RNA–Protein interactions for RNA: ENST00000480624.5

MACF1-217, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 3

Gene MACF1, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-217ENST00000480624 GGNBP2Q9H3C7 697 aa15.35■□□□□ 0.05
MACF1-217ENST00000480624 TTC21BQ7Z4L5 1316 aa15.35■□□□□ 0.05
MACF1-217ENST00000480624 NRKQ7Z2Y5 1582 aa15.34■□□□□ 0.05
MACF1-217ENST00000480624 MORC1Q86VD1 984 aa15.34■□□□□ 0.05
MACF1-217ENST00000480624 NLRP13Q86W25 1043 aa15.33■□□□□ 0.04
MACF1-217ENST00000480624 NME9Q86XW9 330 aa15.33■□□□□ 0.04
MACF1-217ENST00000480624 BRD4O60885 1362 aaPredicted RBP15.33■□□□□ 0.04
MACF1-217ENST00000480624 SOCS7O14512 581 aa15.32■□□□□ 0.04
MACF1-217ENST00000480624 MRS2Q9HD23 443 aa15.32■□□□□ 0.04
MACF1-217ENST00000480624 ZRANB1Q9UGI0 708 aa15.32■□□□□ 0.04
MACF1-217ENST00000480624 CERKQ8TCT0 537 aa15.31■□□□□ 0.04
MACF1-217ENST00000480624 TTC21AQ8NDW8 1320 aa15.3■□□□□ 0.04
MACF1-217ENST00000480624 KIF20BQ96Q89 1820 aa15.3■□□□□ 0.04
MACF1-217ENST00000480624 FOXO3O43524 673 aa15.29■□□□□ 0.04
MACF1-217ENST00000480624 SLAIN2Q9P270 581 aa15.29■□□□□ 0.04
MACF1-217ENST00000480624 ANKRD26Q9UPS8 1709 aa15.29■□□□□ 0.04
MACF1-217ENST00000480624 KIF1AQ12756 1690 aa15.28■□□□□ 0.04
MACF1-217ENST00000480624 TNNT2P45379 298 aaPredicted RBP15.28■□□□□ 0.04
MACF1-217ENST00000480624 PSME1Q06323 249 aa15.28■□□□□ 0.04
MACF1-217ENST00000480624 ILDR2Q71H61 639 aa15.27■□□□□ 0.04
MACF1-217ENST00000480624 PNISRQ8TF01 805 aaKnown RBP15.27■□□□□ 0.04
MACF1-217ENST00000480624 USP31Q70CQ4 1352 aa15.26■□□□□ 0.03
MACF1-217ENST00000480624 SCAF1Q9H7N4 1312 aaKnown RBP15.26■□□□□ 0.03
MACF1-217ENST00000480624 BRINP3Q76B58 766 aa15.26■□□□□ 0.03
MACF1-217ENST00000480624 KRT28Q7Z3Y7 464 aa15.26■□□□□ 0.03
MACF1-217ENST00000480624 COG3Q96JB2 828 aa15.26■□□□□ 0.03
MACF1-217ENST00000480624 OVOS2A0A0J9YW53 1432 aa15.26■□□□□ 0.03
MACF1-217ENST00000480624 OVOS2Q6IE36 1432 aa15.26■□□□□ 0.03
MACF1-217ENST00000480624 XPCQ01831 940 aaPredicted RBP15.24■□□□□ 0.03
MACF1-217ENST00000480624 DDX17Q92841 729 aaKnown RBP15.24■□□□□ 0.03
MACF1-217ENST00000480624 PIK3C2AO00443 1686 aa15.24■□□□□ 0.03
MACF1-217ENST00000480624 PAK3O75914 559 aaPredicted RBP15.23■□□□□ 0.03
MACF1-217ENST00000480624 FBLN1P23142 703 aa15.23■□□□□ 0.03
MACF1-217ENST00000480624 MTHFSP49914 203 aa15.23■□□□□ 0.03
MACF1-217ENST00000480624 AATKQ6ZMQ8 1374 aa15.23■□□□□ 0.03
MACF1-217ENST00000480624 FAM9BQ8IZU0 186 aa15.22■□□□□ 0.03
MACF1-217ENST00000480624 ABTB2Q8N961 1025 aa15.22■□□□□ 0.03
MACF1-217ENST00000480624 POLKQ9UBT6 870 aa15.22■□□□□ 0.03
MACF1-217ENST00000480624 TRPM3Q9HCF6 1732 aaPredicted RBP15.22■□□□□ 0.03
MACF1-217ENST00000480624 NPHP3Q7Z494 1330 aa15.21■□□□□ 0.03
MACF1-217ENST00000480624 NLRP6P59044 892 aa15.21■□□□□ 0.03
MACF1-217ENST00000480624 NUTM2GQ5VZR2 741 aa15.21■□□□□ 0.03
MACF1-217ENST00000480624 YTHDC1Q96MU7 727 aaKnown RBP15.21■□□□□ 0.03
MACF1-217ENST00000480624 PXDNQ92626 1479 aa15.2■□□□□ 0.02
MACF1-217ENST00000480624 USP54Q70EL1 1684 aa15.2■□□□□ 0.02
MACF1-217ENST00000480624 SBNO1A3KN83 1393 aa15.2■□□□□ 0.02
MACF1-217ENST00000480624 MARF1Q9Y4F3 1742 aaKnown RBP15.2■□□□□ 0.02
MACF1-217ENST00000480624 SMG6Q86US8 1419 aaKnown RBP15.18■□□□□ 0.02
MACF1-217ENST00000480624 EMILIN1Q9Y6C2 1016 aa15.18■□□□□ 0.02
MACF1-217ENST00000480624 INSRP06213 1382 aa15.18■□□□□ 0.02
MACF1-217ENST00000480624 PNPLA6Q8IY17 1366 aa15.18■□□□□ 0.02
MACF1-217ENST00000480624 SOS2Q07890 1332 aaPredicted RBP15.17■□□□□ 0.02
MACF1-217ENST00000480624 COL3A1P02461 1466 aaPredicted RBP15.17■□□□□ 0.02
MACF1-217ENST00000480624 CFAP53Q96M91 514 aa15.17■□□□□ 0.02
MACF1-217ENST00000480624 SPATA31A3Q5VYP0 1347 aa15.17■□□□□ 0.02
MACF1-217ENST00000480624 ALS2Q96Q42 1657 aa15.16■□□□□ 0.02
MACF1-217ENST00000480624 RRS1Q15050 365 aaKnown RBP15.16■□□□□ 0.02
MACF1-217ENST00000480624 USP19O94966 1318 aa15.16■□□□□ 0.02
MACF1-217ENST00000480624 ADAMTS8Q9UP79 889 aa15.15■□□□□ 0.02
MACF1-217ENST00000480624 TNS3Q68CZ2 1445 aa15.15■□□□□ 0.02
MACF1-217ENST00000480624 LMOD2Q6P5Q4 547 aa15.14■□□□□ 0.01
MACF1-217ENST00000480624 MAP3K19Q56UN5 1328 aa15.14■□□□□ 0.01
MACF1-217ENST00000480624 IQSEC2Q5JU85 1478 aa15.14■□□□□ 0.01
MACF1-217ENST00000480624 NHSL1Q5SYE7 1610 aa15.14■□□□□ 0.01
MACF1-217ENST00000480624 SLIT3O75094 1523 aa15.13■□□□□ 0.01
MACF1-217ENST00000480624 SHPRHQ149N8 1683 aa15.13■□□□□ 0.01
MACF1-217ENST00000480624 MAP2P11137 1827 aaKnown RBP15.13■□□□□ 0.01
MACF1-217ENST00000480624 PPM1GO15355 546 aaPredicted RBP15.13■□□□□ 0.01
MACF1-217ENST00000480624 SOX12O15370 315 aa15.13■□□□□ 0.01
MACF1-217ENST00000480624 WDR43Q15061 677 aaKnown RBP eCLIP15.13■□□□□ 0.01
MACF1-217ENST00000480624 CDK12Q9NYV4 1490 aaPredicted RBP15.13■□□□□ 0.01
MACF1-217ENST00000480624 NFAT5O94916 1531 aa15.12■□□□□ 0.01
MACF1-217ENST00000480624 TOM1O60784 492 aa15.12■□□□□ 0.01
MACF1-217ENST00000480624 KCNH5Q8NCM2 988 aa15.12■□□□□ 0.01
MACF1-217ENST00000480624 ROBO1Q9Y6N7 1651 aa15.12■□□□□ 0.01
MACF1-217ENST00000480624 PEAK1Q9H792 1746 aa15.12■□□□□ 0.01
MACF1-217ENST00000480624 MED1Q15648 1581 aaPredicted RBP15.11■□□□□ 0.01
MACF1-217ENST00000480624 GCP02774 474 aa15.11■□□□□ 0.01
MACF1-217ENST00000480624 ARHGEF10O15013 1369 aa15.11■□□□□ 0.01
MACF1-217ENST00000480624 DIAPH1O60610 1272 aaKnown RBP15.1■□□□□ 0.01
MACF1-217ENST00000480624 IL13P35225 146 aa15.1■□□□□ 0.01
MACF1-217ENST00000480624 AHDC1Q5TGY3 1603 aaPredicted RBP15.1■□□□□ 0.01
MACF1-217ENST00000480624 BLMP54132 1417 aaPredicted RBP15.09■□□□□ 0.01
MACF1-217ENST00000480624 UBAP1LF5GYI3 381 aa15.09■□□□□ 0.01
MACF1-217ENST00000480624 HNRNPUQ00839 825 aaKnown RBP eCLIP15.09■□□□□ 0.01
MACF1-217ENST00000480624 KIF24Q5T7B8 1368 aa15.09■□□□□ 0.01
MACF1-217ENST00000480624 PLEKHG5O94827 1062 aa15.08■□□□□ 0
MACF1-217ENST00000480624 HSP90AB2PQ58FF8 381 aa15.08■□□□□ 0
MACF1-217ENST00000480624 ARHGEF25Q86VW2 580 aa15.08■□□□□ 0
MACF1-217ENST00000480624 NUDCQ9Y266 331 aa15.08■□□□□ 0
MACF1-217ENST00000480624 FLT4P35916 1363 aa15.08■□□□□ 0
MACF1-217ENST00000480624 HOXC9P31274 260 aa15.07■□□□□ 0
MACF1-217ENST00000480624 AMPHP49418 695 aa15.07■□□□□ 0
MACF1-217ENST00000480624 EIF4A2Q14240 407 aaKnown RBP15.07■□□□□ 0
MACF1-217ENST00000480624 CABLES1Q8TDN4 633 aa15.07■□□□□ 0
MACF1-217ENST00000480624 U2AF1L5P0DN76 240 aaPredicted RBP15.06■□□□□ 0
MACF1-217ENST00000480624 PIP4K2BP78356 416 aa15.06■□□□□ 0
MACF1-217ENST00000480624 U2AF1Q01081 240 aaKnown RBP eCLIP15.06■□□□□ 0
MACF1-217ENST00000480624 RTL1A6NKG5 1358 aa15.06■□□□□ 0
MACF1-217ENST00000480624 CRYBG1Q9Y4K1 1723 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms