RNA–Protein interactions for RNA: ENST00000479615.5

PRKN-207, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene PRKN, Length 904 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-207ENST00000479615 FAM83GA6ND36 823 aa21.5■■□□□ 1.03
PRKN-207ENST00000479615 EVC2Q86UK5 1308 aa21.5■■□□□ 1.03
PRKN-207ENST00000479615 ALS2Q96Q42 1657 aa21.47■■□□□ 1.03
PRKN-207ENST00000479615 PLEKHG5O94827 1062 aa21.47■■□□□ 1.03
PRKN-207ENST00000479615 CCDC125Q86Z20 511 aa21.47■■□□□ 1.03
PRKN-207ENST00000479615 TONSLQ96HA7 1378 aa21.47■■□□□ 1.03
PRKN-207ENST00000479615 RALGAPBQ86X10 1494 aa21.46■■□□□ 1.03
PRKN-207ENST00000479615 ONECUT3O60422 494 aaPredicted RBP21.46■■□□□ 1.03
PRKN-207ENST00000479615 CABP2Q9NPB3 220 aa21.46■■□□□ 1.03
PRKN-207ENST00000479615 PPIP5K1Q6PFW1 1433 aa21.46■■□□□ 1.03
PRKN-207ENST00000479615 TRPM1Q7Z4N2 1603 aa21.45■■□□□ 1.02
PRKN-207ENST00000479615 CCDC9Q9Y3X0 531 aaKnown RBP21.45■■□□□ 1.02
PRKN-207ENST00000479615 NWD2Q9ULI1 1742 aa21.45■■□□□ 1.02
PRKN-207ENST00000479615 BTG4Q9NY30 223 aa21.44■■□□□ 1.02
PRKN-207ENST00000479615 ABTB2Q8N961 1025 aa21.43■■□□□ 1.02
PRKN-207ENST00000479615 PRDM11Q9NQV5 511 aa21.43■■□□□ 1.02
PRKN-207ENST00000479615 TOPAZ1Q8N9V7 1692 aa21.43■■□□□ 1.02
PRKN-207ENST00000479615 NLRP13Q86W25 1043 aa21.42■■□□□ 1.02
PRKN-207ENST00000479615 ABCA3Q99758 1704 aa21.42■■□□□ 1.02
PRKN-207ENST00000479615 ZNF692Q9BU19 519 aaPredicted RBP21.42■■□□□ 1.02
PRKN-207ENST00000479615 CARD11Q9BXL7 1154 aa21.41■■□□□ 1.02
PRKN-207ENST00000479615 CABP1Q9NZU7 370 aa21.41■■□□□ 1.02
PRKN-207ENST00000479615 SEPT12Q8IYM1 358 aa21.4■■□□□ 1.02
PRKN-207ENST00000479615 COL14A1Q05707 1796 aaKnown RBP21.4■■□□□ 1.02
PRKN-207ENST00000479615 QRICH2Q9H0J4 1663 aa21.4■■□□□ 1.02
PRKN-207ENST00000479615 SBNO2Q9Y2G9 1366 aa21.39■■□□□ 1.02
PRKN-207ENST00000479615 SLC24A1O60721 1099 aa21.39■■□□□ 1.01
PRKN-207ENST00000479615 GLI3P10071 1580 aa21.39■■□□□ 1.01
PRKN-207ENST00000479615 PLCH1Q4KWH8 1693 aa21.37■■□□□ 1.01
PRKN-207ENST00000479615 KIAA0232Q92628 1395 aa21.37■■□□□ 1.01
PRKN-207ENST00000479615 USP19O94966 1318 aa21.36■■□□□ 1.01
PRKN-207ENST00000479615 NUTM2GQ5VZR2 741 aa21.35■■□□□ 1.01
PRKN-207ENST00000479615 USP6P35125 1406 aa21.35■■□□□ 1.01
PRKN-207ENST00000479615 CPDO75976 1380 aa21.35■■□□□ 1.01
PRKN-207ENST00000479615 SPATA31A5Q5VU36 1347 aa21.34■■□□□ 1.01
PRKN-207ENST00000479615 SPATA31A7Q8IWB4 1347 aa21.34■■□□□ 1.01
PRKN-207ENST00000479615 ZC3H6P61129 1189 aaKnown RBP21.34■■□□□ 1.01
PRKN-207ENST00000479615 KRT27Q7Z3Y8 459 aa21.34■■□□□ 1.01
PRKN-207ENST00000479615 GCP02774 474 aa21.33■■□□□ 1.01
PRKN-207ENST00000479615 PUS7Q96PZ0 661 aaKnown RBP21.33■■□□□ 1.01
PRKN-207ENST00000479615 CRYBG1Q9Y4K1 1723 aa21.32■■□□□ 1
PRKN-207ENST00000479615 NLRP6P59044 892 aa21.32■■□□□ 1
PRKN-207ENST00000479615 A0A0G2JS52 829 aa21.31■■□□□ 1
PRKN-207ENST00000479615 EVA1CP58658 441 aa21.31■■□□□ 1
PRKN-207ENST00000479615 MYT1Q01538 1121 aa21.31■■□□□ 1
PRKN-207ENST00000479615 FAM98CQ17RN3 349 aaKnown RBP21.31■■□□□ 1
PRKN-207ENST00000479615 TTC21AQ8NDW8 1320 aa21.3■■□□□ 1
PRKN-207ENST00000479615 SF3B2Q13435 895 aaKnown RBP21.3■■□□□ 1
PRKN-207ENST00000479615 CHRNA2Q15822 529 aa21.3■■□□□ 1
PRKN-207ENST00000479615 BLMP54132 1417 aaPredicted RBP21.29■■□□□ 1
PRKN-207ENST00000479615 SSH2Q76I76 1423 aa21.29■■□□□ 1
PRKN-207ENST00000479615 NRAPQ86VF7 1730 aa21.29■■□□□ 1
PRKN-207ENST00000479615 TIMELESSQ9UNS1 1208 aa21.29■■□□□ 1
PRKN-207ENST00000479615 SPATA31A1Q5TZJ5 1347 aa21.29■■□□□ 1
PRKN-207ENST00000479615 KCNH5Q8NCM2 988 aa21.28■■□□□ 1
PRKN-207ENST00000479615 PHRF1Q9P1Y6 1649 aaKnown RBP21.28■■□□□ 1
PRKN-207ENST00000479615 CLSPNQ9HAW4 1339 aa21.28■■□□□ 1
PRKN-207ENST00000479615 STRN4Q9NRL3 753 aa21.27■■□□□ 1
PRKN-207ENST00000479615 TTC21BQ7Z4L5 1316 aa21.27■□□□□ 0.99
PRKN-207ENST00000479615 CPSF1Q10570 1443 aaKnown RBP21.26■□□□□ 0.99
PRKN-207ENST00000479615 BARGINQ6ZT62 677 aa21.25■□□□□ 0.99
PRKN-207ENST00000479615 NRKQ7Z2Y5 1582 aa21.25■□□□□ 0.99
PRKN-207ENST00000479615 THRAP3Q9Y2W1 955 aaKnown RBP21.25■□□□□ 0.99
PRKN-207ENST00000479615 KTN1Q86UP2 1357 aaKnown RBP21.24■□□□□ 0.99
PRKN-207ENST00000479615 AATKQ6ZMQ8 1374 aa21.23■□□□□ 0.99
PRKN-207ENST00000479615 HDGFL2Q7Z4V5 671 aaPredicted RBP21.23■□□□□ 0.99
PRKN-207ENST00000479615 TERF2IPQ9NYB0 399 aa21.22■□□□□ 0.99
PRKN-207ENST00000479615 ZRANB1Q9UGI0 708 aa21.22■□□□□ 0.99
PRKN-207ENST00000479615 SLIT3O75094 1523 aa21.21■□□□□ 0.99
PRKN-207ENST00000479615 TCP11L2Q8N4U5 519 aa21.21■□□□□ 0.99
PRKN-207ENST00000479615 TMC1Q8TDI8 760 aa21.21■□□□□ 0.99
PRKN-207ENST00000479615 NINLQ9Y2I6 1382 aa21.21■□□□□ 0.99
PRKN-207ENST00000479615 CAMTA1Q9Y6Y1 1673 aa21.2■□□□□ 0.98
PRKN-207ENST00000479615 EP400Q96L91 3159 aa21.19■□□□□ 0.98
PRKN-207ENST00000479615 ST20-MTHFSA0A0A6YYL1 179 aa21.19■□□□□ 0.98
PRKN-207ENST00000479615 LARP1Q6PKG0 1096 aaKnown RBP21.19■□□□□ 0.98
PRKN-207ENST00000479615 BRWD3Q6RI45 1802 aa21.18■□□□□ 0.98
PRKN-207ENST00000479615 C11orf95C9JLR9 678 aaPredicted RBP21.18■□□□□ 0.98
PRKN-207ENST00000479615 FAM196AQ6ZSG2 479 aa21.18■□□□□ 0.98
PRKN-207ENST00000479615 USP35Q9P2H5 1018 aa21.18■□□□□ 0.98
PRKN-207ENST00000479615 BAG6P46379 1132 aa21.17■□□□□ 0.98
PRKN-207ENST00000479615 ARHGEF25Q86VW2 580 aa21.17■□□□□ 0.98
PRKN-207ENST00000479615 TESK2Q96S53 571 aa21.17■□□□□ 0.98
PRKN-207ENST00000479615 LMO7Q8WWI1 1683 aa21.17■□□□□ 0.98
PRKN-207ENST00000479615 THSD7AQ9UPZ6 1657 aa21.16■□□□□ 0.98
PRKN-207ENST00000479615 COL5A2P05997 1499 aaPredicted RBP21.16■□□□□ 0.98
PRKN-207ENST00000479615 USP31Q70CQ4 1352 aa21.16■□□□□ 0.98
PRKN-207ENST00000479615 PDE3BQ13370 1112 aa21.16■□□□□ 0.98
PRKN-207ENST00000479615 AKAP12Q02952 1782 aa21.15■□□□□ 0.98
PRKN-207ENST00000479615 CRB1P82279 1406 aa21.15■□□□□ 0.98
PRKN-207ENST00000479615 SLC12A5Q9H2X9 1139 aa21.15■□□□□ 0.98
PRKN-207ENST00000479615 PIK3C2AO00443 1686 aa21.15■□□□□ 0.98
PRKN-207ENST00000479615 ZBTB7CA1YPR0 619 aa21.14■□□□□ 0.97
PRKN-207ENST00000479615 CDCA8Q53HL2 280 aa21.14■□□□□ 0.97
PRKN-207ENST00000479615 EDC4Q6P2E9 1401 aaKnown RBP21.13■□□□□ 0.97
PRKN-207ENST00000479615 TMF1P82094 1093 aa21.13■□□□□ 0.97
PRKN-207ENST00000479615 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.13■□□□□ 0.97
PRKN-207ENST00000479615 CDCA7Q9BWT1 371 aaPredicted RBP21.13■□□□□ 0.97
PRKN-207ENST00000479615 TOM1L2Q6ZVM7 507 aa21.12■□□□□ 0.97
PRKN-207ENST00000479615 DEFB132Q7Z7B7 95 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms