RNA–Protein interactions for RNA: ENST00000479339.5

CNKSR3-204, Transcript of CNKSR family member 3, humanhuman

TSL 1 (best) BASIC

Gene CNKSR3, Length 2,023 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3-204ENST00000479339 ORAI2Q96SN7 254 aa17.09■□□□□ 0.33
CNKSR3-204ENST00000479339 LRP6O75581 1613 aa17.09■□□□□ 0.33
CNKSR3-204ENST00000479339 DDX17Q92841 729 aaKnown RBP17.08■□□□□ 0.33
CNKSR3-204ENST00000479339 RRAGDQ9NQL2 400 aaPredicted RBP17.08■□□□□ 0.32
CNKSR3-204ENST00000479339 EXOC6Q8TAG9 804 aa17.07■□□□□ 0.32
CNKSR3-204ENST00000479339 DLC1Q96QB1 1528 aa17.07■□□□□ 0.32
CNKSR3-204ENST00000479339 ADGRB1O14514 1584 aa17.06■□□□□ 0.32
CNKSR3-204ENST00000479339 SOS2Q07890 1332 aaPredicted RBP17.06■□□□□ 0.32
CNKSR3-204ENST00000479339 KDM2AQ9Y2K7 1162 aa17.06■□□□□ 0.32
CNKSR3-204ENST00000479339 POTEAQ6S8J7 498 aa17.05■□□□□ 0.32
CNKSR3-204ENST00000479339 PNPLA6Q8IY17 1366 aa17.05■□□□□ 0.32
CNKSR3-204ENST00000479339 PNNQ9H307 717 aaKnown RBP17.04■□□□□ 0.32
CNKSR3-204ENST00000479339 CLCN1P35523 988 aa17.04■□□□□ 0.32
CNKSR3-204ENST00000479339 KIF7Q2M1P5 1343 aa17.04■□□□□ 0.32
CNKSR3-204ENST00000479339 FRAT2O75474 233 aaPredicted RBP17.03■□□□□ 0.32
CNKSR3-204ENST00000479339 MEX3CQ5U5Q3 659 aaKnown RBP17.03■□□□□ 0.32
CNKSR3-204ENST00000479339 NAP1L5Q96NT1 182 aaPredicted RBP17.03■□□□□ 0.32
CNKSR3-204ENST00000479339 ESCO1Q5FWF5 840 aa17.03■□□□□ 0.32
CNKSR3-204ENST00000479339 PRAM1Q96QH2 718 aa17.03■□□□□ 0.32
CNKSR3-204ENST00000479339 FMN2Q9NZ56 1722 aa17.02■□□□□ 0.32
CNKSR3-204ENST00000479339 NPHP3Q7Z494 1330 aa17.01■□□□□ 0.31
CNKSR3-204ENST00000479339 RCAN3Q9UKA8 241 aa17.01■□□□□ 0.31
CNKSR3-204ENST00000479339 CENPJQ9HC77 1338 aaPredicted RBP17.01■□□□□ 0.31
CNKSR3-204ENST00000479339 NUTM2BA6NNL0 878 aaPredicted RBP17.01■□□□□ 0.31
CNKSR3-204ENST00000479339 NUTM2EB1AL46 878 aaPredicted RBP17.01■□□□□ 0.31
CNKSR3-204ENST00000479339 PDE3BQ13370 1112 aa17.01■□□□□ 0.31
CNKSR3-204ENST00000479339 NUTM2AQ8IVF1 878 aaPredicted RBP17.01■□□□□ 0.31
CNKSR3-204ENST00000479339 PXDNQ92626 1479 aa16.99■□□□□ 0.31
CNKSR3-204ENST00000479339 ZNF772Q68DY9 489 aaPredicted RBP16.99■□□□□ 0.31
CNKSR3-204ENST00000479339 PNISRQ8TF01 805 aaKnown RBP16.99■□□□□ 0.31
CNKSR3-204ENST00000479339 POGKQ9P215 609 aa16.99■□□□□ 0.31
CNKSR3-204ENST00000479339 NUTM2FA1L443 756 aa16.98■□□□□ 0.31
CNKSR3-204ENST00000479339 TRAK1Q9UPV9 953 aa16.98■□□□□ 0.31
CNKSR3-204ENST00000479339 ADGRB2O60241 1585 aa16.97■□□□□ 0.31
CNKSR3-204ENST00000479339 KTN1Q86UP2 1357 aaKnown RBP16.97■□□□□ 0.31
CNKSR3-204ENST00000479339 FOXO3O43524 673 aa16.97■□□□□ 0.31
CNKSR3-204ENST00000479339 PLEKHG5O94827 1062 aa16.97■□□□□ 0.31
CNKSR3-204ENST00000479339 SAFB2Q14151 953 aaKnown RBP eCLIP16.97■□□□□ 0.31
CNKSR3-204ENST00000479339 KIF1AQ12756 1690 aa16.97■□□□□ 0.31
CNKSR3-204ENST00000479339 FAM161AQ3B820 660 aa16.96■□□□□ 0.31
CNKSR3-204ENST00000479339 ANKARQ7Z5J8 1434 aa16.95■□□□□ 0.3
CNKSR3-204ENST00000479339 COL22A1Q8NFW1 1626 aaPredicted RBP16.95■□□□□ 0.3
CNKSR3-204ENST00000479339 SLC4A3P48751 1232 aa16.94■□□□□ 0.3
CNKSR3-204ENST00000479339 KIAA1210Q9ULL0 1709 aa16.94■□□□□ 0.3
CNKSR3-204ENST00000479339 AFF2P51816 1311 aa16.93■□□□□ 0.3
CNKSR3-204ENST00000479339 BRD4O60885 1362 aaPredicted RBP16.93■□□□□ 0.3
CNKSR3-204ENST00000479339 ROCK2O75116 1388 aaKnown RBP16.93■□□□□ 0.3
CNKSR3-204ENST00000479339 PHF8Q9UPP1 1060 aa16.93■□□□□ 0.3
CNKSR3-204ENST00000479339 XPCQ01831 940 aaPredicted RBP16.92■□□□□ 0.3
CNKSR3-204ENST00000479339 EIF3AQ14152 1382 aaKnown RBP16.92■□□□□ 0.3
CNKSR3-204ENST00000479339 C8orf37Q96NL8 207 aa16.91■□□□□ 0.3
CNKSR3-204ENST00000479339 SPATA31A3Q5VYP0 1347 aa16.91■□□□□ 0.3
CNKSR3-204ENST00000479339 MINK1Q8N4C8 1332 aaPredicted RBP16.91■□□□□ 0.3
CNKSR3-204ENST00000479339 TPM2P07951 284 aa16.91■□□□□ 0.3
CNKSR3-204ENST00000479339 CALD1Q05682 793 aaKnown RBP16.91■□□□□ 0.3
CNKSR3-204ENST00000479339 KRT28Q7Z3Y7 464 aa16.91■□□□□ 0.3
CNKSR3-204ENST00000479339 TMC1Q8TDI8 760 aa16.91■□□□□ 0.3
CNKSR3-204ENST00000479339 ARHGEF28Q8N1W1 1705 aaKnown RBP16.9■□□□□ 0.3
CNKSR3-204ENST00000479339 USP32Q8NFA0 1604 aa16.9■□□□□ 0.3
CNKSR3-204ENST00000479339 WASLO00401 505 aaPredicted RBP16.9■□□□□ 0.3
CNKSR3-204ENST00000479339 L3MBTL2Q969R5 705 aa16.9■□□□□ 0.3
CNKSR3-204ENST00000479339 ADAMTS2O95450 1211 aa16.89■□□□□ 0.29
CNKSR3-204ENST00000479339 CENPQQ7L2Z9 268 aaPredicted RBP16.89■□□□□ 0.29
CNKSR3-204ENST00000479339 TULP4Q9NRJ4 1543 aa16.89■□□□□ 0.29
CNKSR3-204ENST00000479339 PSME1Q06323 249 aa16.89■□□□□ 0.29
CNKSR3-204ENST00000479339 PDCL3Q9H2J4 239 aa16.89■□□□□ 0.29
CNKSR3-204ENST00000479339 KDM2BQ8NHM5 1336 aa16.89■□□□□ 0.29
CNKSR3-204ENST00000479339 RGPD8O14715 1765 aaPredicted RBP16.88■□□□□ 0.29
CNKSR3-204ENST00000479339 VIRMAQ69YN4 1812 aaKnown RBP16.88■□□□□ 0.29
CNKSR3-204ENST00000479339 SBNO1A3KN83 1393 aa16.88■□□□□ 0.29
CNKSR3-204ENST00000479339 RXRBP28702 533 aa16.87■□□□□ 0.29
CNKSR3-204ENST00000479339 NBPF1Q3BBV0 1214 aa16.87■□□□□ 0.29
CNKSR3-204ENST00000479339 C8orf34Q49A92 452 aa16.87■□□□□ 0.29
CNKSR3-204ENST00000479339 NGLY1Q96IV0 654 aa16.87■□□□□ 0.29
CNKSR3-204ENST00000479339 PRR36Q9H6K5 1346 aa16.87■□□□□ 0.29
CNKSR3-204ENST00000479339 INSRP06213 1382 aa16.87■□□□□ 0.29
CNKSR3-204ENST00000479339 CDK12Q9NYV4 1490 aaPredicted RBP16.87■□□□□ 0.29
CNKSR3-204ENST00000479339 FNBP4Q8N3X1 1017 aaPredicted RBP16.86■□□□□ 0.29
CNKSR3-204ENST00000479339 TNS3Q68CZ2 1445 aa16.86■□□□□ 0.29
CNKSR3-204ENST00000479339 GOLGA6L3A6NEY3 463 aa16.86■□□□□ 0.29
CNKSR3-204ENST00000479339 PMFBP1Q8TBY8 1022 aa16.85■□□□□ 0.29
CNKSR3-204ENST00000479339 QTRT2Q9H974 415 aaKnown RBP16.85■□□□□ 0.29
CNKSR3-204ENST00000479339 FSD2A1L4K1 749 aa16.84■□□□□ 0.29
CNKSR3-204ENST00000479339 BECN1Q14457 450 aa16.84■□□□□ 0.29
CNKSR3-204ENST00000479339 MYBBP1AQ9BQG0 1328 aaKnown RBP16.83■□□□□ 0.28
CNKSR3-204ENST00000479339 ARHGEF10O15013 1369 aa16.83■□□□□ 0.28
CNKSR3-204ENST00000479339 RBM6P78332 1123 aaKnown RBP16.82■□□□□ 0.28
CNKSR3-204ENST00000479339 USP21Q9UK80 565 aa16.82■□□□□ 0.28
CNKSR3-204ENST00000479339 ATP7BP35670 1465 aa16.82■□□□□ 0.28
CNKSR3-204ENST00000479339 RALBP1Q15311 655 aa16.82■□□□□ 0.28
CNKSR3-204ENST00000479339 NUDT16Q96DE0 195 aaKnown RBP16.81■□□□□ 0.28
CNKSR3-204ENST00000479339 CDK19Q9BWU1 502 aa16.81■□□□□ 0.28
CNKSR3-204ENST00000479339 ISY1Q9ULR0 285 aaKnown RBP16.81■□□□□ 0.28
CNKSR3-204ENST00000479339 GPRASP1Q5JY77 1395 aa16.81■□□□□ 0.28
CNKSR3-204ENST00000479339 ATRNO75882 1429 aa16.8■□□□□ 0.28
CNKSR3-204ENST00000479339 XRCC6P12956 609 aaKnown RBP eCLIP16.8■□□□□ 0.28
CNKSR3-204ENST00000479339 NBPF8Q3BBV2 869 aa16.8■□□□□ 0.28
CNKSR3-204ENST00000479339 CRBNQ96SW2 442 aa16.8■□□□□ 0.28
CNKSR3-204ENST00000479339 TRPC5Q9UL62 973 aaPredicted RBP16.8■□□□□ 0.28
CNKSR3-204ENST00000479339 MARF1Q9Y4F3 1742 aaKnown RBP16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 125.1 ms