RNA–Protein interactions for RNA: ENST00000481020.5

NR1H3-220, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 5

Gene NR1H3, Length 1,704 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-220ENST00000481020 GRPEL1Q9HAV7 217 aa17.99■□□□□ 0.47
NR1H3-220ENST00000481020 RRP9O43818 475 aaKnown RBP17.98■□□□□ 0.47
NR1H3-220ENST00000481020 ALDH1L2Q3SY69 923 aa17.98■□□□□ 0.47
NR1H3-220ENST00000481020 EVC2Q86UK5 1308 aa17.98■□□□□ 0.47
NR1H3-220ENST00000481020 NEUROD2Q15784 382 aa17.98■□□□□ 0.47
NR1H3-220ENST00000481020 RRP7AQ9Y3A4 280 aaKnown RBP17.98■□□□□ 0.47
NR1H3-220ENST00000481020 IBTKQ9P2D0 1353 aaPredicted RBP17.97■□□□□ 0.47
NR1H3-220ENST00000481020 MFAP1P55081 439 aaKnown RBP17.97■□□□□ 0.47
NR1H3-220ENST00000481020 SMC4Q9NTJ3 1288 aa17.97■□□□□ 0.47
NR1H3-220ENST00000481020 UGGT1Q9NYU2 1555 aa17.97■□□□□ 0.47
NR1H3-220ENST00000481020 CD109Q6YHK3 1445 aa17.96■□□□□ 0.47
NR1H3-220ENST00000481020 TRIM27P14373 513 aa17.96■□□□□ 0.47
NR1H3-220ENST00000481020 NUCB1Q02818 461 aa17.96■□□□□ 0.47
NR1H3-220ENST00000481020 BMP2KLQ5H9B9 411 aa17.96■□□□□ 0.47
NR1H3-220ENST00000481020 ZBTB40Q9NUA8 1239 aa17.96■□□□□ 0.47
NR1H3-220ENST00000481020 CLEC17AQ6ZS10 378 aa17.95■□□□□ 0.46
NR1H3-220ENST00000481020 SLC12A5Q9H2X9 1139 aa17.95■□□□□ 0.46
NR1H3-220ENST00000481020 U2AF1L5P0DN76 240 aaPredicted RBP17.95■□□□□ 0.46
NR1H3-220ENST00000481020 U2AF1Q01081 240 aaKnown RBP eCLIP17.95■□□□□ 0.46
NR1H3-220ENST00000481020 ARHGAP31Q2M1Z3 1444 aa17.94■□□□□ 0.46
NR1H3-220ENST00000481020 RAB3GAP1Q15042 981 aa17.94■□□□□ 0.46
NR1H3-220ENST00000481020 PLEKHF1Q96S99 279 aa17.94■□□□□ 0.46
NR1H3-220ENST00000481020 TNNQ9UQP3 1299 aa17.94■□□□□ 0.46
NR1H3-220ENST00000481020 PPIP5K1Q6PFW1 1433 aa17.94■□□□□ 0.46
NR1H3-220ENST00000481020 ESPNB1AK53 854 aa17.93■□□□□ 0.46
NR1H3-220ENST00000481020 BCL2L13Q9BXK5 485 aa17.93■□□□□ 0.46
NR1H3-220ENST00000481020 COL3A1P02461 1466 aaPredicted RBP17.93■□□□□ 0.46
NR1H3-220ENST00000481020 CFAP74Q9C0B2 1584 aa17.93■□□□□ 0.46
NR1H3-220ENST00000481020 HSP90AA1P07900 732 aaKnown RBP17.92■□□□□ 0.46
NR1H3-220ENST00000481020 GCC1Q96CN9 775 aa17.92■□□□□ 0.46
NR1H3-220ENST00000481020 TMPOP42166 694 aaKnown RBP17.92■□□□□ 0.46
NR1H3-220ENST00000481020 ITPRIPQ8IWB1 547 aa17.92■□□□□ 0.46
NR1H3-220ENST00000481020 SSH1Q8WYL5 1049 aa17.91■□□□□ 0.46
NR1H3-220ENST00000481020 TRIM44Q96DX7 344 aaPredicted RBP17.91■□□□□ 0.46
NR1H3-220ENST00000481020 NAP1L5Q96NT1 182 aaPredicted RBP17.91■□□□□ 0.46
NR1H3-220ENST00000481020 GLI2P10070 1586 aa17.91■□□□□ 0.46
NR1H3-220ENST00000481020 CDC42BPGQ6DT37 1551 aa17.9■□□□□ 0.46
NR1H3-220ENST00000481020 TULP4Q9NRJ4 1543 aa17.9■□□□□ 0.46
NR1H3-220ENST00000481020 GOLGA6L22H0YM25 854 aa17.9■□□□□ 0.46
NR1H3-220ENST00000481020 TPM2P07951 284 aa17.9■□□□□ 0.46
NR1H3-220ENST00000481020 EXOSC9Q06265 439 aaKnown RBP17.9■□□□□ 0.46
NR1H3-220ENST00000481020 ARHGAP45Q92619 1136 aa17.9■□□□□ 0.46
NR1H3-220ENST00000481020 ANKRD26Q9UPS8 1709 aa17.9■□□□□ 0.46
NR1H3-220ENST00000481020 ZFYVE9O95405 1425 aa17.9■□□□□ 0.46
NR1H3-220ENST00000481020 CHD1LQ86WJ1 897 aa17.89■□□□□ 0.46
NR1H3-220ENST00000481020 PANK2Q9BZ23 570 aa17.89■□□□□ 0.46
NR1H3-220ENST00000481020 TRAK1Q9UPV9 953 aa17.89■□□□□ 0.46
NR1H3-220ENST00000481020 PIK3R4Q99570 1358 aa17.89■□□□□ 0.45
NR1H3-220ENST00000481020 GZF1Q9H116 711 aaPredicted RBP17.89■□□□□ 0.45
NR1H3-220ENST00000481020 ARHGEF28Q8N1W1 1705 aaKnown RBP17.89■□□□□ 0.45
NR1H3-220ENST00000481020 KIDINS220Q9ULH0 1771 aa17.88■□□□□ 0.45
NR1H3-220ENST00000481020 HSP90AB1P08238 724 aaKnown RBP17.88■□□□□ 0.45
NR1H3-220ENST00000481020 CCDC173Q0VFZ6 552 aa17.88■□□□□ 0.45
NR1H3-220ENST00000481020 TNPO1Q92973 898 aaKnown RBP17.88■□□□□ 0.45
NR1H3-220ENST00000481020 TRIM35Q9UPQ4 493 aa17.88■□□□□ 0.45
NR1H3-220ENST00000481020 CALD1Q05682 793 aaKnown RBP17.87■□□□□ 0.45
NR1H3-220ENST00000481020 NOB1Q9ULX3 412 aaKnown RBP17.87■□□□□ 0.45
NR1H3-220ENST00000481020 NPATQ14207 1427 aa17.87■□□□□ 0.45
NR1H3-220ENST00000481020 PIK3C2BO00750 1634 aa17.87■□□□□ 0.45
NR1H3-220ENST00000481020 ATAD2Q6PL18 1390 aa17.87■□□□□ 0.45
NR1H3-220ENST00000481020 PNPLA6Q8IY17 1366 aa17.87■□□□□ 0.45
NR1H3-220ENST00000481020 VGFO15240 615 aaPredicted RBP17.86■□□□□ 0.45
NR1H3-220ENST00000481020 TNNT2P45379 298 aaPredicted RBP17.86■□□□□ 0.45
NR1H3-220ENST00000481020 TERF1P54274 439 aa17.86■□□□□ 0.45
NR1H3-220ENST00000481020 HECW2Q9P2P5 1572 aa17.86■□□□□ 0.45
NR1H3-220ENST00000481020 K7ELQ4 463 aaPredicted RBP17.86■□□□□ 0.45
NR1H3-220ENST00000481020 HSP90AA2PQ14568 343 aaPredicted RBP17.86■□□□□ 0.45
NR1H3-220ENST00000481020 TMEM57Q8N5G2 664 aa17.86■□□□□ 0.45
NR1H3-220ENST00000481020 PPP1R9BQ96SB3 815 aa17.86■□□□□ 0.45
NR1H3-220ENST00000481020 HS1BP3Q53T59 392 aa17.85■□□□□ 0.45
NR1H3-220ENST00000481020 ANP32BQ92688 251 aaKnown RBP17.85■□□□□ 0.45
NR1H3-220ENST00000481020 KIF24Q5T7B8 1368 aa17.85■□□□□ 0.45
NR1H3-220ENST00000481020 NEO1Q92859 1461 aa17.84■□□□□ 0.45
NR1H3-220ENST00000481020 SPRYD3Q8NCJ5 442 aa17.84■□□□□ 0.45
NR1H3-220ENST00000481020 PTCH1Q13635 1447 aa17.84■□□□□ 0.45
NR1H3-220ENST00000481020 TSR2Q969E8 191 aaKnown RBP17.84■□□□□ 0.45
NR1H3-220ENST00000481020 MLH3Q9UHC1 1453 aa17.83■□□□□ 0.45
NR1H3-220ENST00000481020 KLHL40Q2TBA0 621 aa17.83■□□□□ 0.44
NR1H3-220ENST00000481020 TERF2IPQ9NYB0 399 aa17.83■□□□□ 0.44
NR1H3-220ENST00000481020 DIP2BQ9P265 1576 aa17.82■□□□□ 0.44
NR1H3-220ENST00000481020 CLTCQ00610 1675 aaKnown RBP17.82■□□□□ 0.44
NR1H3-220ENST00000481020 FCHSD2O94868 740 aa17.82■□□□□ 0.44
NR1H3-220ENST00000481020 FRMPD1Q5SYB0 1578 aa17.81■□□□□ 0.44
NR1H3-220ENST00000481020 ABCC3O15438 1527 aa17.81■□□□□ 0.44
NR1H3-220ENST00000481020 A0A1W2PP64 1363 aa17.81■□□□□ 0.44
NR1H3-220ENST00000481020 FAM69CQ0P6D2 419 aa17.81■□□□□ 0.44
NR1H3-220ENST00000481020 KIF2CQ99661 725 aa17.81■□□□□ 0.44
NR1H3-220ENST00000481020 CAMSAP1Q5T5Y3 1602 aa17.8■□□□□ 0.44
NR1H3-220ENST00000481020 NEXMIFQ5QGS0 1516 aa17.8■□□□□ 0.44
NR1H3-220ENST00000481020 POGZQ7Z3K3 1410 aa17.8■□□□□ 0.44
NR1H3-220ENST00000481020 DIAPH1O60610 1272 aaKnown RBP17.79■□□□□ 0.44
NR1H3-220ENST00000481020 RIPK4P57078 832 aa17.79■□□□□ 0.44
NR1H3-220ENST00000481020 NUCB2P80303 420 aa17.79■□□□□ 0.44
NR1H3-220ENST00000481020 CDC45O75419 566 aa17.78■□□□□ 0.44
NR1H3-220ENST00000481020 RABEP1Q15276 862 aa17.78■□□□□ 0.44
NR1H3-220ENST00000481020 YEATS2Q9ULM3 1422 aa17.78■□□□□ 0.44
NR1H3-220ENST00000481020 U2SURPO15042 1029 aaKnown RBP17.78■□□□□ 0.44
NR1H3-220ENST00000481020 ZBTB7BO15156 539 aaPredicted RBP17.78■□□□□ 0.44
NR1H3-220ENST00000481020 ZNF445P59923 1031 aa17.78■□□□□ 0.44
NR1H3-220ENST00000481020 ZSCAN30Q86W11 494 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms