RNA–Protein interactions for RNA: ENST00000480024.1

FN1-220, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-220ENST00000480024 VPS72Q15906 364 aa9.69□□□□□ -0.86
FN1-220ENST00000480024 A0A0G2JS52 829 aa9.68□□□□□ -0.86
FN1-220ENST00000480024 MYT1Q01538 1121 aa9.68□□□□□ -0.86
FN1-220ENST00000480024 NBPF1Q3BBV0 1214 aa9.68□□□□□ -0.86
FN1-220ENST00000480024 SEPT12Q8IYM1 358 aa9.68□□□□□ -0.86
FN1-220ENST00000480024 NUDT16Q96DE0 195 aaKnown RBP9.68□□□□□ -0.86
FN1-220ENST00000480024 CDK19Q9BWU1 502 aa9.67□□□□□ -0.86
FN1-220ENST00000480024 BTG4Q9NY30 223 aa9.67□□□□□ -0.86
FN1-220ENST00000480024 NRKQ7Z2Y5 1582 aa9.67□□□□□ -0.86
FN1-220ENST00000480024 BLMP54132 1417 aaPredicted RBP9.66□□□□□ -0.86
FN1-220ENST00000480024 PRDM11Q9NQV5 511 aa9.66□□□□□ -0.86
FN1-220ENST00000480024 TRPM1Q7Z4N2 1603 aa9.66□□□□□ -0.86
FN1-220ENST00000480024 SRCAPQ6ZRS2 3230 aa9.65□□□□□ -0.86
FN1-220ENST00000480024 POLR3AO14802 1390 aaPredicted RBP9.65□□□□□ -0.86
FN1-220ENST00000480024 ACEP12821 1306 aa9.65□□□□□ -0.86
FN1-220ENST00000480024 CENPJQ9HC77 1338 aaPredicted RBP9.65□□□□□ -0.86
FN1-220ENST00000480024 FAM98CQ17RN3 349 aaKnown RBP9.65□□□□□ -0.86
FN1-220ENST00000480024 NUTM2GQ5VZR2 741 aa9.65□□□□□ -0.86
FN1-220ENST00000480024 CCDC125Q86Z20 511 aa9.65□□□□□ -0.86
FN1-220ENST00000480024 PPIP5K1Q6PFW1 1433 aa9.65□□□□□ -0.87
FN1-220ENST00000480024 THSD7AQ9UPZ6 1657 aa9.64□□□□□ -0.87
FN1-220ENST00000480024 KIAA0232Q92628 1395 aa9.64□□□□□ -0.87
FN1-220ENST00000480024 SRPK2P78362 688 aaKnown RBP9.64□□□□□ -0.87
FN1-220ENST00000480024 CHRNA2Q15822 529 aa9.64□□□□□ -0.87
FN1-220ENST00000480024 KRT27Q7Z3Y8 459 aa9.64□□□□□ -0.87
FN1-220ENST00000480024 ONECUT3O60422 494 aaPredicted RBP9.63□□□□□ -0.87
FN1-220ENST00000480024 NBPF8Q3BBV2 869 aa9.63□□□□□ -0.87
FN1-220ENST00000480024 DEFB132Q7Z7B7 95 aa9.63□□□□□ -0.87
FN1-220ENST00000480024 L3MBTL2Q969R5 705 aa9.63□□□□□ -0.87
FN1-220ENST00000480024 SIN3AQ96ST3 1273 aa9.63□□□□□ -0.87
FN1-220ENST00000480024 CABP2Q9NPB3 220 aa9.63□□□□□ -0.87
FN1-220ENST00000480024 ZRANB1Q9UGI0 708 aa9.63□□□□□ -0.87
FN1-220ENST00000480024 CCDC61Q9Y6R9 512 aa9.63□□□□□ -0.87
FN1-220ENST00000480024 RGPD1P0DJD0 1748 aa9.62□□□□□ -0.87
FN1-220ENST00000480024 SPATA31A5Q5VU36 1347 aa9.62□□□□□ -0.87
FN1-220ENST00000480024 SPATA31A7Q8IWB4 1347 aa9.62□□□□□ -0.87
FN1-220ENST00000480024 PLEKHG3A1L390 1219 aa9.62□□□□□ -0.87
FN1-220ENST00000480024 ZC3H6P61129 1189 aaKnown RBP9.62□□□□□ -0.87
FN1-220ENST00000480024 SF3B2Q13435 895 aaKnown RBP9.62□□□□□ -0.87
FN1-220ENST00000480024 NEUROD1Q13562 356 aa9.62□□□□□ -0.87
FN1-220ENST00000480024 STRN4Q9NRL3 753 aa9.62□□□□□ -0.87
FN1-220ENST00000480024 LMO7Q8WWI1 1683 aa9.61□□□□□ -0.87
FN1-220ENST00000480024 FAM182BQ5T319 152 aa9.61□□□□□ -0.87
FN1-220ENST00000480024 ABTB2Q8N961 1025 aa9.61□□□□□ -0.87
FN1-220ENST00000480024 TNS1Q9HBL0 1735 aaKnown RBP9.61□□□□□ -0.87
FN1-220ENST00000480024 ROCK2O75116 1388 aaKnown RBP9.61□□□□□ -0.87
FN1-220ENST00000480024 USP19O94966 1318 aa9.6□□□□□ -0.87
FN1-220ENST00000480024 USP6P35125 1406 aa9.6□□□□□ -0.87
FN1-220ENST00000480024 SSH2Q76I76 1423 aa9.6□□□□□ -0.87
FN1-220ENST00000480024 PIK3C2AO00443 1686 aa9.6□□□□□ -0.87
FN1-220ENST00000480024 CAMTA1Q9Y6Y1 1673 aa9.6□□□□□ -0.87
FN1-220ENST00000480024 SPATA31A1Q5TZJ5 1347 aa9.59□□□□□ -0.87
FN1-220ENST00000480024 USP35Q9P2H5 1018 aa9.59□□□□□ -0.87
FN1-220ENST00000480024 AKAP12Q02952 1782 aa9.58□□□□□ -0.88
FN1-220ENST00000480024 CABP1Q9NZU7 370 aa9.58□□□□□ -0.88
FN1-220ENST00000480024 CPDO75976 1380 aa9.58□□□□□ -0.88
FN1-220ENST00000480024 EVC2Q86UK5 1308 aa9.57□□□□□ -0.88
FN1-220ENST00000480024 SLIT3O75094 1523 aa9.57□□□□□ -0.88
FN1-220ENST00000480024 ZBTB7CA1YPR0 619 aa9.57□□□□□ -0.88
FN1-220ENST00000480024 BAG6P46379 1132 aa9.57□□□□□ -0.88
FN1-220ENST00000480024 EVA1CP58658 441 aa9.57□□□□□ -0.88
FN1-220ENST00000480024 NLRP13Q86W25 1043 aa9.57□□□□□ -0.88
FN1-220ENST00000480024 COL5A2P05997 1499 aaPredicted RBP9.56□□□□□ -0.88
FN1-220ENST00000480024 BRD4O60885 1362 aaPredicted RBP9.56□□□□□ -0.88
FN1-220ENST00000480024 GCP02774 474 aa9.56□□□□□ -0.88
FN1-220ENST00000480024 LARP1Q6PKG0 1096 aaKnown RBP9.56□□□□□ -0.88
FN1-220ENST00000480024 WNK3Q9BYP7 1800 aa9.55□□□□□ -0.88
FN1-220ENST00000480024 NLRP6P59044 892 aa9.55□□□□□ -0.88
FN1-220ENST00000480024 MON2Q7Z3U7 1717 aa9.55□□□□□ -0.88
FN1-220ENST00000480024 PARP4Q9UKK3 1724 aaKnown RBP9.55□□□□□ -0.88
FN1-220ENST00000480024 LRP5O75197 1615 aa9.55□□□□□ -0.88
FN1-220ENST00000480024 LRRC37A3O60309 1634 aa9.54□□□□□ -0.88
FN1-220ENST00000480024 PSDA5PKW4 1024 aaPredicted RBP9.54□□□□□ -0.88
FN1-220ENST00000480024 EN1Q05925 392 aaPredicted RBP9.54□□□□□ -0.88
FN1-220ENST00000480024 COL18A1P39060 1754 aa9.54□□□□□ -0.88
FN1-220ENST00000480024 RGPD5Q99666 1765 aa9.54□□□□□ -0.88
FN1-220ENST00000480024 DISP2A7MBM2 1401 aa9.54□□□□□ -0.88
FN1-220ENST00000480024 CRB1P82279 1406 aa9.54□□□□□ -0.88
FN1-220ENST00000480024 CPSF1Q10570 1443 aaKnown RBP9.54□□□□□ -0.88
FN1-220ENST00000480024 TONSLQ96HA7 1378 aa9.53□□□□□ -0.88
FN1-220ENST00000480024 SOX12O15370 315 aa9.53□□□□□ -0.88
FN1-220ENST00000480024 TRIM37O94972 964 aa9.53□□□□□ -0.88
FN1-220ENST00000480024 BARGINQ6ZT62 677 aa9.53□□□□□ -0.88
FN1-220ENST00000480024 TCP11L2Q8N4U5 519 aa9.53□□□□□ -0.88
FN1-220ENST00000480024 AATKQ6ZMQ8 1374 aa9.52□□□□□ -0.88
FN1-220ENST00000480024 KTN1Q86UP2 1357 aaKnown RBP9.52□□□□□ -0.88
FN1-220ENST00000480024 PDE3BQ13370 1112 aa9.52□□□□□ -0.89
FN1-220ENST00000480024 FAM196AQ6ZSG2 479 aa9.52□□□□□ -0.89
FN1-220ENST00000480024 CARD11Q9BXL7 1154 aa9.52□□□□□ -0.89
FN1-220ENST00000480024 TTC21BQ7Z4L5 1316 aa9.52□□□□□ -0.89
FN1-220ENST00000480024 RREB1Q92766 1687 aa9.51□□□□□ -0.89
FN1-220ENST00000480024 NFAT5O94916 1531 aa9.51□□□□□ -0.89
FN1-220ENST00000480024 SBNO2Q9Y2G9 1366 aa9.51□□□□□ -0.89
FN1-220ENST00000480024 NUP188Q5SRE5 1749 aa9.51□□□□□ -0.89
FN1-220ENST00000480024 EZH2Q15910 746 aaKnown RBP9.51□□□□□ -0.89
FN1-220ENST00000480024 THRAP3Q9Y2W1 955 aaKnown RBP9.51□□□□□ -0.89
FN1-220ENST00000480024 PEAK1Q9H792 1746 aa9.51□□□□□ -0.89
FN1-220ENST00000480024 APBA3O96018 575 aa9.5□□□□□ -0.89
FN1-220ENST00000480024 TOM1L2Q6ZVM7 507 aa9.5□□□□□ -0.89
FN1-220ENST00000480024 USP54Q70EL1 1684 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms