 aaPredicted RBP16.01■□□□□ 0.15
SNRNP25-206ENST00000481947 KCNH5Q8NCM2 988 aa16■□□□□ 0.15
SNRNP25-206ENST00000481947 CFAP53Q96M91 514 aa16■□□□□ 0.15
SNRNP25-206ENST00000481947 MAP3K19Q56UN5 1328 aa15.99■□□□□ 0.15
SNRNP25-206ENST00000481947 SOX12O15370 315 aa15.99■□□□□ 0.15
SNRNP25-206ENST00000481947 GCP02774 474 aa15.99■□□□□ 0.15
SNRNP25-206ENST00000481947 KIF24Q5T7B8 1368 aa15.99■□□□□ 0.15
SNRNP25-206ENST00000481947 FAM9BQ8IZU0 186 aa15.97■□□□□ 0.15
SNRNP25-206ENST00000481947 LRRC59Q96AG4 307 aaKnown RBP15.97■□□□□ 0.15
SNRNP25-206ENST00000481947 RTL1A6NKG5 1358 aa15.97■□□□□ 0.15
SNRNP25-206ENST00000481947 FLT4P35916 1363 aa15.97■□□□□ 0.15
SNRNP25-206ENST00000481947 PPM1GO15355 546 aaPredicted RBP15.96■□□□□ 0.15
SNRNP25-206ENST00000481947 COL18A1P39060 1754 aa15.95■□□□□ 0.14
SNRNP25-206ENST00000481947 ARHGEF25Q86VW2 580 aa15.95■□□□□ 0.14
SNRNP25-206ENST00000481947 CABLES1Q8TDN4 633 aa15.95■□□□□ 0.14
SNRNP25-206ENST00000481947 RGPD1P0DJD0 1748 aa15.94■□□□□ 0.14
SNRNP25-206ENST00000481947 PLEKHG5O94827 1062 aa15.94■□□□□ 0.14
SNRNP25-206ENST00000481947 ABCC6O95255 1503 aa15.94■□□□□ 0.14
SNRNP25-206ENST00000481947 RGPD5Q99666 1765 aa15.93■□□□□ 0.14
SNRNP25-206ENST00000481947 CPDO75976 1380 aa15.93■□□□□ 0.14
SNRNP25-206ENST00000481947 DIAPH1O60610 1272 aaKnown RBP15.93■□□□□ 0.14
SNRNP25-206ENST00000481947 HOXC9P31274 260 aa15.93■□□□□ 0.14
SNRNP25-206ENST00000481947 AMPHP49418 695 aa15.93■□□□□ 0.14
SNRNP25-206ENST00000481947 WDR43Q15061 677 aaKnown RBP eCLIP15.93■□□□□ 0.14
SNRNP25-206ENST00000481947 BLMP54132 1417 aaPredicted RBP15.93■□□□□ 0.14
SNRNP25-206ENST00000481947 IL13P35225 146 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms