RNA–Protein interactions for RNA: ENST00000480222.1

SIK3-209, Transcript of SIK family kinase 3, humanhuman

TSL 3

Gene SIK3, Length 665 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-209ENST00000480222 PHF8Q9UPP1 1060 aa17.11■□□□□ 0.33
SIK3-209ENST00000480222 CC2D1BQ5T0F9 858 aaKnown RBP17.1■□□□□ 0.33
SIK3-209ENST00000480222 NGDNQ8NEJ9 315 aaKnown RBP17.1■□□□□ 0.33
SIK3-209ENST00000480222 TTC21AQ8NDW8 1320 aa17.1■□□□□ 0.33
SIK3-209ENST00000480222 PIK3C2AO00443 1686 aa17.08■□□□□ 0.32
SIK3-209ENST00000480222 ESCO1Q5FWF5 840 aa17.08■□□□□ 0.32
SIK3-209ENST00000480222 PMFBP1Q8TBY8 1022 aa17.08■□□□□ 0.32
SIK3-209ENST00000480222 TRPM3Q9HCF6 1732 aaPredicted RBP17.07■□□□□ 0.32
SIK3-209ENST00000480222 OVOS2A0A0J9YW53 1432 aa17.06■□□□□ 0.32
SIK3-209ENST00000480222 OVOS2Q6IE36 1432 aa17.06■□□□□ 0.32
SIK3-209ENST00000480222 TTC21BQ7Z4L5 1316 aa17.06■□□□□ 0.32
SIK3-209ENST00000480222 SCAF1Q9H7N4 1312 aaKnown RBP17.06■□□□□ 0.32
SIK3-209ENST00000480222 NLRP13Q86W25 1043 aa17.06■□□□□ 0.32
SIK3-209ENST00000480222 HSPA1LP34931 641 aa17.05■□□□□ 0.32
SIK3-209ENST00000480222 NHSL1Q5SYE7 1610 aa17.04■□□□□ 0.32
SIK3-209ENST00000480222 MED1Q15648 1581 aaPredicted RBP17.04■□□□□ 0.32
SIK3-209ENST00000480222 FYB1O15117 783 aa17.04■□□□□ 0.32
SIK3-209ENST00000480222 PIP4K2BP78356 416 aa17.04■□□□□ 0.32
SIK3-209ENST00000480222 MORC1Q86VD1 984 aa17.04■□□□□ 0.32
SIK3-209ENST00000480222 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.04■□□□□ 0.322e-6■□□□□ 10.8
SIK3-209ENST00000480222 USP31Q70CQ4 1352 aa17.03■□□□□ 0.32
SIK3-209ENST00000480222 TOM1O60784 492 aa17.03■□□□□ 0.32
SIK3-209ENST00000480222 CNGB1Q14028 1251 aaPredicted RBP17.03■□□□□ 0.32
SIK3-209ENST00000480222 ORAI2Q96SN7 254 aa17.03■□□□□ 0.32
SIK3-209ENST00000480222 MARF1Q9Y4F3 1742 aaKnown RBP17.03■□□□□ 0.32
SIK3-209ENST00000480222 NPHP3Q7Z494 1330 aa17.02■□□□□ 0.32
SIK3-209ENST00000480222 ALS2Q96Q42 1657 aa17.02■□□□□ 0.32
SIK3-209ENST00000480222 PXDNQ92626 1479 aa17.01■□□□□ 0.31
SIK3-209ENST00000480222 PPP2R1AP30153 589 aa17.01■□□□□ 0.31
SIK3-209ENST00000480222 GGNBP2Q9H3C7 697 aa17.01■□□□□ 0.31
SIK3-209ENST00000480222 SLAIN2Q9P270 581 aa17.01■□□□□ 0.31
SIK3-209ENST00000480222 PSME1Q06323 249 aa17■□□□□ 0.31
SIK3-209ENST00000480222 SMG6Q86US8 1419 aaKnown RBP17■□□□□ 0.31
SIK3-209ENST00000480222 NME9Q86XW9 330 aa17■□□□□ 0.31
SIK3-209ENST00000480222 COG3Q96JB2 828 aa17■□□□□ 0.31
SIK3-209ENST00000480222 MRS2Q9HD23 443 aa17■□□□□ 0.31
SIK3-209ENST00000480222 AATKQ6ZMQ8 1374 aa17■□□□□ 0.31
SIK3-209ENST00000480222 BRINP3Q76B58 766 aa16.99■□□□□ 0.31
SIK3-209ENST00000480222 ROBO1Q9Y6N7 1651 aa16.99■□□□□ 0.31
SIK3-209ENST00000480222 SBNO1A3KN83 1393 aa16.99■□□□□ 0.31
SIK3-209ENST00000480222 AHDC1Q5TGY3 1603 aaPredicted RBP16.98■□□□□ 0.31
SIK3-209ENST00000480222 TNS3Q68CZ2 1445 aa16.97■□□□□ 0.31
SIK3-209ENST00000480222 FOXO3O43524 673 aa16.97■□□□□ 0.31
SIK3-209ENST00000480222 SLIT3O75094 1523 aa16.96■□□□□ 0.31
SIK3-209ENST00000480222 CDK12Q9NYV4 1490 aaPredicted RBP16.96■□□□□ 0.31
SIK3-209ENST00000480222 KRT28Q7Z3Y7 464 aa16.95■□□□□ 0.3
SIK3-209ENST00000480222 PAK3O75914 559 aaPredicted RBP16.94■□□□□ 0.3
SIK3-209ENST00000480222 MAP2P11137 1827 aaKnown RBP16.93■□□□□ 0.3
SIK3-209ENST00000480222 CRYBG1Q9Y4K1 1723 aa16.93■□□□□ 0.3
SIK3-209ENST00000480222 ARHGEF10O15013 1369 aa16.93■□□□□ 0.3
SIK3-209ENST00000480222 PHRF1Q9P1Y6 1649 aaKnown RBP16.93■□□□□ 0.3
SIK3-209ENST00000480222 ABTB2Q8N961 1025 aa16.93■□□□□ 0.3
SIK3-209ENST00000480222 SHPRHQ149N8 1683 aa16.93■□□□□ 0.3
SIK3-209ENST00000480222 SOS2Q07890 1332 aaPredicted RBP16.93■□□□□ 0.3
SIK3-209ENST00000480222 INSRP06213 1382 aa16.92■□□□□ 0.3
SIK3-209ENST00000480222 NFAT5O94916 1531 aa16.92■□□□□ 0.3
SIK3-209ENST00000480222 TNNT2P45379 298 aaPredicted RBP16.92■□□□□ 0.3
SIK3-209ENST00000480222 CCDC184Q52MB2 194 aa16.92■□□□□ 0.3
SIK3-209ENST00000480222 COL3A1P02461 1466 aaPredicted RBP16.92■□□□□ 0.3
SIK3-209ENST00000480222 KIF24Q5T7B8 1368 aa16.91■□□□□ 0.3
SIK3-209ENST00000480222 NLRP6P59044 892 aa16.91■□□□□ 0.3
SIK3-209ENST00000480222 CFAP53Q96M91 514 aa16.91■□□□□ 0.3
SIK3-209ENST00000480222 ZRANB1Q9UGI0 708 aa16.91■□□□□ 0.3
SIK3-209ENST00000480222 USP19O94966 1318 aa16.91■□□□□ 0.3
SIK3-209ENST00000480222 PNPLA6Q8IY17 1366 aa16.9■□□□□ 0.3
SIK3-209ENST00000480222 XPCQ01831 940 aaPredicted RBP16.9■□□□□ 0.3
SIK3-209ENST00000480222 LTN1O94822 1766 aa16.89■□□□□ 0.3
SIK3-209ENST00000480222 MTHFSP49914 203 aa16.89■□□□□ 0.29
SIK3-209ENST00000480222 ABCA3Q99758 1704 aa16.89■□□□□ 0.29
SIK3-209ENST00000480222 SPATA31A3Q5VYP0 1347 aa16.89■□□□□ 0.29
SIK3-209ENST00000480222 RTL1A6NKG5 1358 aa16.89■□□□□ 0.29
SIK3-209ENST00000480222 PEAK1Q9H792 1746 aa16.88■□□□□ 0.29
SIK3-209ENST00000480222 KCNH5Q8NCM2 988 aa16.88■□□□□ 0.29
SIK3-209ENST00000480222 PNISRQ8TF01 805 aaKnown RBP16.88■□□□□ 0.29
SIK3-209ENST00000480222 PHLPP1O60346 1717 aa16.87■□□□□ 0.29
SIK3-209ENST00000480222 ABCC6O95255 1503 aa16.87■□□□□ 0.29
SIK3-209ENST00000480222 PHF23Q9BUL5 403 aaPredicted RBP16.87■□□□□ 0.29
SIK3-209ENST00000480222 POLKQ9UBT6 870 aa16.87■□□□□ 0.29
SIK3-209ENST00000480222 COL16A1Q07092 1604 aaPredicted RBP16.87■□□□□ 0.29
SIK3-209ENST00000480222 COL22A1Q8NFW1 1626 aaPredicted RBP16.86■□□□□ 0.29
SIK3-209ENST00000480222 DDX17Q92841 729 aaKnown RBP16.85■□□□□ 0.29
SIK3-209ENST00000480222 FLT4P35916 1363 aa16.85■□□□□ 0.29
SIK3-209ENST00000480222 BLMP54132 1417 aaPredicted RBP16.85■□□□□ 0.29
SIK3-209ENST00000480222 WDR43Q15061 677 aaKnown RBP eCLIP16.84■□□□□ 0.29
SIK3-209ENST00000480222 MAP3K19Q56UN5 1328 aa16.83■□□□□ 0.28
SIK3-209ENST00000480222 NUTM2GQ5VZR2 741 aa16.83■□□□□ 0.28
SIK3-209ENST00000480222 LMOD2Q6P5Q4 547 aa16.83■□□□□ 0.28
SIK3-209ENST00000480222 EMILIN1Q9Y6C2 1016 aa16.83■□□□□ 0.28
SIK3-209ENST00000480222 RRS1Q15050 365 aaKnown RBP16.82■□□□□ 0.28
SIK3-209ENST00000480222 FAM9BQ8IZU0 186 aa16.82■□□□□ 0.28
SIK3-209ENST00000480222 NUDCQ9Y266 331 aa16.81■□□□□ 0.28
SIK3-209ENST00000480222 RGPD1P0DJD0 1748 aa16.81■□□□□ 0.28
SIK3-209ENST00000480222 GCP02774 474 aa16.8■□□□□ 0.28
SIK3-209ENST00000480222 CPDO75976 1380 aa16.79■□□□□ 0.28
SIK3-209ENST00000480222 PPM1GO15355 546 aaPredicted RBP16.79■□□□□ 0.28
SIK3-209ENST00000480222 SOX12O15370 315 aa16.79■□□□□ 0.28
SIK3-209ENST00000480222 DIAPH1O60610 1272 aaKnown RBP16.79■□□□□ 0.28
SIK3-209ENST00000480222 LRRC59Q96AG4 307 aaKnown RBP16.79■□□□□ 0.28
SIK3-209ENST00000480222 FBLN1P23142 703 aa16.78■□□□□ 0.28
SIK3-209ENST00000480222 AMPHP49418 695 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 411.7 ms