RNA–Protein interactions for RNA: ENST00000481242.5

GARNL3-216, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 4,816 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-216ENST00000481242 DENND4BO75064 1496 aaPredicted RBP11.47□□□□□ -0.57
GARNL3-216ENST00000481242 TWISTNBQ3B726 338 aaPredicted RBP11.47□□□□□ -0.57
GARNL3-216ENST00000481242 HDGFL1Q5TGJ6 251 aa11.47□□□□□ -0.57
GARNL3-216ENST00000481242 CCT4P50991 539 aaKnown RBP11.47□□□□□ -0.57
GARNL3-216ENST00000481242 PDE3AQ14432 1141 aa11.47□□□□□ -0.57
GARNL3-216ENST00000481242 SART3Q15020 963 aaKnown RBP11.47□□□□□ -0.57
GARNL3-216ENST00000481242 ANKRD20A12PQ8NF67 263 aa11.47□□□□□ -0.57
GARNL3-216ENST00000481242 FBXW7Q969H0 707 aa11.47□□□□□ -0.57
GARNL3-216ENST00000481242 FCHSD2O94868 740 aa11.47□□□□□ -0.57
GARNL3-216ENST00000481242 XBP1P17861 261 aa11.46□□□□□ -0.57
GARNL3-216ENST00000481242 GSE1Q14687 1217 aa11.46□□□□□ -0.57
GARNL3-216ENST00000481242 NFXL1Q6ZNB6 911 aa11.46□□□□□ -0.57
GARNL3-216ENST00000481242 PSMA5P28066 241 aa11.46□□□□□ -0.57
GARNL3-216ENST00000481242 CNTROBQ8N137 903 aa11.46□□□□□ -0.57
GARNL3-216ENST00000481242 KIF14Q15058 1648 aa11.46□□□□□ -0.57
GARNL3-216ENST00000481242 SLC3A2P08195 630 aaKnown RBP11.46□□□□□ -0.58
GARNL3-216ENST00000481242 NOC3LQ8WTT2 800 aaKnown RBP11.46□□□□□ -0.58
GARNL3-216ENST00000481242 BECN2A8MW95 431 aa11.46□□□□□ -0.58
GARNL3-216ENST00000481242 GOLGA6L19H0YKK7 550 aa11.46□□□□□ -0.58
GARNL3-216ENST00000481242 PDE4CQ08493 712 aa11.46□□□□□ -0.58
GARNL3-216ENST00000481242 WASHC4Q2M389 1173 aa11.46□□□□□ -0.58
GARNL3-216ENST00000481242 NUDT16Q96DE0 195 aaKnown RBP11.46□□□□□ -0.58
GARNL3-216ENST00000481242 PEG3Q9GZU2 1588 aa11.46□□□□□ -0.58
GARNL3-216ENST00000481242 CWC22Q9HCG8 908 aaKnown RBP11.46□□□□□ -0.58
GARNL3-216ENST00000481242 MCTP1Q6DN14 999 aa11.45□□□□□ -0.58
GARNL3-216ENST00000481242 ARHGEF11O15085 1522 aa11.45□□□□□ -0.58
GARNL3-216ENST00000481242 RAD21O60216 631 aa11.44□□□□□ -0.58
GARNL3-216ENST00000481242 GNAI2P04899 355 aa11.44□□□□□ -0.58
GARNL3-216ENST00000481242 LRPPRCP42704 1394 aaKnown RBP11.44□□□□□ -0.58
GARNL3-216ENST00000481242 CDC45O75419 566 aa11.44□□□□□ -0.58
GARNL3-216ENST00000481242 SURF6O75683 361 aaKnown RBP11.44□□□□□ -0.58
GARNL3-216ENST00000481242 FAM43AQ8N2R8 423 aa11.44□□□□□ -0.58
GARNL3-216ENST00000481242 GCC1Q96CN9 775 aa11.44□□□□□ -0.58
GARNL3-216ENST00000481242 BRMS1Q9HCU9 246 aa11.44□□□□□ -0.58
GARNL3-216ENST00000481242 NUCB2P80303 420 aa11.44□□□□□ -0.58
GARNL3-216ENST00000481242 GZF1Q9H116 711 aaPredicted RBP11.44□□□□□ -0.58
GARNL3-216ENST00000481242 CCDC43Q96MW1 224 aaKnown RBP11.44□□□□□ -0.58
GARNL3-216ENST00000481242 KLHL34Q8N239 644 aa11.43□□□□□ -0.58
GARNL3-216ENST00000481242 CDK13Q14004 1512 aaKnown RBP11.43□□□□□ -0.58
GARNL3-216ENST00000481242 DNAJC5BQ9UF47 199 aa11.43□□□□□ -0.58
GARNL3-216ENST00000481242 DDX49Q9Y6V7 483 aaKnown RBP11.43□□□□□ -0.58
GARNL3-216ENST00000481242 A0A0U1RQG5 324 aaPredicted RBP11.43□□□□□ -0.58
GARNL3-216ENST00000481242 SRCIN1Q9C0H9 1055 aa11.43□□□□□ -0.58
GARNL3-216ENST00000481242 CCDC158Q5M9N0 1113 aa11.43□□□□□ -0.58
GARNL3-216ENST00000481242 SMC3Q9UQE7 1217 aa11.43□□□□□ -0.58
GARNL3-216ENST00000481242 NAIPQ13075 1403 aa11.42□□□□□ -0.58
GARNL3-216ENST00000481242 CCDC27Q2M243 656 aa11.42□□□□□ -0.58
GARNL3-216ENST00000481242 LNPKQ9C0E8 428 aa11.42□□□□□ -0.58
GARNL3-216ENST00000481242 EXOSC9Q06265 439 aaKnown RBP11.42□□□□□ -0.58
GARNL3-216ENST00000481242 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.42□□□□□ -0.58
GARNL3-216ENST00000481242 NUTM2BA6NNL0 878 aaPredicted RBP11.42□□□□□ -0.58
GARNL3-216ENST00000481242 NUTM2EB1AL46 878 aaPredicted RBP11.42□□□□□ -0.58
GARNL3-216ENST00000481242 IPO7O95373 1038 aaKnown RBP11.42□□□□□ -0.58
GARNL3-216ENST00000481242 CREBRFQ8IUR6 639 aa11.42□□□□□ -0.58
GARNL3-216ENST00000481242 NUTM2AQ8IVF1 878 aaPredicted RBP11.42□□□□□ -0.58
GARNL3-216ENST00000481242 FSD1Q9BTV5 496 aa11.42□□□□□ -0.58
GARNL3-216ENST00000481242 MCM2P49736 904 aa11.42□□□□□ -0.58
GARNL3-216ENST00000481242 AMOTQ4VCS5 1084 aa11.42□□□□□ -0.58
GARNL3-216ENST00000481242 DDX54Q8TDD1 881 aaKnown RBP11.42□□□□□ -0.58
GARNL3-216ENST00000481242 CAMSAP2Q08AD1 1489 aa11.41□□□□□ -0.58
GARNL3-216ENST00000481242 TEX14Q8IWB6 1497 aa11.41□□□□□ -0.58
GARNL3-216ENST00000481242 STARD3NLO95772 234 aa11.41□□□□□ -0.58
GARNL3-216ENST00000481242 CNNM1Q9NRU3 951 aa11.41□□□□□ -0.58
GARNL3-216ENST00000481242 FOXD4L1Q9NU39 408 aa11.41□□□□□ -0.58
GARNL3-216ENST00000481242 NCBP3Q53F19 620 aaKnown RBP11.41□□□□□ -0.58
GARNL3-216ENST00000481242 PES1O00541 588 aaKnown RBP11.41□□□□□ -0.58
GARNL3-216ENST00000481242 NBPF8Q3BBV2 869 aa11.41□□□□□ -0.58
GARNL3-216ENST00000481242 CHMP5Q9NZZ3 219 aa11.41□□□□□ -0.58
GARNL3-216ENST00000481242 SLC4A2P04920 1241 aa11.4□□□□□ -0.58
GARNL3-216ENST00000481242 ZSCAN25Q6NSZ9 544 aa11.4□□□□□ -0.58
GARNL3-216ENST00000481242 PHF8Q9UPP1 1060 aa11.4□□□□□ -0.58
GARNL3-216ENST00000481242 TNNT3P45378 269 aaPredicted RBP11.4□□□□□ -0.58
GARNL3-216ENST00000481242 DHX29Q7Z478 1369 aaKnown RBP11.4□□□□□ -0.59
GARNL3-216ENST00000481242 PDCP20941 246 aa11.39□□□□□ -0.59
GARNL3-216ENST00000481242 FANCAO15360 1455 aa11.39□□□□□ -0.59
GARNL3-216ENST00000481242 NACAP1Q9BZK3 213 aa11.39□□□□□ -0.59
GARNL3-216ENST00000481242 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.39□□□□□ -0.59
GARNL3-216ENST00000481242 URB2Q14146 1524 aaKnown RBP11.39□□□□□ -0.59
GARNL3-216ENST00000481242 CADPS2Q86UW7 1296 aa11.39□□□□□ -0.59
GARNL3-216ENST00000481242 MPHOSPH8Q99549 860 aa11.39□□□□□ -0.59
GARNL3-216ENST00000481242 ZNF652Q9Y2D9 606 aa11.39□□□□□ -0.59
GARNL3-216ENST00000481242 CCDC57Q2TAC2 916 aa11.38□□□□□ -0.59
GARNL3-216ENST00000481242 CCDC73Q6ZRK6 1079 aa11.38□□□□□ -0.59
GARNL3-216ENST00000481242 NFE2L2Q16236 605 aa11.38□□□□□ -0.59
GARNL3-216ENST00000481242 PANK1Q8TE04 598 aa11.38□□□□□ -0.59
GARNL3-216ENST00000481242 ABCC5O15440 1437 aa11.38□□□□□ -0.59
GARNL3-216ENST00000481242 GNAT3A8MTJ3 354 aa11.38□□□□□ -0.59
GARNL3-216ENST00000481242 AMOTL2Q9Y2J4 779 aa11.38□□□□□ -0.59
GARNL3-216ENST00000481242 ABCC11Q96J66 1382 aa11.37□□□□□ -0.59
GARNL3-216ENST00000481242 BICD2Q8TD16 824 aa11.37□□□□□ -0.59
GARNL3-216ENST00000481242 IDI1Q13907 227 aa11.37□□□□□ -0.59
GARNL3-216ENST00000481242 C22orf23Q9BZE7 217 aa11.37□□□□□ -0.59
GARNL3-216ENST00000481242 NCOA1Q15788 1441 aa11.37□□□□□ -0.59
GARNL3-216ENST00000481242 BTBD11A6QL63 1104 aa11.37□□□□□ -0.59
GARNL3-216ENST00000481242 PIP4K2BP78356 416 aa11.36□□□□□ -0.59
GARNL3-216ENST00000481242 GOLGA6L1Q8N7Z2 621 aa11.36□□□□□ -0.59
GARNL3-216ENST00000481242 CEP126Q9P2H0 1117 aa11.36□□□□□ -0.59
GARNL3-216ENST00000481242 WASLO00401 505 aaPredicted RBP11.36□□□□□ -0.59
GARNL3-216ENST00000481242 TTC39AQ5SRH9 613 aa11.36□□□□□ -0.59
GARNL3-216ENST00000481242 ATF7IPQ6VMQ6 1270 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms