RNA–Protein interactions for RNA: ENST00000481492.1

PTPN18-211, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 2

Gene PTPN18, Length 1,394 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-211ENST00000481492 RXRBP28702 533 aa29.2■■■□□ 2.26
PTPN18-211ENST00000481492 BCL9LQ86UU0 1499 aa29.19■■■□□ 2.26
PTPN18-211ENST00000481492 CCER1Q8TC90 406 aaPredicted RBP29.19■■■□□ 2.26
PTPN18-211ENST00000481492 MARF1Q9Y4F3 1742 aaKnown RBP29.18■■■□□ 2.26
PTPN18-211ENST00000481492 TESK2Q96S53 571 aa29.15■■■□□ 2.26
PTPN18-211ENST00000481492 ABCA3Q99758 1704 aa29.15■■■□□ 2.26
PTPN18-211ENST00000481492 ST20-MTHFSA0A0A6YYL1 179 aa29.14■■■□□ 2.26
PTPN18-211ENST00000481492 HAP1P54257 671 aaPredicted RBP29.14■■■□□ 2.26
PTPN18-211ENST00000481492 NUTM2GQ5VZR2 741 aa29.14■■■□□ 2.26
PTPN18-211ENST00000481492 FAM83GA6ND36 823 aa29.13■■■□□ 2.25
PTPN18-211ENST00000481492 SLIT2O94813 1529 aa29.13■■■□□ 2.25
PTPN18-211ENST00000481492 RBM6P78332 1123 aaKnown RBP29.13■■■□□ 2.25
PTPN18-211ENST00000481492 ATRNO75882 1429 aa29.12■■■□□ 2.25
PTPN18-211ENST00000481492 TRPC5Q9UL62 973 aaPredicted RBP29.11■■■□□ 2.25
PTPN18-211ENST00000481492 CRYBG1Q9Y4K1 1723 aa29.09■■■□□ 2.25
PTPN18-211ENST00000481492 UNC5CLQ8IV45 518 aa29.09■■■□□ 2.25
PTPN18-211ENST00000481492 USP6P35125 1406 aa29.09■■■□□ 2.25
PTPN18-211ENST00000481492 SSH2Q76I76 1423 aa29.09■■■□□ 2.25
PTPN18-211ENST00000481492 SRCAPQ6ZRS2 3230 aa29.09■■■□□ 2.25
PTPN18-211ENST00000481492 ABTB2Q8N961 1025 aa29.08■■■□□ 2.25
PTPN18-211ENST00000481492 ATAD2Q6PL18 1390 aa29.07■■■□□ 2.24
PTPN18-211ENST00000481492 CDK12Q9NYV4 1490 aaPredicted RBP29.06■■■□□ 2.24
PTPN18-211ENST00000481492 CPSF1Q10570 1443 aaKnown RBP29.05■■■□□ 2.24
PTPN18-211ENST00000481492 BRD4O60885 1362 aaPredicted RBP29.05■■■□□ 2.24
PTPN18-211ENST00000481492 RGS12O14924 1447 aa29.04■■■□□ 2.24
PTPN18-211ENST00000481492 USP47Q96K76 1375 aa29.04■■■□□ 2.24
PTPN18-211ENST00000481492 GJD4Q96KN9 370 aaPredicted RBP29.02■■■□□ 2.24
PTPN18-211ENST00000481492 ZNF692Q9BU19 519 aaPredicted RBP29.02■■■□□ 2.24
PTPN18-211ENST00000481492 SLC12A5Q9H2X9 1139 aa29.02■■■□□ 2.24
PTPN18-211ENST00000481492 USP19O94966 1318 aa29.02■■■□□ 2.24
PTPN18-211ENST00000481492 PUS7Q96PZ0 661 aaKnown RBP29.01■■■□□ 2.24
PTPN18-211ENST00000481492 CD163L1Q9NR16 1453 aa29■■■□□ 2.23
PTPN18-211ENST00000481492 TTC21BQ7Z4L5 1316 aa29■■■□□ 2.23
PTPN18-211ENST00000481492 ZC3H6P61129 1189 aaKnown RBP29■■■□□ 2.23
PTPN18-211ENST00000481492 KIAA0232Q92628 1395 aa28.99■■■□□ 2.23
PTPN18-211ENST00000481492 NLRP13Q86W25 1043 aa28.99■■■□□ 2.23
PTPN18-211ENST00000481492 BTG4Q9NY30 223 aa28.99■■■□□ 2.23
PTPN18-211ENST00000481492 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.98■■■□□ 2.23
PTPN18-211ENST00000481492 PLCH1Q4KWH8 1693 aa28.98■■■□□ 2.23
PTPN18-211ENST00000481492 PHRF1Q9P1Y6 1649 aaKnown RBP28.98■■■□□ 2.23
PTPN18-211ENST00000481492 VPS72Q15906 364 aa28.98■■■□□ 2.23
PTPN18-211ENST00000481492 CHRNA2Q15822 529 aa28.97■■■□□ 2.23
PTPN18-211ENST00000481492 TMC1Q8TDI8 760 aa28.97■■■□□ 2.23
PTPN18-211ENST00000481492 PRDM11Q9NQV5 511 aa28.97■■■□□ 2.23
PTPN18-211ENST00000481492 AKAP12Q02952 1782 aa28.96■■■□□ 2.23
PTPN18-211ENST00000481492 KTN1Q86UP2 1357 aaKnown RBP28.96■■■□□ 2.23
PTPN18-211ENST00000481492 GCP02774 474 aa28.96■■■□□ 2.23
PTPN18-211ENST00000481492 NLRP6P59044 892 aa28.96■■■□□ 2.23
PTPN18-211ENST00000481492 GLI3P10071 1580 aa28.95■■■□□ 2.23
PTPN18-211ENST00000481492 NWD2Q9ULI1 1742 aa28.95■■■□□ 2.23
PTPN18-211ENST00000481492 COL14A1Q05707 1796 aaKnown RBP28.93■■■□□ 2.22
PTPN18-211ENST00000481492 NRKQ7Z2Y5 1582 aa28.92■■■□□ 2.22
PTPN18-211ENST00000481492 PIK3C2AO00443 1686 aa28.92■■■□□ 2.22
PTPN18-211ENST00000481492 SLC24A1O60721 1099 aa28.91■■■□□ 2.22
PTPN18-211ENST00000481492 NRAPQ86VF7 1730 aa28.91■■■□□ 2.22
PTPN18-211ENST00000481492 ZRANB1Q9UGI0 708 aa28.9■■■□□ 2.22
PTPN18-211ENST00000481492 TTC21AQ8NDW8 1320 aa28.9■■■□□ 2.22
PTPN18-211ENST00000481492 CPDO75976 1380 aa28.9■■■□□ 2.22
PTPN18-211ENST00000481492 TMF1P82094 1093 aa28.88■■■□□ 2.21
PTPN18-211ENST00000481492 ONECUT3O60422 494 aaPredicted RBP28.88■■■□□ 2.21
PTPN18-211ENST00000481492 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.88■■■□□ 2.21
PTPN18-211ENST00000481492 MON2Q7Z3U7 1717 aa28.87■■■□□ 2.21
PTPN18-211ENST00000481492 A0A1W2PP64 1363 aa28.87■■■□□ 2.21
PTPN18-211ENST00000481492 SLIT3O75094 1523 aa28.87■■■□□ 2.21
PTPN18-211ENST00000481492 CCDC9Q9Y3X0 531 aaKnown RBP28.87■■■□□ 2.21
PTPN18-211ENST00000481492 HDGFL2Q7Z4V5 671 aaPredicted RBP28.86■■■□□ 2.21
PTPN18-211ENST00000481492 NME9Q86XW9 330 aa28.85■■■□□ 2.21
PTPN18-211ENST00000481492 TERF2IPQ9NYB0 399 aa28.85■■■□□ 2.21
PTPN18-211ENST00000481492 CAMTA1Q9Y6Y1 1673 aa28.85■■■□□ 2.21
PTPN18-211ENST00000481492 SPATA31A5Q5VU36 1347 aa28.83■■■□□ 2.21
PTPN18-211ENST00000481492 SPATA31A7Q8IWB4 1347 aa28.83■■■□□ 2.21
PTPN18-211ENST00000481492 SEPT12Q8IYM1 358 aa28.82■■■□□ 2.2
PTPN18-211ENST00000481492 USP31Q70CQ4 1352 aa28.81■■■□□ 2.2
PTPN18-211ENST00000481492 STRN4Q9NRL3 753 aa28.81■■■□□ 2.2
PTPN18-211ENST00000481492 EDC4Q6P2E9 1401 aaKnown RBP28.81■■■□□ 2.2
PTPN18-211ENST00000481492 LMO7Q8WWI1 1683 aa28.81■■■□□ 2.2
PTPN18-211ENST00000481492 NINLQ9Y2I6 1382 aa28.8■■■□□ 2.2
PTPN18-211ENST00000481492 SOX12O15370 315 aa28.78■■■□□ 2.2
PTPN18-211ENST00000481492 HSPA5P11021 654 aaKnown RBP28.78■■■□□ 2.2
PTPN18-211ENST00000481492 FAM98CQ17RN3 349 aaKnown RBP28.78■■■□□ 2.2
PTPN18-211ENST00000481492 ARHGEF25Q86VW2 580 aa28.78■■■□□ 2.2
PTPN18-211ENST00000481492 AXIN2Q9Y2T1 843 aa28.77■■■□□ 2.2
PTPN18-211ENST00000481492 AATKQ6ZMQ8 1374 aa28.77■■■□□ 2.2
PTPN18-211ENST00000481492 SPATA31A1Q5TZJ5 1347 aa28.77■■■□□ 2.2
PTPN18-211ENST00000481492 ZBTB7CA1YPR0 619 aa28.76■■■□□ 2.2
PTPN18-211ENST00000481492 LARP1Q6PKG0 1096 aaKnown RBP28.76■■■□□ 2.2
PTPN18-211ENST00000481492 EIF4G2P78344 907 aaKnown RBP eCLIP28.75■■■□□ 2.19
PTPN18-211ENST00000481492 KCNH5Q8NCM2 988 aa28.75■■■□□ 2.19
PTPN18-211ENST00000481492 EP400Q96L91 3159 aa28.75■■■□□ 2.19
PTPN18-211ENST00000481492 NFAT5O94916 1531 aa28.75■■■□□ 2.19
PTPN18-211ENST00000481492 EVA1CP58658 441 aa28.75■■■□□ 2.19
PTPN18-211ENST00000481492 ANKRD36BQ8N2N9 1353 aa28.74■■■□□ 2.19
PTPN18-211ENST00000481492 CDCA8Q53HL2 280 aa28.74■■■□□ 2.19
PTPN18-211ENST00000481492 COL18A1P39060 1754 aa28.73■■■□□ 2.19
PTPN18-211ENST00000481492 BRWD3Q6RI45 1802 aa28.72■■■□□ 2.19
PTPN18-211ENST00000481492 COL5A2P05997 1499 aaPredicted RBP28.71■■■□□ 2.19
PTPN18-211ENST00000481492 USP54Q70EL1 1684 aa28.71■■■□□ 2.19
PTPN18-211ENST00000481492 OVOS2A0A0J9YW53 1432 aa28.7■■■□□ 2.18
PTPN18-211ENST00000481492 OVOS2Q6IE36 1432 aa28.7■■■□□ 2.18
PTPN18-211ENST00000481492 CARD14Q9BXL6 1004 aa28.69■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms