RNA–Protein interactions for RNA: ENST00000479294.2

SRRM3-203, Transcript of serine/arginine repetitive matrix 3, humanhuman

TSL 2

Gene SRRM3, Length 549 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3-203ENST00000479294 CABP1Q9NZU7 370 aa32.17■■■□□ 2.74
SRRM3-203ENST00000479294 TOPAZ1Q8N9V7 1692 aa32.17■■■□□ 2.74
SRRM3-203ENST00000479294 ATRNO75882 1429 aa32.15■■■□□ 2.74
SRRM3-203ENST00000479294 UNC5CLQ8IV45 518 aa32.14■■■□□ 2.74
SRRM3-203ENST00000479294 SBNO2Q9Y2G9 1366 aa32.14■■■□□ 2.74
SRRM3-203ENST00000479294 SLIT2O94813 1529 aa32.13■■■□□ 2.73
SRRM3-203ENST00000479294 ALS2Q96Q42 1657 aa32.13■■■□□ 2.73
SRRM3-203ENST00000479294 TIMELESSQ9UNS1 1208 aa32.13■■■□□ 2.73
SRRM3-203ENST00000479294 MARF1Q9Y4F3 1742 aaKnown RBP32.1■■■□□ 2.73
SRRM3-203ENST00000479294 FAM83GA6ND36 823 aa32.1■■■□□ 2.73
SRRM3-203ENST00000479294 BRD4O60885 1362 aaPredicted RBP32.08■■■□□ 2.73
SRRM3-203ENST00000479294 ABTB2Q8N961 1025 aa32.08■■■□□ 2.73
SRRM3-203ENST00000479294 GJD4Q96KN9 370 aaPredicted RBP32.08■■■□□ 2.73
SRRM3-203ENST00000479294 RGS12O14924 1447 aa32.08■■■□□ 2.73
SRRM3-203ENST00000479294 ATAD2Q6PL18 1390 aa32.07■■■□□ 2.73
SRRM3-203ENST00000479294 NUTM2GQ5VZR2 741 aa32.07■■■□□ 2.72
SRRM3-203ENST00000479294 ABCA3Q99758 1704 aa32.03■■■□□ 2.72
SRRM3-203ENST00000479294 USP6P35125 1406 aa32.03■■■□□ 2.72
SRRM3-203ENST00000479294 ZNF692Q9BU19 519 aaPredicted RBP32.03■■■□□ 2.72
SRRM3-203ENST00000479294 VPS72Q15906 364 aa32.02■■■□□ 2.72
SRRM3-203ENST00000479294 CCER1Q8TC90 406 aaPredicted RBP32.02■■■□□ 2.72
SRRM3-203ENST00000479294 NLRP13Q86W25 1043 aa32.01■■■□□ 2.71
SRRM3-203ENST00000479294 PRDM11Q9NQV5 511 aa32.01■■■□□ 2.71
SRRM3-203ENST00000479294 ST20-MTHFSA0A0A6YYL1 179 aa32■■■□□ 2.71
SRRM3-203ENST00000479294 BTG4Q9NY30 223 aa32■■■□□ 2.71
SRRM3-203ENST00000479294 SLC24A1O60721 1099 aa31.98■■■□□ 2.71
SRRM3-203ENST00000479294 TESK2Q96S53 571 aa31.97■■■□□ 2.71
SRRM3-203ENST00000479294 TNKS1BP1Q9C0C2 1729 aaKnown RBP31.97■■■□□ 2.71
SRRM3-203ENST00000479294 USP19O94966 1318 aa31.97■■■□□ 2.71
SRRM3-203ENST00000479294 KIAA0232Q92628 1395 aa31.96■■■□□ 2.71
SRRM3-203ENST00000479294 SSH2Q76I76 1423 aa31.96■■■□□ 2.71
SRRM3-203ENST00000479294 PUS7Q96PZ0 661 aaKnown RBP31.96■■■□□ 2.71
SRRM3-203ENST00000479294 CCDC9Q9Y3X0 531 aaKnown RBP31.96■■■□□ 2.71
SRRM3-203ENST00000479294 ZC3H6P61129 1189 aaKnown RBP31.95■■■□□ 2.71
SRRM3-203ENST00000479294 NLRP6P59044 892 aa31.94■■■□□ 2.7
SRRM3-203ENST00000479294 UPF1Q92900 1129 aaKnown RBP eCLIP31.94■■■□□ 2.7
SRRM3-203ENST00000479294 CPSF1Q10570 1443 aaKnown RBP31.93■■■□□ 2.7
SRRM3-203ENST00000479294 CRYBG1Q9Y4K1 1723 aa31.93■■■□□ 2.7
SRRM3-203ENST00000479294 NWD2Q9ULI1 1742 aa31.92■■■□□ 2.7
SRRM3-203ENST00000479294 TMC1Q8TDI8 760 aa31.92■■■□□ 2.7
SRRM3-203ENST00000479294 TTC21BQ7Z4L5 1316 aa31.92■■■□□ 2.7
SRRM3-203ENST00000479294 GCP02774 474 aa31.91■■■□□ 2.7
SRRM3-203ENST00000479294 CHRNA2Q15822 529 aa31.91■■■□□ 2.7
SRRM3-203ENST00000479294 PLCH1Q4KWH8 1693 aa31.91■■■□□ 2.7
SRRM3-203ENST00000479294 USP47Q96K76 1375 aa31.91■■■□□ 2.7
SRRM3-203ENST00000479294 COL14A1Q05707 1796 aaKnown RBP31.91■■■□□ 2.7
SRRM3-203ENST00000479294 KTN1Q86UP2 1357 aaKnown RBP31.9■■■□□ 2.7
SRRM3-203ENST00000479294 SLC12A5Q9H2X9 1139 aa31.88■■■□□ 2.69
SRRM3-203ENST00000479294 TTC21AQ8NDW8 1320 aa31.88■■■□□ 2.69
SRRM3-203ENST00000479294 CPDO75976 1380 aa31.88■■■□□ 2.69
SRRM3-203ENST00000479294 GLI3P10071 1580 aa31.88■■■□□ 2.69
SRRM3-203ENST00000479294 PHRF1Q9P1Y6 1649 aaKnown RBP31.87■■■□□ 2.69
SRRM3-203ENST00000479294 ONECUT3O60422 494 aaPredicted RBP31.86■■■□□ 2.69
SRRM3-203ENST00000479294 HDGFL2Q7Z4V5 671 aaPredicted RBP31.86■■■□□ 2.69
SRRM3-203ENST00000479294 SEPT12Q8IYM1 358 aa31.84■■■□□ 2.69
SRRM3-203ENST00000479294 NRKQ7Z2Y5 1582 aa31.84■■■□□ 2.69
SRRM3-203ENST00000479294 TERF2IPQ9NYB0 399 aa31.83■■■□□ 2.69
SRRM3-203ENST00000479294 TMF1P82094 1093 aa31.82■■■□□ 2.68
SRRM3-203ENST00000479294 SPATA31A5Q5VU36 1347 aa31.81■■■□□ 2.68
SRRM3-203ENST00000479294 SPATA31A7Q8IWB4 1347 aa31.81■■■□□ 2.68
SRRM3-203ENST00000479294 CD163L1Q9NR16 1453 aa31.81■■■□□ 2.68
SRRM3-203ENST00000479294 STRN4Q9NRL3 753 aa31.81■■■□□ 2.68
SRRM3-203ENST00000479294 NRAPQ86VF7 1730 aa31.8■■■□□ 2.68
SRRM3-203ENST00000479294 EVA1CP58658 441 aa31.8■■■□□ 2.68
SRRM3-203ENST00000479294 NINLQ9Y2I6 1382 aa31.8■■■□□ 2.68
SRRM3-203ENST00000479294 SUGP2Q8IX01 1082 aaKnown RBP eCLIP31.79■■■□□ 2.68
SRRM3-203ENST00000479294 FAM98CQ17RN3 349 aaKnown RBP31.78■■■□□ 2.68
SRRM3-203ENST00000479294 KCNH5Q8NCM2 988 aa31.78■■■□□ 2.68
SRRM3-203ENST00000479294 SLIT3O75094 1523 aa31.78■■■□□ 2.68
SRRM3-203ENST00000479294 AKAP12Q02952 1782 aa31.77■■■□□ 2.68
SRRM3-203ENST00000479294 PIK3C2AO00443 1686 aa31.76■■■□□ 2.68
SRRM3-203ENST00000479294 A0A0G2JS52 829 aa31.75■■■□□ 2.67
SRRM3-203ENST00000479294 ZBTB7CA1YPR0 619 aa31.75■■■□□ 2.67
SRRM3-203ENST00000479294 MYT1Q01538 1121 aa31.75■■■□□ 2.67
SRRM3-203ENST00000479294 A0A1W2PP64 1363 aa31.75■■■□□ 2.67
SRRM3-203ENST00000479294 SPATA31A1Q5TZJ5 1347 aa31.75■■■□□ 2.67
SRRM3-203ENST00000479294 CDCA8Q53HL2 280 aa31.74■■■□□ 2.67
SRRM3-203ENST00000479294 EDC4Q6P2E9 1401 aaKnown RBP31.73■■■□□ 2.67
SRRM3-203ENST00000479294 CAMTA1Q9Y6Y1 1673 aa31.73■■■□□ 2.67
SRRM3-203ENST00000479294 AATKQ6ZMQ8 1374 aa31.72■■■□□ 2.67
SRRM3-203ENST00000479294 USP31Q70CQ4 1352 aa31.72■■■□□ 2.67
SRRM3-203ENST00000479294 NME9Q86XW9 330 aa31.72■■■□□ 2.67
SRRM3-203ENST00000479294 KRT27Q7Z3Y8 459 aa31.71■■■□□ 2.67
SRRM3-203ENST00000479294 MON2Q7Z3U7 1717 aa31.7■■■□□ 2.67
SRRM3-203ENST00000479294 SOX12O15370 315 aa31.7■■■□□ 2.67
SRRM3-203ENST00000479294 LARP1Q6PKG0 1096 aaKnown RBP31.7■■■□□ 2.67
SRRM3-203ENST00000479294 ARHGEF25Q86VW2 580 aa31.7■■■□□ 2.67
SRRM3-203ENST00000479294 ZRANB1Q9UGI0 708 aa31.7■■■□□ 2.67
SRRM3-203ENST00000479294 LMO7Q8WWI1 1683 aa31.67■■■□□ 2.66
SRRM3-203ENST00000479294 CCDC125Q86Z20 511 aa31.67■■■□□ 2.66
SRRM3-203ENST00000479294 USP35Q9P2H5 1018 aa31.67■■■□□ 2.66
SRRM3-203ENST00000479294 ANKRD36BQ8N2N9 1353 aa31.65■■■□□ 2.66
SRRM3-203ENST00000479294 COL5A2P05997 1499 aaPredicted RBP31.65■■■□□ 2.66
SRRM3-203ENST00000479294 BARGINQ6ZT62 677 aa31.63■■■□□ 2.65
SRRM3-203ENST00000479294 TCP11L2Q8N4U5 519 aa31.63■■■□□ 2.65
SRRM3-203ENST00000479294 AXIN2Q9Y2T1 843 aa31.63■■■□□ 2.65
SRRM3-203ENST00000479294 EIF4G2P78344 907 aaKnown RBP eCLIP31.62■■■□□ 2.65
SRRM3-203ENST00000479294 THRAP3Q9Y2W1 955 aaKnown RBP31.61■■■□□ 2.65
SRRM3-203ENST00000479294 NFAT5O94916 1531 aa31.59■■■□□ 2.65
SRRM3-203ENST00000479294 EP400Q96L91 3159 aa31.59■■■□□ 2.65
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms