RNA–Protein interactions for RNA: ENST00000480016.1

EFEMP1-211, Transcript of EGF containing fibulin extracellular matrix protein 1, humanhuman

TSL 2

Gene EFEMP1, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFEMP1-211ENST00000480016 GRIN3BO60391 1043 aa12.98□□□□□ -0.33
EFEMP1-211ENST00000480016 YBX3P16989 372 aaKnown RBP eCLIP12.98□□□□□ -0.33
EFEMP1-211ENST00000480016 PDE4DIPQ5VU43 2346 aa12.97□□□□□ -0.33
EFEMP1-211ENST00000480016 AMOTL2Q9Y2J4 779 aa12.97□□□□□ -0.33
EFEMP1-211ENST00000480016 ADGRL3Q9HAR2 1447 aa12.96□□□□□ -0.33
EFEMP1-211ENST00000480016 CD44P16070 742 aaKnown RBP12.96□□□□□ -0.33
EFEMP1-211ENST00000480016 MTFR1LQ9H019 292 aa12.96□□□□□ -0.33
EFEMP1-211ENST00000480016 EHBP1L1Q8N3D4 1523 aa12.95□□□□□ -0.34
EFEMP1-211ENST00000480016 ABHD8Q96I13 439 aa12.95□□□□□ -0.34
EFEMP1-211ENST00000480016 C1orf167Q5SNV9 1468 aa12.95□□□□□ -0.34
EFEMP1-211ENST00000480016 CROCC2H7BZ55 1655 aa12.95□□□□□ -0.34
EFEMP1-211ENST00000480016 PIK3R4Q99570 1358 aa12.93□□□□□ -0.34
EFEMP1-211ENST00000480016 PTPRUQ92729 1446 aa12.92□□□□□ -0.34
EFEMP1-211ENST00000480016 TRPM2O94759 1503 aa12.92□□□□□ -0.34
EFEMP1-211ENST00000480016 ABCC5O15440 1437 aa12.91□□□□□ -0.34
EFEMP1-211ENST00000480016 NOS1P29475 1434 aa12.91□□□□□ -0.34
EFEMP1-211ENST00000480016 RSPH4AQ5TD94 716 aa12.91□□□□□ -0.34
EFEMP1-211ENST00000480016 RPRD2Q5VT52 1461 aaKnown RBP12.91□□□□□ -0.34
EFEMP1-211ENST00000480016 TNRC18O15417 2968 aaPredicted RBP12.9□□□□□ -0.34
EFEMP1-211ENST00000480016 ADAMTS13Q76LX8 1427 aa12.9□□□□□ -0.34
EFEMP1-211ENST00000480016 FKBP8Q14318 412 aa12.89□□□□□ -0.35
EFEMP1-211ENST00000480016 PRDM10Q9NQV6 1147 aa12.89□□□□□ -0.35
EFEMP1-211ENST00000480016 ZNF644Q9H582 1327 aaPredicted RBP12.88□□□□□ -0.35
EFEMP1-211ENST00000480016 DLL1O00548 723 aa12.88□□□□□ -0.35
EFEMP1-211ENST00000480016 CHGAP10645 457 aaKnown RBP12.88□□□□□ -0.35
EFEMP1-211ENST00000480016 MBD5Q9P267 1494 aa12.88□□□□□ -0.35
EFEMP1-211ENST00000480016 NWD2Q9ULI1 1742 aa12.88□□□□□ -0.35
EFEMP1-211ENST00000480016 ZFYVE9O95405 1425 aa12.88□□□□□ -0.35
EFEMP1-211ENST00000480016 ARHGAP31Q2M1Z3 1444 aa12.88□□□□□ -0.35
EFEMP1-211ENST00000480016 NLGN2Q8NFZ4 835 aa12.87□□□□□ -0.35
EFEMP1-211ENST00000480016 LOC105371045A0A1W2PR82 267 aa12.86□□□□□ -0.35
EFEMP1-211ENST00000480016 GABBR2O75899 941 aa12.86□□□□□ -0.35
EFEMP1-211ENST00000480016 TSPY4P0CV99 314 aa12.86□□□□□ -0.35
EFEMP1-211ENST00000480016 TSPY10P0CW01 314 aa12.86□□□□□ -0.35
EFEMP1-211ENST00000480016 USP32Q8NFA0 1604 aa12.85□□□□□ -0.35
EFEMP1-211ENST00000480016 NEXMIFQ5QGS0 1516 aa12.85□□□□□ -0.35
EFEMP1-211ENST00000480016 THSD7AQ9UPZ6 1657 aa12.85□□□□□ -0.35
EFEMP1-211ENST00000480016 VPS8Q8N3P4 1428 aa12.85□□□□□ -0.35
EFEMP1-211ENST00000480016 PXDNQ92626 1479 aa12.85□□□□□ -0.35
EFEMP1-211ENST00000480016 PLCH1Q4KWH8 1693 aa12.84□□□□□ -0.35
EFEMP1-211ENST00000480016 MNX1P50219 401 aaPredicted RBP12.84□□□□□ -0.35
EFEMP1-211ENST00000480016 CCDC141Q6ZP82 1450 aa12.84□□□□□ -0.35
EFEMP1-211ENST00000480016 CEP152O94986 1710 aa12.83□□□□□ -0.36
EFEMP1-211ENST00000480016 CCDC85CA6NKD9 419 aa12.83□□□□□ -0.36
EFEMP1-211ENST00000480016 XPCQ01831 940 aaPredicted RBP12.83□□□□□ -0.36
EFEMP1-211ENST00000480016 KLHL34Q8N239 644 aa12.83□□□□□ -0.36
EFEMP1-211ENST00000480016 RBM46Q8TBY0 533 aaKnown RBP12.83□□□□□ -0.36
EFEMP1-211ENST00000480016 BCL11BQ9C0K0 894 aaPredicted RBP12.83□□□□□ -0.36
EFEMP1-211ENST00000480016 PLSCR1O15162 318 aa12.82□□□□□ -0.36
EFEMP1-211ENST00000480016 SPATA31A5Q5VU36 1347 aa12.82□□□□□ -0.36
EFEMP1-211ENST00000480016 SPATA31A7Q8IWB4 1347 aa12.82□□□□□ -0.36
EFEMP1-211ENST00000480016 FOXN1O15353 648 aa12.81□□□□□ -0.36
EFEMP1-211ENST00000480016 NPHP3Q7Z494 1330 aa12.81□□□□□ -0.36
EFEMP1-211ENST00000480016 PITPNM2Q9BZ72 1349 aa12.81□□□□□ -0.36
EFEMP1-211ENST00000480016 CLCN6P51797 869 aa12.8□□□□□ -0.36
EFEMP1-211ENST00000480016 HDGFP51858 240 aaKnown RBP12.8□□□□□ -0.36
EFEMP1-211ENST00000480016 SLC15A2Q16348 729 aa12.8□□□□□ -0.36
EFEMP1-211ENST00000480016 FSTL1Q12841 308 aa12.79□□□□□ -0.36
EFEMP1-211ENST00000480016 PTPN23Q9H3S7 1636 aa12.79□□□□□ -0.36
EFEMP1-211ENST00000480016 RIMS2Q9UQ26 1411 aa12.79□□□□□ -0.36
EFEMP1-211ENST00000480016 ADGRL2O95490 1459 aa12.78□□□□□ -0.36
EFEMP1-211ENST00000480016 ARHGEF5Q12774 1597 aa12.78□□□□□ -0.36
EFEMP1-211ENST00000480016 ZNF579Q8NAF0 562 aaKnown RBP12.78□□□□□ -0.36
EFEMP1-211ENST00000480016 FOXO3O43524 673 aa12.77□□□□□ -0.37
EFEMP1-211ENST00000480016 CABLES1Q8TDN4 633 aa12.77□□□□□ -0.37
EFEMP1-211ENST00000480016 PAK3O75914 559 aaPredicted RBP12.76□□□□□ -0.37
EFEMP1-211ENST00000480016 STK32BQ9NY57 414 aa12.76□□□□□ -0.37
EFEMP1-211ENST00000480016 PLEKHG5O94827 1062 aa12.75□□□□□ -0.37
EFEMP1-211ENST00000480016 SPATA31A3Q5VYP0 1347 aa12.75□□□□□ -0.37
EFEMP1-211ENST00000480016 NRAPQ86VF7 1730 aa12.75□□□□□ -0.37
EFEMP1-211ENST00000480016 NALCNQ8IZF0 1738 aa12.75□□□□□ -0.37
EFEMP1-211ENST00000480016 ARHGEF28Q8N1W1 1705 aaKnown RBP12.75□□□□□ -0.37
EFEMP1-211ENST00000480016 NMRK2Q9NPI5 230 aa12.75□□□□□ -0.37
EFEMP1-211ENST00000480016 BTG4Q9NY30 223 aa12.75□□□□□ -0.37
EFEMP1-211ENST00000480016 MYOM3Q5VTT5 1437 aa12.74□□□□□ -0.37
EFEMP1-211ENST00000480016 KANK4Q5T7N3 995 aaPredicted RBP12.74□□□□□ -0.37
EFEMP1-211ENST00000480016 XRN1Q8IZH2 1706 aaKnown RBP12.74□□□□□ -0.37
EFEMP1-211ENST00000480016 DHX57Q6P158 1386 aaKnown RBP12.73□□□□□ -0.37
EFEMP1-211ENST00000480016 PRPF38BQ5VTL8 546 aaKnown RBP12.73□□□□□ -0.37
EFEMP1-211ENST00000480016 MIER1Q8N108 512 aa12.73□□□□□ -0.37
EFEMP1-211ENST00000480016 RGPD3A6NKT7 1758 aaPredicted RBP12.72□□□□□ -0.37
EFEMP1-211ENST00000480016 RGPD4Q7Z3J3 1758 aa12.72□□□□□ -0.37
EFEMP1-211ENST00000480016 HAP1P54257 671 aaPredicted RBP12.72□□□□□ -0.37
EFEMP1-211ENST00000480016 PDE3BQ13370 1112 aa12.71□□□□□ -0.37
EFEMP1-211ENST00000480016 ESCO1Q5FWF5 840 aa12.71□□□□□ -0.37
EFEMP1-211ENST00000480016 MPNDQ8N594 471 aa12.71□□□□□ -0.37
EFEMP1-211ENST00000480016 SLC52A1Q9NWF4 448 aa12.71□□□□□ -0.37
EFEMP1-211ENST00000480016 CUL9Q8IWT3 2517 aa12.7□□□□□ -0.38
EFEMP1-211ENST00000480016 CTCFP49711 727 aaPredicted RBP12.7□□□□□ -0.38
EFEMP1-211ENST00000480016 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.7□□□□□ -0.38
EFEMP1-211ENST00000480016 PTF1AQ7RTS3 328 aa12.68□□□□□ -0.38
EFEMP1-211ENST00000480016 EIF2AK4Q9P2K8 1649 aaKnown RBP12.67□□□□□ -0.38
EFEMP1-211ENST00000480016 LBX1P52954 281 aa12.67□□□□□ -0.38
EFEMP1-211ENST00000480016 PLCD3Q8N3E9 789 aa12.67□□□□□ -0.38
EFEMP1-211ENST00000480016 DUOX2Q9NRD8 1548 aa12.67□□□□□ -0.38
EFEMP1-211ENST00000480016 MYO5BQ9ULV0 1848 aa12.67□□□□□ -0.38
EFEMP1-211ENST00000480016 SPATA31A1Q5TZJ5 1347 aa12.66□□□□□ -0.38
EFEMP1-211ENST00000480016 TULP4Q9NRJ4 1543 aa12.65□□□□□ -0.38
EFEMP1-211ENST00000480016 KIF15Q9NS87 1388 aa12.65□□□□□ -0.38
EFEMP1-211ENST00000480016 POLD1P28340 1107 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms