RNA–Protein interactions for RNA: ENST00000479791.1

LYSMD4-206, Transcript of LysM domain containing 4, humanhuman

TSL 5

Gene LYSMD4, Length 3,001 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-206ENST00000479791 VWDEQ8N2E2 1590 aa16.2■□□□□ 0.18
LYSMD4-206ENST00000479791 EXOSC9Q06265 439 aaKnown RBP16.2■□□□□ 0.18
LYSMD4-206ENST00000479791 HS1BP3Q53T59 392 aa16.2■□□□□ 0.18
LYSMD4-206ENST00000479791 CHD1LQ86WJ1 897 aa16.19■□□□□ 0.18
LYSMD4-206ENST00000479791 SETBP1Q9Y6X0 1596 aa16.19■□□□□ 0.18
LYSMD4-206ENST00000479791 NOS1P29475 1434 aa16.19■□□□□ 0.18
LYSMD4-206ENST00000479791 U2AF1L5P0DN76 240 aaPredicted RBP16.19■□□□□ 0.18
LYSMD4-206ENST00000479791 MSNP26038 577 aaKnown RBP16.19■□□□□ 0.18
LYSMD4-206ENST00000479791 U2AF1Q01081 240 aaKnown RBP eCLIP16.19■□□□□ 0.18
LYSMD4-206ENST00000479791 TSR2Q969E8 191 aaKnown RBP16.19■□□□□ 0.18
LYSMD4-206ENST00000479791 SLC12A5Q9H2X9 1139 aa16.19■□□□□ 0.18
LYSMD4-206ENST00000479791 ABCC11Q96J66 1382 aa16.19■□□□□ 0.18
LYSMD4-206ENST00000479791 SPAG9O60271 1321 aaKnown RBP16.19■□□□□ 0.18
LYSMD4-206ENST00000479791 TMEM57Q8N5G2 664 aa16.19■□□□□ 0.18
LYSMD4-206ENST00000479791 NOB1Q9ULX3 412 aaKnown RBP16.19■□□□□ 0.18
LYSMD4-206ENST00000479791 IFT172Q9UG01 1749 aa16.18■□□□□ 0.18
LYSMD4-206ENST00000479791 IL16Q14005 1332 aa16.18■□□□□ 0.18
LYSMD4-206ENST00000479791 IPO8O15397 1037 aaKnown RBP16.18■□□□□ 0.18
LYSMD4-206ENST00000479791 NSD2O96028 1365 aa16.18■□□□□ 0.18
LYSMD4-206ENST00000479791 CFAP74Q9C0B2 1584 aa16.17■□□□□ 0.18
LYSMD4-206ENST00000479791 LNPKQ9C0E8 428 aa16.17■□□□□ 0.18
LYSMD4-206ENST00000479791 ZNF445P59923 1031 aa16.17■□□□□ 0.18
LYSMD4-206ENST00000479791 MAP7D2Q96T17 732 aa16.17■□□□□ 0.18
LYSMD4-206ENST00000479791 ZFYVE16Q7Z3T8 1539 aa16.17■□□□□ 0.18
LYSMD4-206ENST00000479791 CD2BP2O95400 341 aaKnown RBP16.16■□□□□ 0.18
LYSMD4-206ENST00000479791 DDX49Q9Y6V7 483 aaKnown RBP16.16■□□□□ 0.18
LYSMD4-206ENST00000479791 CALD1Q05682 793 aaKnown RBP16.16■□□□□ 0.18
LYSMD4-206ENST00000479791 INO80Q9ULG1 1556 aaPredicted RBP16.16■□□□□ 0.18
LYSMD4-206ENST00000479791 SSFA2P28290 1259 aa16.16■□□□□ 0.18
LYSMD4-206ENST00000479791 KIF1BO60333 1816 aa16.15■□□□□ 0.18
LYSMD4-206ENST00000479791 ZC3H13Q5T200 1668 aaKnown RBP16.15■□□□□ 0.18
LYSMD4-206ENST00000479791 BAG4O95429 457 aaKnown RBP16.15■□□□□ 0.18
LYSMD4-206ENST00000479791 PLEKHF1Q96S99 279 aa16.14■□□□□ 0.17
LYSMD4-206ENST00000479791 TMPOP42166 694 aaKnown RBP16.14■□□□□ 0.17
LYSMD4-206ENST00000479791 GCC1Q96CN9 775 aa16.14■□□□□ 0.17
LYSMD4-206ENST00000479791 PUS7Q96PZ0 661 aaKnown RBP16.14■□□□□ 0.17
LYSMD4-206ENST00000479791 TRIM35Q9UPQ4 493 aa16.14■□□□□ 0.17
LYSMD4-206ENST00000479791 CD109Q6YHK3 1445 aa16.14■□□□□ 0.17
LYSMD4-206ENST00000479791 RIPK4P57078 832 aa16.13■□□□□ 0.17
LYSMD4-206ENST00000479791 GAS2L2Q8NHY3 880 aa16.13■□□□□ 0.17
LYSMD4-206ENST00000479791 ZNF500O60304 480 aaPredicted RBP16.13■□□□□ 0.17
LYSMD4-206ENST00000479791 ALDH1L2Q3SY69 923 aa16.13■□□□□ 0.17
LYSMD4-206ENST00000479791 NOL7Q9UMY1 257 aaKnown RBP16.13■□□□□ 0.17
LYSMD4-206ENST00000479791 FOXD4L1Q9NU39 408 aa16.13■□□□□ 0.17
LYSMD4-206ENST00000479791 QRICH2Q9H0J4 1663 aa16.13■□□□□ 0.17
LYSMD4-206ENST00000479791 TBC1D9Q6ZT07 1266 aa16.12■□□□□ 0.17
LYSMD4-206ENST00000479791 REREQ9P2R6 1566 aa16.12■□□□□ 0.17
LYSMD4-206ENST00000479791 UGGT1Q9NYU2 1555 aa16.12■□□□□ 0.17
LYSMD4-206ENST00000479791 CHMP4BQ9H444 224 aaKnown RBP16.12■□□□□ 0.17
LYSMD4-206ENST00000479791 PDLIM2Q96JY6 352 aa16.11■□□□□ 0.17
LYSMD4-206ENST00000479791 MED14O60244 1454 aa16.11■□□□□ 0.17
LYSMD4-206ENST00000479791 NUCB2P80303 420 aa16.11■□□□□ 0.17
LYSMD4-206ENST00000479791 ANKRD36BQ8N2N9 1353 aa16.11■□□□□ 0.17
LYSMD4-206ENST00000479791 BRPF1P55201 1214 aaPredicted RBP16.11■□□□□ 0.17
LYSMD4-206ENST00000479791 ANKRD45Q5TZF3 282 aa16.1■□□□□ 0.17
LYSMD4-206ENST00000479791 AFAP1Q8N556 730 aa16.1■□□□□ 0.17
LYSMD4-206ENST00000479791 RBM42Q9BTD8 480 aaKnown RBP16.1■□□□□ 0.17
LYSMD4-206ENST00000479791 TRAK1Q9UPV9 953 aa16.1■□□□□ 0.17
LYSMD4-206ENST00000479791 ZNF428Q96B54 188 aa16.09■□□□□ 0.17
LYSMD4-206ENST00000479791 CFAP44Q96MT7 982 aa16.09■□□□□ 0.17
LYSMD4-206ENST00000479791 ARAP3Q8WWN8 1544 aa16.09■□□□□ 0.17
LYSMD4-206ENST00000479791 MROH2AA6NES4 1674 aa16.09■□□□□ 0.17
LYSMD4-206ENST00000479791 ZSCAN23Q3MJ62 389 aa16.08■□□□□ 0.17
LYSMD4-206ENST00000479791 C14orf93Q9H972 538 aaKnown RBP16.08■□□□□ 0.17
LYSMD4-206ENST00000479791 PPIP5K1Q6PFW1 1433 aa16.08■□□□□ 0.16
LYSMD4-206ENST00000479791 CYP2E1P05181 493 aaPredicted RBP16.08■□□□□ 0.16
LYSMD4-206ENST00000479791 MCM5P33992 734 aa16.08■□□□□ 0.16
LYSMD4-206ENST00000479791 RABEP1Q15276 862 aa16.08■□□□□ 0.16
LYSMD4-206ENST00000479791 MTERF4Q7Z6M4 381 aaKnown RBP16.08■□□□□ 0.16
LYSMD4-206ENST00000479791 FANCAO15360 1455 aa16.07■□□□□ 0.16
LYSMD4-206ENST00000479791 ADGRB1O14514 1584 aa16.07■□□□□ 0.16
LYSMD4-206ENST00000479791 ZBTB7BO15156 539 aaPredicted RBP16.07■□□□□ 0.16
LYSMD4-206ENST00000479791 CDC45O75419 566 aa16.07■□□□□ 0.16
LYSMD4-206ENST00000479791 LMBRD1Q9NUN5 540 aa16.07■□□□□ 0.16
LYSMD4-206ENST00000479791 R3HCC1Q9Y3T6 440 aaKnown RBP16.07■□□□□ 0.16
LYSMD4-206ENST00000479791 CSPP1Q1MSJ5 1256 aa16.07■□□□□ 0.16
LYSMD4-206ENST00000479791 EFCAB6Q5THR3 1501 aa16.07■□□□□ 0.16
LYSMD4-206ENST00000479791 KIF3BO15066 747 aa16.06■□□□□ 0.16
LYSMD4-206ENST00000479791 MCTP1Q6DN14 999 aa16.06■□□□□ 0.16
LYSMD4-206ENST00000479791 CAVIN1Q6NZI2 390 aaKnown RBP16.06■□□□□ 0.16
LYSMD4-206ENST00000479791 ADGRB3O60242 1522 aa16.06■□□□□ 0.16
LYSMD4-206ENST00000479791 PPRC1Q5VV67 1664 aaKnown RBP16.06■□□□□ 0.16
LYSMD4-206ENST00000479791 RBM10P98175 930 aaKnown RBP16.06■□□□□ 0.16
LYSMD4-206ENST00000479791 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.06■□□□□ 0.16
LYSMD4-206ENST00000479791 COL3A1P02461 1466 aaPredicted RBP16.06■□□□□ 0.16
LYSMD4-206ENST00000479791 MROH1Q8NDA8 1641 aa16.06■□□□□ 0.16
LYSMD4-206ENST00000479791 ATP7AQ04656 1500 aa16.05■□□□□ 0.16
LYSMD4-206ENST00000479791 RBSNQ9H1K0 784 aa16.05■□□□□ 0.16
LYSMD4-206ENST00000479791 PIK3R4Q99570 1358 aa16.05■□□□□ 0.16
LYSMD4-206ENST00000479791 U2SURPO15042 1029 aaKnown RBP16.05■□□□□ 0.16
LYSMD4-206ENST00000479791 CWC22Q9HCG8 908 aaKnown RBP16.05■□□□□ 0.16
LYSMD4-206ENST00000479791 ZKSCAN5Q9Y2L8 839 aa16.05■□□□□ 0.16
LYSMD4-206ENST00000479791 ARHGAP45Q92619 1136 aa16.05■□□□□ 0.16
LYSMD4-206ENST00000479791 FAM13BQ9NYF5 915 aa16.05■□□□□ 0.16
LYSMD4-206ENST00000479791 PRDM4Q9UKN5 801 aa16.05■□□□□ 0.16
LYSMD4-206ENST00000479791 EVC2Q86UK5 1308 aa16.04■□□□□ 0.16
LYSMD4-206ENST00000479791 DYNC1I1O14576 645 aa16.04■□□□□ 0.16
LYSMD4-206ENST00000479791 UQCRHLA0A096LP55 91 aa16.03■□□□□ 0.16
LYSMD4-206ENST00000479791 UQCRHP07919 91 aa16.03■□□□□ 0.16
LYSMD4-206ENST00000479791 NCLP19338 710 aaKnown RBP16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms