RNA–Protein interactions for RNA: ENST00000478743.1

HDAC8-217, Transcript of histone deacetylase 8, humanhuman

TSL 4

Gene HDAC8, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-217ENST00000478743 LOC105371045A0A1W2PR82 267 aa18.99■□□□□ 0.63
HDAC8-217ENST00000478743 VGFO15240 615 aaPredicted RBP18.99■□□□□ 0.63
HDAC8-217ENST00000478743 PHF8Q9UPP1 1060 aa18.99■□□□□ 0.63
HDAC8-217ENST00000478743 FAM196AQ6ZSG2 479 aa18.98■□□□□ 0.63
HDAC8-217ENST00000478743 ANO8Q9HCE9 1232 aaPredicted RBP18.98■□□□□ 0.63
HDAC8-217ENST00000478743 NBPF8Q3BBV2 869 aa18.97■□□□□ 0.63
HDAC8-217ENST00000478743 NBPF14Q5TI25 921 aa18.97■□□□□ 0.63
HDAC8-217ENST00000478743 SPATA31A1Q5TZJ5 1347 aa18.96■□□□□ 0.63
HDAC8-217ENST00000478743 PSME1Q06323 249 aa18.95■□□□□ 0.62
HDAC8-217ENST00000478743 ADGRF5Q8IZF2 1346 aa18.94■□□□□ 0.62
HDAC8-217ENST00000478743 RGPD3A6NKT7 1758 aaPredicted RBP18.93■□□□□ 0.62
HDAC8-217ENST00000478743 RGPD4Q7Z3J3 1758 aa18.93■□□□□ 0.62
HDAC8-217ENST00000478743 PTGER2P43116 358 aa18.92■□□□□ 0.62
HDAC8-217ENST00000478743 APLP2Q06481 763 aa18.92■□□□□ 0.62
HDAC8-217ENST00000478743 TMEM132EQ6IEE7 984 aa18.92■□□□□ 0.62
HDAC8-217ENST00000478743 PHRF1Q9P1Y6 1649 aaKnown RBP18.92■□□□□ 0.62
HDAC8-217ENST00000478743 ZBTB7AO95365 584 aa18.91■□□□□ 0.62
HDAC8-217ENST00000478743 PMFBP1Q8TBY8 1022 aa18.91■□□□□ 0.62
HDAC8-217ENST00000478743 ABCC11Q96J66 1382 aa18.91■□□□□ 0.62
HDAC8-217ENST00000478743 SHANK3Q9BYB0 1731 aa18.91■□□□□ 0.62
HDAC8-217ENST00000478743 PEAK1Q9H792 1746 aa18.9■□□□□ 0.62
HDAC8-217ENST00000478743 SBF2Q86WG5 1849 aa18.9■□□□□ 0.62
HDAC8-217ENST00000478743 FHDC1Q9C0D6 1143 aaPredicted RBP18.88■□□□□ 0.61
HDAC8-217ENST00000478743 CHRNA2Q15822 529 aa18.87■□□□□ 0.61
HDAC8-217ENST00000478743 RPGRIP1LQ68CZ1 1315 aa18.87■□□□□ 0.61
HDAC8-217ENST00000478743 YTHDC2Q9H6S0 1430 aaKnown RBP18.87■□□□□ 0.61
HDAC8-217ENST00000478743 STRN4Q9NRL3 753 aa18.87■□□□□ 0.61
HDAC8-217ENST00000478743 GIGYF1O75420 1035 aaPredicted RBP18.86■□□□□ 0.61
HDAC8-217ENST00000478743 ITGAEP38570 1179 aa18.86■□□□□ 0.61
HDAC8-217ENST00000478743 SYT17Q9BSW7 474 aa18.86■□□□□ 0.61
HDAC8-217ENST00000478743 PRDM11Q9NQV5 511 aa18.86■□□□□ 0.61
HDAC8-217ENST00000478743 USP35Q9P2H5 1018 aa18.86■□□□□ 0.61
HDAC8-217ENST00000478743 ATF5Q9Y2D1 282 aaPredicted RBP18.86■□□□□ 0.61
HDAC8-217ENST00000478743 PARP4Q9UKK3 1724 aaKnown RBP18.86■□□□□ 0.61
HDAC8-217ENST00000478743 DLC1Q96QB1 1528 aa18.85■□□□□ 0.61
HDAC8-217ENST00000478743 KIAA0232Q92628 1395 aa18.85■□□□□ 0.61
HDAC8-217ENST00000478743 PTF1AQ7RTS3 328 aa18.84■□□□□ 0.61
HDAC8-217ENST00000478743 PDE3BQ13370 1112 aa18.82■□□□□ 0.6
HDAC8-217ENST00000478743 SSH2Q76I76 1423 aa18.82■□□□□ 0.6
HDAC8-217ENST00000478743 SAFB2Q14151 953 aaKnown RBP eCLIP18.81■□□□□ 0.6
HDAC8-217ENST00000478743 PIK3C2GO75747 1445 aa18.81■□□□□ 0.6
HDAC8-217ENST00000478743 LRRC37A3O60309 1634 aa18.81■□□□□ 0.6
HDAC8-217ENST00000478743 LMO7Q8WWI1 1683 aa18.8■□□□□ 0.6
HDAC8-217ENST00000478743 ANKARQ7Z5J8 1434 aa18.8■□□□□ 0.6
HDAC8-217ENST00000478743 ACIN1Q9UKV3 1341 aaKnown RBP18.79■□□□□ 0.6
HDAC8-217ENST00000478743 SGIP1Q9BQI5 828 aa18.79■□□□□ 0.6
HDAC8-217ENST00000478743 BARGINQ6ZT62 677 aa18.78■□□□□ 0.6
HDAC8-217ENST00000478743 PRR36Q9H6K5 1346 aa18.77■□□□□ 0.6
HDAC8-217ENST00000478743 PROM2Q8N271 834 aa18.77■□□□□ 0.6
HDAC8-217ENST00000478743 GOLGB1Q14789 3259 aaKnown RBP18.76■□□□□ 0.59
HDAC8-217ENST00000478743 LARP1Q6PKG0 1096 aaKnown RBP18.76■□□□□ 0.59
HDAC8-217ENST00000478743 SPATA31E1Q6ZUB1 1445 aa18.74■□□□□ 0.59
HDAC8-217ENST00000478743 ZC3H6P61129 1189 aaKnown RBP18.74■□□□□ 0.59
HDAC8-217ENST00000478743 OVOS2A0A0G2JMS6 1433 aa18.74■□□□□ 0.59
HDAC8-217ENST00000478743 OVOS2A0A0J9YW53 1432 aa18.74■□□□□ 0.59
HDAC8-217ENST00000478743 OVOS2Q6IE36 1432 aa18.74■□□□□ 0.59
HDAC8-217ENST00000478743 GPRASP1Q5JY77 1395 aa18.73■□□□□ 0.59
HDAC8-217ENST00000478743 WNK3Q9BYP7 1800 aa18.73■□□□□ 0.59
HDAC8-217ENST00000478743 PRAM1Q96QH2 718 aa18.73■□□□□ 0.59
HDAC8-217ENST00000478743 BCL11BQ9C0K0 894 aaPredicted RBP18.73■□□□□ 0.59
HDAC8-217ENST00000478743 PLSCR1O15162 318 aa18.72■□□□□ 0.59
HDAC8-217ENST00000478743 ATP7BP35670 1465 aa18.71■□□□□ 0.59
HDAC8-217ENST00000478743 TULP4Q9NRJ4 1543 aa18.71■□□□□ 0.59
HDAC8-217ENST00000478743 PAK3O75914 559 aaPredicted RBP18.71■□□□□ 0.59
HDAC8-217ENST00000478743 RGL3Q3MIN7 710 aa18.71■□□□□ 0.59
HDAC8-217ENST00000478743 TCP11L2Q8N4U5 519 aa18.71■□□□□ 0.59
HDAC8-217ENST00000478743 SIRT1Q96EB6 747 aa18.7■□□□□ 0.58
HDAC8-217ENST00000478743 NUTM2GQ5VZR2 741 aa18.69■□□□□ 0.58
HDAC8-217ENST00000478743 HIRIP3Q9BW71 556 aaPredicted RBP18.69■□□□□ 0.58
HDAC8-217ENST00000478743 PAPPAQ13219 1627 aa18.69■□□□□ 0.58
HDAC8-217ENST00000478743 MAP3K5Q99683 1374 aa18.68■□□□□ 0.58
HDAC8-217ENST00000478743 AKAP12Q02952 1782 aa18.68■□□□□ 0.58
HDAC8-217ENST00000478743 GPR162Q16538 588 aa18.67■□□□□ 0.58
HDAC8-217ENST00000478743 MTFR1LQ9H019 292 aa18.67■□□□□ 0.58
HDAC8-217ENST00000478743 ANKRD30BQ9BXX2 1392 aa18.67■□□□□ 0.58
HDAC8-217ENST00000478743 EVA1CP58658 441 aa18.66■□□□□ 0.58
HDAC8-217ENST00000478743 ARXQ96QS3 562 aa18.66■□□□□ 0.58
HDAC8-217ENST00000478743 DHX57Q6P158 1386 aaKnown RBP18.66■□□□□ 0.58
HDAC8-217ENST00000478743 COL5A2P05997 1499 aaPredicted RBP18.65■□□□□ 0.58
HDAC8-217ENST00000478743 SLC15A2Q16348 729 aa18.65■□□□□ 0.58
HDAC8-217ENST00000478743 TOPAZ1Q8N9V7 1692 aa18.64■□□□□ 0.57
HDAC8-217ENST00000478743 ITSN1Q15811 1721 aa18.64■□□□□ 0.57
HDAC8-217ENST00000478743 CFAP70Q5T0N1 1121 aa18.64■□□□□ 0.57
HDAC8-217ENST00000478743 STK32BQ9NY57 414 aa18.64■□□□□ 0.57
HDAC8-217ENST00000478743 TXNRD1Q16881 649 aa18.62■□□□□ 0.57
HDAC8-217ENST00000478743 PELP1Q8IZL8 1130 aaKnown RBP18.62■□□□□ 0.57
HDAC8-217ENST00000478743 MINK1Q8N4C8 1332 aaPredicted RBP18.62■□□□□ 0.57
HDAC8-217ENST00000478743 ATP10DQ9P241 1426 aa18.62■□□□□ 0.57
HDAC8-217ENST00000478743 COL24A1Q17RW2 1714 aa18.62■□□□□ 0.57
HDAC8-217ENST00000478743 NGDNQ8NEJ9 315 aaKnown RBP18.61■□□□□ 0.57
HDAC8-217ENST00000478743 C14orf93Q9H972 538 aaKnown RBP18.61■□□□□ 0.57
HDAC8-217ENST00000478743 ADGRB1O14514 1584 aa18.6■□□□□ 0.57
HDAC8-217ENST00000478743 HSPA6P17066 643 aa18.6■□□□□ 0.57
HDAC8-217ENST00000478743 SLC4A1APQ9BWU0 796 aaKnown RBP18.6■□□□□ 0.57
HDAC8-217ENST00000478743 NLGN2Q8NFZ4 835 aa18.59■□□□□ 0.57
HDAC8-217ENST00000478743 THRAP3Q9Y2W1 955 aaKnown RBP18.59■□□□□ 0.57
HDAC8-217ENST00000478743 CRB1P82279 1406 aa18.58■□□□□ 0.57
HDAC8-217ENST00000478743 TUBGCP6Q96RT7 1819 aa18.58■□□□□ 0.57
HDAC8-217ENST00000478743 CPDO75976 1380 aa18.58■□□□□ 0.57
HDAC8-217ENST00000478743 KLHL34Q8N239 644 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms