RNA–Protein interactions for RNA: ENST00000481875.1

GARNL3-217, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 639 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-217ENST00000481875 CRYBG1Q9Y4K1 1723 aa16.88■□□□□ 0.29
GARNL3-217ENST00000481875 HAP1P54257 671 aaPredicted RBP16.88■□□□□ 0.29
GARNL3-217ENST00000481875 ZRANB1Q9UGI0 708 aa16.88■□□□□ 0.29
GARNL3-217ENST00000481875 SEPT12Q8IYM1 358 aa16.87■□□□□ 0.29
GARNL3-217ENST00000481875 KDM2AQ9Y2K7 1162 aa16.87■□□□□ 0.29
GARNL3-217ENST00000481875 COL14A1Q05707 1796 aaKnown RBP16.87■□□□□ 0.29
GARNL3-217ENST00000481875 MINK1Q8N4C8 1332 aaPredicted RBP16.86■□□□□ 0.29
GARNL3-217ENST00000481875 HIRIP3Q9BW71 556 aaPredicted RBP16.85■□□□□ 0.29
GARNL3-217ENST00000481875 LMOD2Q6P5Q4 547 aa16.84■□□□□ 0.29
GARNL3-217ENST00000481875 ATP7BP35670 1465 aa16.84■□□□□ 0.29
GARNL3-217ENST00000481875 POLR3AO14802 1390 aaPredicted RBP16.82■□□□□ 0.28
GARNL3-217ENST00000481875 KRT27Q7Z3Y8 459 aa16.82■□□□□ 0.28
GARNL3-217ENST00000481875 NGDNQ8NEJ9 315 aaKnown RBP16.82■□□□□ 0.28
GARNL3-217ENST00000481875 NUDT16Q96DE0 195 aaKnown RBP16.81■□□□□ 0.28
GARNL3-217ENST00000481875 BTG4Q9NY30 223 aa16.81■□□□□ 0.28
GARNL3-217ENST00000481875 TOPAZ1Q8N9V7 1692 aa16.8■□□□□ 0.28
GARNL3-217ENST00000481875 SPATA31A5Q5VU36 1347 aa16.79■□□□□ 0.28
GARNL3-217ENST00000481875 SPATA31A7Q8IWB4 1347 aa16.79■□□□□ 0.28
GARNL3-217ENST00000481875 PLEKHG3A1L390 1219 aa16.79■□□□□ 0.28
GARNL3-217ENST00000481875 PCGF6Q9BYE7 350 aa16.79■□□□□ 0.28
GARNL3-217ENST00000481875 CCDC61Q9Y6R9 512 aa16.79■□□□□ 0.28
GARNL3-217ENST00000481875 CDK19Q9BWU1 502 aa16.78■□□□□ 0.28
GARNL3-217ENST00000481875 SF3B2Q13435 895 aaKnown RBP16.77■□□□□ 0.28
GARNL3-217ENST00000481875 RNF216Q9NWF9 866 aaPredicted RBP16.77■□□□□ 0.28
GARNL3-217ENST00000481875 CCDC9Q9Y3X0 531 aaKnown RBP16.77■□□□□ 0.28
GARNL3-217ENST00000481875 THSD7AQ9UPZ6 1657 aa16.77■□□□□ 0.28
GARNL3-217ENST00000481875 PHRF1Q9P1Y6 1649 aaKnown RBP16.75■□□□□ 0.27
GARNL3-217ENST00000481875 FAM98CQ17RN3 349 aaKnown RBP16.75■□□□□ 0.27
GARNL3-217ENST00000481875 NBPF8Q3BBV2 869 aa16.75■□□□□ 0.27
GARNL3-217ENST00000481875 DEFB132Q7Z7B7 95 aa16.75■□□□□ 0.27
GARNL3-217ENST00000481875 PRDM11Q9NQV5 511 aa16.75■□□□□ 0.27
GARNL3-217ENST00000481875 BRD4O60885 1362 aaPredicted RBP16.75■□□□□ 0.27
GARNL3-217ENST00000481875 DISP2A7MBM2 1401 aa16.74■□□□□ 0.27
GARNL3-217ENST00000481875 PAK3O75914 559 aaPredicted RBP16.74■□□□□ 0.27
GARNL3-217ENST00000481875 RGPD1P0DJD0 1748 aa16.73■□□□□ 0.27
GARNL3-217ENST00000481875 ACEP12821 1306 aa16.73■□□□□ 0.27
GARNL3-217ENST00000481875 SPATA31A1Q5TZJ5 1347 aa16.73■□□□□ 0.27
GARNL3-217ENST00000481875 PLEKHG5O94827 1062 aa16.72■□□□□ 0.27
GARNL3-217ENST00000481875 NBPF1Q3BBV0 1214 aa16.72■□□□□ 0.27
GARNL3-217ENST00000481875 CPDO75976 1380 aa16.72■□□□□ 0.27
GARNL3-217ENST00000481875 KIAA0232Q92628 1395 aa16.72■□□□□ 0.27
GARNL3-217ENST00000481875 BAG6P46379 1132 aa16.71■□□□□ 0.27
GARNL3-217ENST00000481875 USP19O94966 1318 aa16.7■□□□□ 0.26
GARNL3-217ENST00000481875 LRP5O75197 1615 aa16.7■□□□□ 0.26
GARNL3-217ENST00000481875 BARGINQ6ZT62 677 aa16.7■□□□□ 0.26
GARNL3-217ENST00000481875 CENPJQ9HC77 1338 aaPredicted RBP16.69■□□□□ 0.26
GARNL3-217ENST00000481875 LMO7Q8WWI1 1683 aa16.69■□□□□ 0.26
GARNL3-217ENST00000481875 NRKQ7Z2Y5 1582 aa16.68■□□□□ 0.26
GARNL3-217ENST00000481875 TNS1Q9HBL0 1735 aaKnown RBP16.67■□□□□ 0.26
GARNL3-217ENST00000481875 FAM196AQ6ZSG2 479 aa16.67■□□□□ 0.26
GARNL3-217ENST00000481875 ABTB2Q8N961 1025 aa16.67■□□□□ 0.26
GARNL3-217ENST00000481875 CAMTA1Q9Y6Y1 1673 aa16.66■□□□□ 0.26
GARNL3-217ENST00000481875 A0A0G2JS52 829 aa16.66■□□□□ 0.26
GARNL3-217ENST00000481875 MYT1Q01538 1121 aa16.66■□□□□ 0.26
GARNL3-217ENST00000481875 SSH2Q76I76 1423 aa16.66■□□□□ 0.26
GARNL3-217ENST00000481875 NLRP13Q86W25 1043 aa16.66■□□□□ 0.26
GARNL3-217ENST00000481875 PPIP5K1Q6PFW1 1433 aa16.65■□□□□ 0.26
GARNL3-217ENST00000481875 ZC3H6P61129 1189 aaKnown RBP16.65■□□□□ 0.26
GARNL3-217ENST00000481875 CHRNA2Q15822 529 aa16.65■□□□□ 0.26
GARNL3-217ENST00000481875 THRAP3Q9Y2W1 955 aaKnown RBP16.65■□□□□ 0.26
GARNL3-217ENST00000481875 QRICH2Q9H0J4 1663 aa16.65■□□□□ 0.26
GARNL3-217ENST00000481875 GCP02774 474 aa16.64■□□□□ 0.25
GARNL3-217ENST00000481875 PARD3Q8TEW0 1356 aa16.64■□□□□ 0.25
GARNL3-217ENST00000481875 SRPK2P78362 688 aaKnown RBP16.63■□□□□ 0.25
GARNL3-217ENST00000481875 USP6P35125 1406 aa16.62■□□□□ 0.25
GARNL3-217ENST00000481875 C11orf95C9JLR9 678 aaPredicted RBP16.62■□□□□ 0.25
GARNL3-217ENST00000481875 EVA1CP58658 441 aa16.62■□□□□ 0.25
GARNL3-217ENST00000481875 EN1Q05925 392 aaPredicted RBP16.62■□□□□ 0.25
GARNL3-217ENST00000481875 NUTM2GQ5VZR2 741 aa16.62■□□□□ 0.25
GARNL3-217ENST00000481875 TCP11L2Q8N4U5 519 aa16.62■□□□□ 0.25
GARNL3-217ENST00000481875 L3MBTL2Q969R5 705 aa16.62■□□□□ 0.25
GARNL3-217ENST00000481875 CAMKK2Q96RR4 588 aa16.62■□□□□ 0.25
GARNL3-217ENST00000481875 TRPM1Q7Z4N2 1603 aa16.62■□□□□ 0.25
GARNL3-217ENST00000481875 FAM182BQ5T319 152 aa16.61■□□□□ 0.25
GARNL3-217ENST00000481875 STRN4Q9NRL3 753 aa16.61■□□□□ 0.25
GARNL3-217ENST00000481875 PARP4Q9UKK3 1724 aaKnown RBP16.61■□□□□ 0.25
GARNL3-217ENST00000481875 SLIT3O75094 1523 aa16.6■□□□□ 0.25
GARNL3-217ENST00000481875 CABP2Q9NPB3 220 aa16.6■□□□□ 0.25
GARNL3-217ENST00000481875 CABP1Q9NZU7 370 aa16.6■□□□□ 0.25
GARNL3-217ENST00000481875 AATKQ6ZMQ8 1374 aa16.6■□□□□ 0.25
GARNL3-217ENST00000481875 COL5A2P05997 1499 aaPredicted RBP16.6■□□□□ 0.25
GARNL3-217ENST00000481875 LARP1Q6PKG0 1096 aaKnown RBP16.59■□□□□ 0.25
GARNL3-217ENST00000481875 ZNF692Q9BU19 519 aaPredicted RBP16.59■□□□□ 0.25
GARNL3-217ENST00000481875 EVC2Q86UK5 1308 aa16.59■□□□□ 0.25
GARNL3-217ENST00000481875 COL18A1P39060 1754 aa16.59■□□□□ 0.25
GARNL3-217ENST00000481875 CRB1P82279 1406 aa16.57■□□□□ 0.24
GARNL3-217ENST00000481875 TRIM37O94972 964 aa16.57■□□□□ 0.24
GARNL3-217ENST00000481875 PDE3BQ13370 1112 aa16.57■□□□□ 0.24
GARNL3-217ENST00000481875 AKAP12Q02952 1782 aa16.56■□□□□ 0.24
GARNL3-217ENST00000481875 RREB1Q92766 1687 aa16.56■□□□□ 0.24
GARNL3-217ENST00000481875 NLRP6P59044 892 aa16.56■□□□□ 0.24
GARNL3-217ENST00000481875 PIK3C2AO00443 1686 aa16.56■□□□□ 0.24
GARNL3-217ENST00000481875 SBNO2Q9Y2G9 1366 aa16.55■□□□□ 0.24
GARNL3-217ENST00000481875 PSDA5PKW4 1024 aaPredicted RBP16.55■□□□□ 0.24
GARNL3-217ENST00000481875 EZH2Q15910 746 aaKnown RBP16.55■□□□□ 0.24
GARNL3-217ENST00000481875 USP35Q9P2H5 1018 aa16.55■□□□□ 0.24
GARNL3-217ENST00000481875 CPSF1Q10570 1443 aaKnown RBP16.54■□□□□ 0.24
GARNL3-217ENST00000481875 PEAK1Q9H792 1746 aa16.54■□□□□ 0.24
GARNL3-217ENST00000481875 SBF2Q86WG5 1849 aa16.54■□□□□ 0.24
GARNL3-217ENST00000481875 RGPD3A6NKT7 1758 aaPredicted RBP16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms