RNA–Protein interactions for RNA: ENST00000480461.1

TRA2B-212, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 538 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-212ENST00000480461 EVC2Q86UK5 1308 aa17.18■□□□□ 0.34
TRA2B-212ENST00000480461 SRPK2P78362 688 aaKnown RBP17.17■□□□□ 0.34
TRA2B-212ENST00000480461 FMN2Q9NZ56 1722 aa17.16■□□□□ 0.34
TRA2B-212ENST00000480461 SF3B2Q13435 895 aaKnown RBP17.15■□□□□ 0.34
TRA2B-212ENST00000480461 PMFBP1Q8TBY8 1022 aa17.15■□□□□ 0.34
TRA2B-212ENST00000480461 PLCH1Q4KWH8 1693 aa17.14■□□□□ 0.33
TRA2B-212ENST00000480461 SEPT12Q8IYM1 358 aa17.14■□□□□ 0.33
TRA2B-212ENST00000480461 CCDC61Q9Y6R9 512 aa17.14■□□□□ 0.33
TRA2B-212ENST00000480461 KIF1AQ12756 1690 aa17.13■□□□□ 0.33
TRA2B-212ENST00000480461 ANKARQ7Z5J8 1434 aa17.13■□□□□ 0.33
TRA2B-212ENST00000480461 ATP7BP35670 1465 aa17.13■□□□□ 0.33
TRA2B-212ENST00000480461 TMF1P82094 1093 aa17.13■□□□□ 0.33
TRA2B-212ENST00000480461 CABP1Q9NZU7 370 aa17.13■□□□□ 0.33
TRA2B-212ENST00000480461 PHF8Q9UPP1 1060 aa17.13■□□□□ 0.33
TRA2B-212ENST00000480461 SPATA31A3Q5VYP0 1347 aa17.13■□□□□ 0.33
TRA2B-212ENST00000480461 NWD2Q9ULI1 1742 aa17.13■□□□□ 0.33
TRA2B-212ENST00000480461 PLEKHG3A1L390 1219 aa17.12■□□□□ 0.33
TRA2B-212ENST00000480461 PUS7Q96PZ0 661 aaKnown RBP17.12■□□□□ 0.33
TRA2B-212ENST00000480461 RGPD8O14715 1765 aaPredicted RBP17.12■□□□□ 0.33
TRA2B-212ENST00000480461 ABCA3Q99758 1704 aa17.11■□□□□ 0.33
TRA2B-212ENST00000480461 SLC12A5Q9H2X9 1139 aa17.11■□□□□ 0.33
TRA2B-212ENST00000480461 PSDA5PKW4 1024 aaPredicted RBP17.1■□□□□ 0.33
TRA2B-212ENST00000480461 SLC24A1O60721 1099 aa17.1■□□□□ 0.33
TRA2B-212ENST00000480461 VPS72Q15906 364 aa17.1■□□□□ 0.33
TRA2B-212ENST00000480461 TNS3Q68CZ2 1445 aa17.08■□□□□ 0.32
TRA2B-212ENST00000480461 ACEP12821 1306 aa17.08■□□□□ 0.32
TRA2B-212ENST00000480461 ONECUT3O60422 494 aaPredicted RBP17.08■□□□□ 0.32
TRA2B-212ENST00000480461 KRT27Q7Z3Y8 459 aa17.08■□□□□ 0.32
TRA2B-212ENST00000480461 PPIP5K1Q6PFW1 1433 aa17.07■□□□□ 0.32
TRA2B-212ENST00000480461 BAG6P46379 1132 aa17.06■□□□□ 0.32
TRA2B-212ENST00000480461 KRT28Q7Z3Y7 464 aa17.06■□□□□ 0.32
TRA2B-212ENST00000480461 POLR3AO14802 1390 aaPredicted RBP17.05■□□□□ 0.32
TRA2B-212ENST00000480461 NRAPQ86VF7 1730 aa17.05■□□□□ 0.32
TRA2B-212ENST00000480461 KIF7Q2M1P5 1343 aa17.05■□□□□ 0.32
TRA2B-212ENST00000480461 NGDNQ8NEJ9 315 aaKnown RBP17.05■□□□□ 0.32
TRA2B-212ENST00000480461 TMC1Q8TDI8 760 aa17.05■□□□□ 0.32
TRA2B-212ENST00000480461 RGPD1P0DJD0 1748 aa17.04■□□□□ 0.32
TRA2B-212ENST00000480461 PSME1Q06323 249 aa17.04■□□□□ 0.32
TRA2B-212ENST00000480461 WASHC2AQ641Q2 1341 aa17.03■□□□□ 0.32
TRA2B-212ENST00000480461 HAP1P54257 671 aaPredicted RBP17.03■□□□□ 0.32
TRA2B-212ENST00000480461 CDCA8Q53HL2 280 aa17.03■□□□□ 0.32
TRA2B-212ENST00000480461 CABLES1Q8TDN4 633 aa17.03■□□□□ 0.32
TRA2B-212ENST00000480461 POLR3GLQ9BT43 218 aa17.03■□□□□ 0.32
TRA2B-212ENST00000480461 CCDC9Q9Y3X0 531 aaKnown RBP17.03■□□□□ 0.32
TRA2B-212ENST00000480461 CD163L1Q9NR16 1453 aa17.03■□□□□ 0.32
TRA2B-212ENST00000480461 TOPAZ1Q8N9V7 1692 aa17.02■□□□□ 0.32
TRA2B-212ENST00000480461 CPSF1Q10570 1443 aaKnown RBP17.02■□□□□ 0.31
TRA2B-212ENST00000480461 TNS1Q9HBL0 1735 aaKnown RBP17.01■□□□□ 0.31
TRA2B-212ENST00000480461 DISP2A7MBM2 1401 aa17■□□□□ 0.31
TRA2B-212ENST00000480461 CARD14Q9BXL6 1004 aa17■□□□□ 0.31
TRA2B-212ENST00000480461 SBNO1A3KN83 1393 aa17■□□□□ 0.31
TRA2B-212ENST00000480461 SSH2Q76I76 1423 aa16.99■□□□□ 0.31
TRA2B-212ENST00000480461 A0A0G2JS52 829 aa16.99■□□□□ 0.31
TRA2B-212ENST00000480461 MYT1Q01538 1121 aa16.99■□□□□ 0.31
TRA2B-212ENST00000480461 EN1Q05925 392 aaPredicted RBP16.99■□□□□ 0.31
TRA2B-212ENST00000480461 ZNF692Q9BU19 519 aaPredicted RBP16.99■□□□□ 0.31
TRA2B-212ENST00000480461 ARHGEF10O15013 1369 aa16.99■□□□□ 0.31
TRA2B-212ENST00000480461 CCDC7Q96M83 1385 aa16.99■□□□□ 0.31
TRA2B-212ENST00000480461 PLEKHG5O94827 1062 aa16.98■□□□□ 0.31
TRA2B-212ENST00000480461 R3HDM1Q15032 1099 aaKnown RBP16.98■□□□□ 0.31
TRA2B-212ENST00000480461 FAM98CQ17RN3 349 aaKnown RBP16.98■□□□□ 0.31
TRA2B-212ENST00000480461 FAM83GA6ND36 823 aa16.97■□□□□ 0.31
TRA2B-212ENST00000480461 A0A1W2PP64 1363 aa16.97■□□□□ 0.31
TRA2B-212ENST00000480461 THSD7AQ9UPZ6 1657 aa16.97■□□□□ 0.31
TRA2B-212ENST00000480461 PANK3Q9H999 370 aa16.96■□□□□ 0.31
TRA2B-212ENST00000480461 TERF2IPQ9NYB0 399 aa16.96■□□□□ 0.31
TRA2B-212ENST00000480461 USP6P35125 1406 aa16.96■□□□□ 0.3
TRA2B-212ENST00000480461 COL14A1Q05707 1796 aaKnown RBP16.95■□□□□ 0.3
TRA2B-212ENST00000480461 KTN1Q86UP2 1357 aaKnown RBP16.95■□□□□ 0.3
TRA2B-212ENST00000480461 PAK3O75914 559 aaPredicted RBP16.95■□□□□ 0.3
TRA2B-212ENST00000480461 ITSN1Q15811 1721 aa16.95■□□□□ 0.3
TRA2B-212ENST00000480461 TTC21BQ7Z4L5 1316 aa16.95■□□□□ 0.3
TRA2B-212ENST00000480461 NINLQ9Y2I6 1382 aa16.94■□□□□ 0.3
TRA2B-212ENST00000480461 TRPM3Q9HCF6 1732 aaPredicted RBP16.94■□□□□ 0.3
TRA2B-212ENST00000480461 FAM182BQ5T319 152 aa16.94■□□□□ 0.3
TRA2B-212ENST00000480461 NUTM2GQ5VZR2 741 aa16.94■□□□□ 0.3
TRA2B-212ENST00000480461 HDGFL2Q7Z4V5 671 aaPredicted RBP16.94■□□□□ 0.3
TRA2B-212ENST00000480461 ANKRD36BQ8N2N9 1353 aa16.93■□□□□ 0.3
TRA2B-212ENST00000480461 LMOD2Q6P5Q4 547 aa16.93■□□□□ 0.3
TRA2B-212ENST00000480461 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.93■□□□□ 0.3
TRA2B-212ENST00000480461 BTG4Q9NY30 223 aa16.93■□□□□ 0.3
TRA2B-212ENST00000480461 MYOM1P52179 1685 aa16.92■□□□□ 0.3
TRA2B-212ENST00000480461 ALS2Q96Q42 1657 aa16.92■□□□□ 0.3
TRA2B-212ENST00000480461 CRYBG1Q9Y4K1 1723 aa16.91■□□□□ 0.3
TRA2B-212ENST00000480461 EZH2Q15910 746 aaKnown RBP16.91■□□□□ 0.3
TRA2B-212ENST00000480461 NME9Q86XW9 330 aa16.91■□□□□ 0.3
TRA2B-212ENST00000480461 ABTB2Q8N961 1025 aa16.91■□□□□ 0.3
TRA2B-212ENST00000480461 PER1O15534 1290 aaPredicted RBP16.9■□□□□ 0.3
TRA2B-212ENST00000480461 SPATA31A5Q5VU36 1347 aa16.9■□□□□ 0.3
TRA2B-212ENST00000480461 SPATA31A7Q8IWB4 1347 aa16.9■□□□□ 0.3
TRA2B-212ENST00000480461 RREB1Q92766 1687 aa16.89■□□□□ 0.29
TRA2B-212ENST00000480461 FYB1O15117 783 aa16.89■□□□□ 0.29
TRA2B-212ENST00000480461 YY1P25490 414 aa16.89■□□□□ 0.29
TRA2B-212ENST00000480461 AKAP12Q02952 1782 aa16.89■□□□□ 0.29
TRA2B-212ENST00000480461 BRD4O60885 1362 aaPredicted RBP16.89■□□□□ 0.29
TRA2B-212ENST00000480461 ZNF316A6NFI3 1004 aaPredicted RBP16.88■□□□□ 0.29
TRA2B-212ENST00000480461 EDC4Q6P2E9 1401 aaKnown RBP16.87■□□□□ 0.29
TRA2B-212ENST00000480461 NLRP6P59044 892 aa16.87■□□□□ 0.29
TRA2B-212ENST00000480461 CAMKK2Q96RR4 588 aa16.87■□□□□ 0.29
TRA2B-212ENST00000480461 TTC21AQ8NDW8 1320 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms