RNA–Protein interactions for RNA: ENST00000480219.1

SCAMP3-207, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 2

Gene SCAMP3, Length 752 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-207ENST00000480219 TRPM3Q9HCF6 1732 aaPredicted RBP22.99■■□□□ 1.27
SCAMP3-207ENST00000480219 FYB1O15117 783 aa22.99■■□□□ 1.27
SCAMP3-207ENST00000480219 NHSL1Q5SYE7 1610 aa22.97■■□□□ 1.27
SCAMP3-207ENST00000480219 USP31Q70CQ4 1352 aa22.97■■□□□ 1.27
SCAMP3-207ENST00000480219 PXDNQ92626 1479 aa22.97■■□□□ 1.27
SCAMP3-207ENST00000480219 MIER1Q8N108 512 aa22.96■■□□□ 1.27
SCAMP3-207ENST00000480219 NPHP3Q7Z494 1330 aa22.96■■□□□ 1.27
SCAMP3-207ENST00000480219 OVOS2A0A0J9YW53 1432 aa22.95■■□□□ 1.26
SCAMP3-207ENST00000480219 PIK3C2AO00443 1686 aa22.95■■□□□ 1.26
SCAMP3-207ENST00000480219 OVOS2Q6IE36 1432 aa22.95■■□□□ 1.26
SCAMP3-207ENST00000480219 SBNO1A3KN83 1393 aa22.94■■□□□ 1.26
SCAMP3-207ENST00000480219 FOXO3O43524 673 aa22.94■■□□□ 1.26
SCAMP3-207ENST00000480219 CERKQ8TCT0 537 aa22.94■■□□□ 1.26
SCAMP3-207ENST00000480219 CC2D1BQ5T0F9 858 aaKnown RBP22.93■■□□□ 1.26
SCAMP3-207ENST00000480219 SCAF1Q9H7N4 1312 aaKnown RBP22.92■■□□□ 1.26
SCAMP3-207ENST00000480219 PSME1Q06323 249 aa22.92■■□□□ 1.26
SCAMP3-207ENST00000480219 ALS2Q96Q42 1657 aa22.92■■□□□ 1.26
SCAMP3-207ENST00000480219 ROBO1Q9Y6N7 1651 aa22.92■■□□□ 1.26
SCAMP3-207ENST00000480219 AHDC1Q5TGY3 1603 aaPredicted RBP22.92■■□□□ 1.26
SCAMP3-207ENST00000480219 SOS2Q07890 1332 aaPredicted RBP22.91■■□□□ 1.26
SCAMP3-207ENST00000480219 CCER2I3L3R5 266 aa22.91■■□□□ 1.26
SCAMP3-207ENST00000480219 KRT28Q7Z3Y7 464 aa22.91■■□□□ 1.26
SCAMP3-207ENST00000480219 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.91■■□□□ 1.26
SCAMP3-207ENST00000480219 MYBBP1AQ9BQG0 1328 aaKnown RBP22.9■■□□□ 1.26
SCAMP3-207ENST00000480219 TOM1O60784 492 aa22.9■■□□□ 1.26
SCAMP3-207ENST00000480219 NME9Q86XW9 330 aa22.9■■□□□ 1.26
SCAMP3-207ENST00000480219 MARF1Q9Y4F3 1742 aaKnown RBP22.9■■□□□ 1.26
SCAMP3-207ENST00000480219 GGNBP2Q9H3C7 697 aa22.89■■□□□ 1.25
SCAMP3-207ENST00000480219 MORC1Q86VD1 984 aa22.87■■□□□ 1.25
SCAMP3-207ENST00000480219 AATKQ6ZMQ8 1374 aa22.87■■□□□ 1.25
SCAMP3-207ENST00000480219 TNS3Q68CZ2 1445 aa22.86■■□□□ 1.25
