RNA–Protein interactions for RNA: ENST00000481739.1

RXRA-202, Transcript of retinoid X receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RXRA, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-202ENST00000481739 ACEP12821 1306 aa20.82■□□□□ 0.92
RXRA-202ENST00000481739 TNNT2P45379 298 aaPredicted RBP20.81■□□□□ 0.92
RXRA-202ENST00000481739 DMRT2Q9Y5R5 561 aa20.81■□□□□ 0.92
RXRA-202ENST00000481739 AKAP12Q02952 1782 aa20.81■□□□□ 0.92
RXRA-202ENST00000481739 GGNBP2Q9H3C7 697 aa20.81■□□□□ 0.92
RXRA-202ENST00000481739 TMEM94Q12767 1356 aa20.8■□□□□ 0.92
RXRA-202ENST00000481739 ZNF521Q96K83 1311 aa20.8■□□□□ 0.92
RXRA-202ENST00000481739 IRX6P78412 446 aaPredicted RBP20.8■□□□□ 0.92
RXRA-202ENST00000481739 NGDNQ8NEJ9 315 aaKnown RBP20.8■□□□□ 0.92
RXRA-202ENST00000481739 RCAN3Q9UKA8 241 aa20.8■□□□□ 0.92
RXRA-202ENST00000481739 ANKRD26Q9UPS8 1709 aa20.79■□□□□ 0.92
RXRA-202ENST00000481739 EDC4Q6P2E9 1401 aaKnown RBP20.79■□□□□ 0.92
RXRA-202ENST00000481739 KIF20BQ96Q89 1820 aa20.79■□□□□ 0.92
RXRA-202ENST00000481739 FYB1O15117 783 aa20.78■□□□□ 0.92
RXRA-202ENST00000481739 MON2Q7Z3U7 1717 aa20.78■□□□□ 0.92
RXRA-202ENST00000481739 C19orf44Q9H6X5 657 aa20.78■□□□□ 0.92
RXRA-202ENST00000481739 SALL2Q9Y467 1007 aaPredicted RBP20.78■□□□□ 0.92
RXRA-202ENST00000481739 ZNF335Q9H4Z2 1342 aaPredicted RBP20.77■□□□□ 0.92
RXRA-202ENST00000481739 SHPRHQ149N8 1683 aa20.76■□□□□ 0.91
RXRA-202ENST00000481739 GOLGA2Q08379 1002 aa20.76■□□□□ 0.91
RXRA-202ENST00000481739 NCBP3Q53F19 620 aaKnown RBP20.76■□□□□ 0.91
RXRA-202ENST00000481739 MTHFSP49914 203 aa20.75■□□□□ 0.91
RXRA-202ENST00000481739 ESCO1Q5FWF5 840 aa20.75■□□□□ 0.91
RXRA-202ENST00000481739 SENP3-EIF4A1A0A087X0R7 540 aa20.74■□□□□ 0.91
RXRA-202ENST00000481739 ATF3P18847 181 aa20.74■□□□□ 0.91
RXRA-202ENST00000481739 RRP1P56182 461 aaKnown RBP20.74■□□□□ 0.91
RXRA-202ENST00000481739 PHF8Q9UPP1 1060 aa20.74■□□□□ 0.91
RXRA-202ENST00000481739 NCOA3Q9Y6Q9 1424 aa20.73■□□□□ 0.91
RXRA-202ENST00000481739 NME9Q86XW9 330 aa20.73■□□□□ 0.91
RXRA-202ENST00000481739 CDCA7LQ96GN5 454 aa20.73■□□□□ 0.91
RXRA-202ENST00000481739 USP6P35125 1406 aa20.73■□□□□ 0.91
RXRA-202ENST00000481739 TTC21BQ7Z4L5 1316 aa20.72■□□□□ 0.91
RXRA-202ENST00000481739 RUNDC1Q96C34 613 aa20.71■□□□□ 0.91
RXRA-202ENST00000481739 MSH6P52701 1360 aa20.7■□□□□ 0.9
RXRA-202ENST00000481739 APAF1O14727 1248 aa20.7■□□□□ 0.9
RXRA-202ENST00000481739 ZRANB1Q9UGI0 708 aa20.69■□□□□ 0.9
RXRA-202ENST00000481739 LRRC7Q96NW7 1537 aa20.69■□□□□ 0.9
RXRA-202ENST00000481739 NRKQ7Z2Y5 1582 aa20.69■□□□□ 0.9
RXRA-202ENST00000481739 DUSP27Q5VZP5 1158 aa20.69■□□□□ 0.9
RXRA-202ENST00000481739 COG3Q96JB2 828 aa20.69■□□□□ 0.9
RXRA-202ENST00000481739 ORAI2Q96SN7 254 aa20.69■□□□□ 0.9
RXRA-202ENST00000481739 XIRP1Q702N8 1843 aaKnown RBP20.69■□□□□ 0.9
RXRA-202ENST00000481739 E9PSI1 815 aa20.68■□□□□ 0.9
RXRA-202ENST00000481739 SLFN5Q08AF3 891 aa20.68■□□□□ 0.9
RXRA-202ENST00000481739 CADPS2Q86UW7 1296 aa20.68■□□□□ 0.9
RXRA-202ENST00000481739 CCDC146Q8IYE0 955 aa20.68■□□□□ 0.9
RXRA-202ENST00000481739 TRMT2AQ8IZ69 625 aaKnown RBP20.67■□□□□ 0.9
RXRA-202ENST00000481739 DCCP43146 1447 aa20.67■□□□□ 0.9
RXRA-202ENST00000481739 IQSEC2Q5JU85 1478 aa20.67■□□□□ 0.9
RXRA-202ENST00000481739 PSME1Q06323 249 aa20.67■□□□□ 0.9
RXRA-202ENST00000481739 C1orf167Q5SNV9 1468 aa20.66■□□□□ 0.9
RXRA-202ENST00000481739 TTC21AQ8NDW8 1320 aa20.66■□□□□ 0.9
RXRA-202ENST00000481739 PAK3O75914 559 aaPredicted RBP20.66■□□□□ 0.9
RXRA-202ENST00000481739 COL3A1P02461 1466 aaPredicted RBP20.65■□□□□ 0.9
RXRA-202ENST00000481739 PNPLA6Q8IY17 1366 aa20.65■□□□□ 0.9
RXRA-202ENST00000481739 CCDC27Q2M243 656 aa20.64■□□□□ 0.9
RXRA-202ENST00000481739 TSHZ2Q9NRE2 1034 aa20.64■□□□□ 0.9
RXRA-202ENST00000481739 SSH2Q76I76 1423 aa20.64■□□□□ 0.89
RXRA-202ENST00000481739 MST1RQ04912 1400 aa20.63■□□□□ 0.89
RXRA-202ENST00000481739 AEBP2Q6ZN18 517 aaPredicted RBP20.62■□□□□ 0.89
RXRA-202ENST00000481739 FOXO3O43524 673 aa20.62■□□□□ 0.89
RXRA-202ENST00000481739 PHF23Q9BUL5 403 aaPredicted RBP20.62■□□□□ 0.89
RXRA-202ENST00000481739 PNNQ9H307 717 aaKnown RBP20.62■□□□□ 0.89
RXRA-202ENST00000481739 FBLN1P23142 703 aa20.61■□□□□ 0.89
RXRA-202ENST00000481739 PPM1GO15355 546 aaPredicted RBP20.6■□□□□ 0.89
RXRA-202ENST00000481739 WWC1Q8IX03 1113 aa20.6■□□□□ 0.89
RXRA-202ENST00000481739 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.6■□□□□ 0.89
RXRA-202ENST00000481739 KIF1AQ12756 1690 aa20.6■□□□□ 0.89
RXRA-202ENST00000481739 AATKQ6ZMQ8 1374 aa20.6■□□□□ 0.89
RXRA-202ENST00000481739 U2AF1L5P0DN76 240 aaPredicted RBP20.6■□□□□ 0.89
RXRA-202ENST00000481739 U2AF1Q01081 240 aaKnown RBP eCLIP20.6■□□□□ 0.89
RXRA-202ENST00000481739 B4GALNT3Q6L9W6 998 aa20.6■□□□□ 0.89
RXRA-202ENST00000481739 WDR63Q8IWG1 891 aa20.6■□□□□ 0.89
RXRA-202ENST00000481739 ABTB2Q8N961 1025 aa20.6■□□□□ 0.89
RXRA-202ENST00000481739 CCDC136Q96JN2 1154 aa20.6■□□□□ 0.89
RXRA-202ENST00000481739 MAP2P11137 1827 aaKnown RBP20.59■□□□□ 0.89
RXRA-202ENST00000481739 XPCQ01831 940 aaPredicted RBP20.59■□□□□ 0.89
RXRA-202ENST00000481739 NUTM2GQ5VZR2 741 aa20.59■□□□□ 0.89
RXRA-202ENST00000481739 TCP11L2Q8N4U5 519 aa20.59■□□□□ 0.89
RXRA-202ENST00000481739 NLRP6P59044 892 aa20.58■□□□□ 0.89
RXRA-202ENST00000481739 OVOS2A0A0J9YW53 1432 aa20.58■□□□□ 0.88
RXRA-202ENST00000481739 OVOS2Q6IE36 1432 aa20.58■□□□□ 0.88
RXRA-202ENST00000481739 PIK3C2AO00443 1686 aa20.58■□□□□ 0.88
RXRA-202ENST00000481739 SOX12O15370 315 aa20.57■□□□□ 0.88
RXRA-202ENST00000481739 POLKQ9UBT6 870 aa20.57■□□□□ 0.88
RXRA-202ENST00000481739 DIAPH1O60610 1272 aaKnown RBP20.56■□□□□ 0.88
RXRA-202ENST00000481739 KRT28Q7Z3Y7 464 aa20.56■□□□□ 0.88
RXRA-202ENST00000481739 RRS1Q15050 365 aaKnown RBP20.55■□□□□ 0.88
RXRA-202ENST00000481739 USP31Q70CQ4 1352 aa20.55■□□□□ 0.88
RXRA-202ENST00000481739 EMILIN1Q9Y6C2 1016 aa20.55■□□□□ 0.88
RXRA-202ENST00000481739 CDK12Q9NYV4 1490 aaPredicted RBP20.54■□□□□ 0.88
RXRA-202ENST00000481739 LMOD2Q6P5Q4 547 aa20.54■□□□□ 0.88
RXRA-202ENST00000481739 SLAIN2Q9P270 581 aa20.54■□□□□ 0.88
RXRA-202ENST00000481739 DDX17Q92841 729 aaKnown RBP20.52■□□□□ 0.88
RXRA-202ENST00000481739 MAPK8IP3Q9UPT6 1336 aa20.52■□□□□ 0.88
RXRA-202ENST00000481739 U2SURPO15042 1029 aaKnown RBP20.51■□□□□ 0.87
RXRA-202ENST00000481739 PLEKHF1Q96S99 279 aa20.51■□□□□ 0.87
RXRA-202ENST00000481739 FCHSD2O94868 740 aa20.5■□□□□ 0.87
RXRA-202ENST00000481739 NPHP3Q7Z494 1330 aa20.5■□□□□ 0.87
RXRA-202ENST00000481739 PLEKHG5O94827 1062 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 196.4 ms