SCAMP3-207ENST00000480219 PPP2R1AP30153 589 aa22.84■■□□□ 1.25
SCAMP3-207ENST00000480219 NLRP13Q86W25 1043 aa22.84■■□□□ 1.25
SCAMP3-207ENST00000480219 COG3Q96JB2 828 aa22.84■■□□□ 1.25
SCAMP3-207ENST00000480219 MED1Q15648 1581 aaPredicted RBP22.84■■□□□ 1.25
SCAMP3-207ENST00000480219 SPATA31A3Q5VYP0 1347 aa22.83■■□□□ 1.25
SCAMP3-207ENST00000480219 SMG6Q86US8 1419 aaKnown RBP22.83■■□□□ 1.25
SCAMP3-207ENST00000480219 SLIT3O75094 1523 aa22.83■■□□□ 1.25
SCAMP3-207ENST00000480219 DDX17Q92841 729 aaKnown RBP22.83■■□□□ 1.25
SCAMP3-207ENST00000480219 ZRANB1Q9UGI0 708 aa22.83■■□□□ 1.25
SCAMP3-207ENST00000480219 USP19O94966 1318 aa22.82■■□□□ 1.24
SCAMP3-207ENST00000480219 ABTB2Q8N961 1025 aa22.82■■□□□ 1.24
SCAMP3-207ENST00000480219 ARHGEF10O15013 1369 aa22.81■■□□□ 1.24
SCAMP3-207ENST00000480219 XPCQ01831 940 aaPredicted RBP22.81■■□□□ 1.24
SCAMP3-207ENST00000480219 UBAP1LF5GYI3 381 aa22.8■■□□□ 1.24
SCAMP3-207ENST00000480219 PAK3O75914 559 aaPredicted RBP22.8■■□□□ 1.24
SCAMP3-207ENST00000480219 CRYBG1Q9Y4K1 1723 aa22.79■■□□□ 1.24
SCAMP3-207ENST00000480219 NLRP6P59044 892 aa22.79■■□□□ 1.24
SCAMP3-207ENST00000480219 NFAT5O94916 1531 aa22.78■■□□□ 1.24
SCAMP3-207ENST00000480219 COL16A1Q07092 1604 aaPredicted RBP22.78■■□□□ 1.24
SCAMP3-207ENST00000480219 CNGB1Q14028 1251 aaPredicted RBP22.77■■□□□ 1.24
SCAMP3-207ENST00000480219 INSRP06213 1382 aa22.76■■□□□ 1.23
SCAMP3-207ENST00000480219 PNPLA6Q8IY17 1366 aa22.76■■□□□ 1.23
SCAMP3-207ENST00000480219 PHRF1Q9P1Y6 1649 aaKnown RBP22.75■■□□□ 1.23
SCAMP3-207ENST00000480219 KIF24Q5T7B8 1368 aa22.75■■□□□ 1.23
SCAMP3-207ENST00000480219 COL22A1Q8NFW1 1626 aaPredicted RBP22.74■■□□□ 1.23
SCAMP3-207ENST00000480219 PHLPP1O60346 1717 aa22.74■■□□□ 1.23
SCAMP3-207ENST00000480219 CCDC184Q52MB2 194 aa22.73■■□□□ 1.23
SCAMP3-207ENST00000480219 KCNH5Q8NCM2 988 aa22.73■■□□□ 1.23
SCAMP3-207ENST00000480219 POLKQ9UBT6 870 aa22.73■■□□□ 1.23
SCAMP3-207ENST00000480219 CDK12Q9NYV4 1490 aaPredicted RBP22.73■■□□□ 1.23
SCAMP3-207ENST00000480219 LRRC59Q96AG4 307 aaKnown RBP22.72■■□□□ 1.23
SCAMP3-207ENST00000480219 MAP2P11137 1827 aaKnown RBP22.72■■□□□ 1.23
SCAMP3-207ENST00000480219 COL3A1P02461 1466 aaPredicted RBP22.72■■□□□ 1.23
SCAMP3-207ENST00000480219 MTHFSP49914 203 aa22.71■■□□□ 1.23
SCAMP3-207ENST00000480219 TNNT2P45379 298 aaPredicted RBP22.7■■□□□ 1.22
SCAMP3-207ENST00000480219 NUTM2GQ5VZR2 741 aa22.7■■□□□ 1.22
SCAMP3-207ENST00000480219 MRS2Q9HD23 443 aa22.7■■□□□ 1.22
SCAMP3-207ENST00000480219 ABCA3Q99758 1704 aa22.7■■□□□ 1.22
SCAMP3-207ENST00000480219 PIP4K2BP78356 416 aa22.69■■□□□ 1.22
SCAMP3-207ENST00000480219 PEAK1Q9H792 1746 aa22.68■■□□□ 1.22
SCAMP3-207ENST00000480219 RTL1A6NKG5 1358 aa22.68■■□□□ 1.22
SCAMP3-207ENST00000480219 GCP02774 474 aa22.68■■□□□ 1.22
SCAMP3-207ENST00000480219 ABCC6O95255 1503 aa22.67■■□□□ 1.22
SCAMP3-207ENST00000480219 PNISRQ8TF01 805 aaKnown RBP22.67■■□□□ 1.22
SCAMP3-207ENST00000480219 CPDO75976 1380 aa22.66■■□□□ 1.22
SCAMP3-207ENST00000480219 MAP3K19Q56UN5 1328 aa22.66■■□□□ 1.22
SCAMP3-207ENST00000480219 FBLN1P23142 703 aa22.66■■□□□ 1.22
SCAMP3-207ENST00000480219 EMILIN1Q9Y6C2 1016 aa22.66■■□□□ 1.22
SCAMP3-207ENST00000480219 SHPRHQ149N8 1683 aa22.65■■□□□ 1.22
SCAMP3-207ENST00000480219 LMOD2Q6P5Q4 547 aa22.65■■□□□ 1.22
SCAMP3-207ENST00000480219 ARHGEF25Q86VW2 580 aa22.65■■□□□ 1.22
SCAMP3-207ENST00000480219 FLT4P35916 1363 aa22.64■■□□□ 1.22
SCAMP3-207ENST00000480219 LTN1O94822 1766 aa22.64■■□□□ 1.22
SCAMP3-207ENST00000480219 RRS1Q15050 365 aaKnown RBP22.64■■□□□ 1.21
SCAMP3-207ENST00000480219 CFAP53Q96M91 514 aa22.63■■□□□ 1.21
SCAMP3-207ENST00000480219 COL18A1P39060 1754 aa22.6■■□□□ 1.21
SCAMP3-207ENST00000480219 IP6K1Q92551 441 aa22.59■■□□□ 1.21
SCAMP3-207ENST00000480219 HOXC9P31274 260 aa22.58■■□□□ 1.21
SCAMP3-207ENST00000480219 BLMP54132 1417 aaPredicted RBP22.57■■□□□ 1.2
SCAMP3-207ENST00000480219 CABLES1Q8TDN4 633 aa22.57■■□□□ 1.2
SCAMP3-207ENST00000480219 JCADQ9P266 1359 aa22.57■■□□□ 1.2
SCAMP3-207ENST00000480219 SOX12O15370 315 aa22.56■■□□□ 1.2
SCAMP3-207ENST00000480219 IL13P35225 146 aa22.56■■□□□ 1.2
SCAMP3-207ENST00000480219 RGPD1P0DJD0 1748 aa22.56■■□□□ 1.2
SCAMP3-207ENST00000480219 LMO7Q8WWI1 1683 aa22.55■■□□□ 1.2
SCAMP3-207ENST00000480219 DIAPH1O60610 1272 aaKnown RBP22.55■■□□□ 1.2
SCAMP3-207ENST00000480219 AMPHP49418 695 aa22.55■■□□□ 1.2
SCAMP3-207ENST00000480219 KIAA0232Q92628 1395 aa22.54■■□□□ 1.2
SCAMP3-207ENST00000480219 HSP90AB2PQ58FF8 381 aa22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms