RNA–Protein interactions for RNA: ENST00000478708.2

PDPK1-211, Transcript of 3-phosphoinositide dependent protein kinase 1, humanhuman

TSL 5

Gene PDPK1, Length 445 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPK1-211ENST00000478708 ACEP12821 1306 aa27.35■■□□□ 1.97
PDPK1-211ENST00000478708 POLR3AO14802 1390 aaPredicted RBP27.35■■□□□ 1.97
PDPK1-211ENST00000478708 PRDM11Q9NQV5 511 aa27.34■■□□□ 1.97
PDPK1-211ENST00000478708 FAM83GA6ND36 823 aa27.33■■□□□ 1.97
PDPK1-211ENST00000478708 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.32■■□□□ 1.96
PDPK1-211ENST00000478708 RALGAPBQ86X10 1494 aa27.32■■□□□ 1.96
PDPK1-211ENST00000478708 ABTB2Q8N961 1025 aa27.31■■□□□ 1.96
PDPK1-211ENST00000478708 BTG4Q9NY30 223 aa27.31■■□□□ 1.96
PDPK1-211ENST00000478708 A0A0G2JS52 829 aa27.3■■□□□ 1.96
PDPK1-211ENST00000478708 MYT1Q01538 1121 aa27.3■■□□□ 1.96
PDPK1-211ENST00000478708 TONSLQ96HA7 1378 aa27.3■■□□□ 1.96
PDPK1-211ENST00000478708 SF3B2Q13435 895 aaKnown RBP27.29■■□□□ 1.96
PDPK1-211ENST00000478708 NLRP13Q86W25 1043 aa27.29■■□□□ 1.96
PDPK1-211ENST00000478708 PPIP5K1Q6PFW1 1433 aa27.27■■□□□ 1.96
PDPK1-211ENST00000478708 CABP2Q9NPB3 220 aa27.27■■□□□ 1.96
PDPK1-211ENST00000478708 ONECUT3O60422 494 aaPredicted RBP27.26■■□□□ 1.95
PDPK1-211ENST00000478708 SEPT12Q8IYM1 358 aa27.26■■□□□ 1.95
PDPK1-211ENST00000478708 NWD2Q9ULI1 1742 aa27.26■■□□□ 1.95
PDPK1-211ENST00000478708 TRPM3Q9HCF6 1732 aaPredicted RBP27.25■■□□□ 1.95
PDPK1-211ENST00000478708 SLC24A1O60721 1099 aa27.25■■□□□ 1.95
PDPK1-211ENST00000478708 ZNF692Q9BU19 519 aaPredicted RBP27.25■■□□□ 1.95
PDPK1-211ENST00000478708 ALS2Q96Q42 1657 aa27.23■■□□□ 1.95
PDPK1-211ENST00000478708 EVA1CP58658 441 aa27.22■■□□□ 1.95
PDPK1-211ENST00000478708 CARD11Q9BXL7 1154 aa27.22■■□□□ 1.95
PDPK1-211ENST00000478708 KRT27Q7Z3Y8 459 aa27.21■■□□□ 1.95
PDPK1-211ENST00000478708 CABP1Q9NZU7 370 aa27.21■■□□□ 1.95
PDPK1-211ENST00000478708 COL14A1Q05707 1796 aaKnown RBP27.21■■□□□ 1.95
PDPK1-211ENST00000478708 KIAA0232Q92628 1395 aa27.19■■□□□ 1.94
PDPK1-211ENST00000478708 NUTM2GQ5VZR2 741 aa27.18■■□□□ 1.94
PDPK1-211ENST00000478708 ZC3H6P61129 1189 aaKnown RBP27.17■■□□□ 1.94
PDPK1-211ENST00000478708 ZRANB1Q9UGI0 708 aa27.17■■□□□ 1.94
PDPK1-211ENST00000478708 BLMP54132 1417 aaPredicted RBP27.16■■□□□ 1.94
PDPK1-211ENST00000478708 ABCA3Q99758 1704 aa27.16■■□□□ 1.94
PDPK1-211ENST00000478708 FAM98CQ17RN3 349 aaKnown RBP27.16■■□□□ 1.94
PDPK1-211ENST00000478708 GLI3P10071 1580 aa27.16■■□□□ 1.94
PDPK1-211ENST00000478708 PLCH1Q4KWH8 1693 aa27.16■■□□□ 1.94
PDPK1-211ENST00000478708 TRPM1Q7Z4N2 1603 aa27.16■■□□□ 1.94
PDPK1-211ENST00000478708 SPATA31A5Q5VU36 1347 aa27.16■■□□□ 1.94
PDPK1-211ENST00000478708 SPATA31A7Q8IWB4 1347 aa27.16■■□□□ 1.94
PDPK1-211ENST00000478708 TOPAZ1Q8N9V7 1692 aa27.14■■□□□ 1.94
PDPK1-211ENST00000478708 QRICH2Q9H0J4 1663 aa27.14■■□□□ 1.94
PDPK1-211ENST00000478708 CPDO75976 1380 aa27.14■■□□□ 1.94
PDPK1-211ENST00000478708 NLRP6P59044 892 aa27.14■■□□□ 1.94
PDPK1-211ENST00000478708 SBNO2Q9Y2G9 1366 aa27.13■■□□□ 1.93
PDPK1-211ENST00000478708 GCP02774 474 aa27.13■■□□□ 1.93
PDPK1-211ENST00000478708 STRN4Q9NRL3 753 aa27.13■■□□□ 1.93
PDPK1-211ENST00000478708 USP19O94966 1318 aa27.13■■□□□ 1.93
PDPK1-211ENST00000478708 USP6P35125 1406 aa27.12■■□□□ 1.93
PDPK1-211ENST00000478708 CHRNA2Q15822 529 aa27.11■■□□□ 1.93
PDPK1-211ENST00000478708 KCNH5Q8NCM2 988 aa27.11■■□□□ 1.93
PDPK1-211ENST00000478708 TTC21AQ8NDW8 1320 aa27.1■■□□□ 1.93
PDPK1-211ENST00000478708 THRAP3Q9Y2W1 955 aaKnown RBP27.08■■□□□ 1.93
PDPK1-211ENST00000478708 SPATA31A1Q5TZJ5 1347 aa27.08■■□□□ 1.93
PDPK1-211ENST00000478708 BAG6P46379 1132 aa27.07■■□□□ 1.92
PDPK1-211ENST00000478708 PUS7Q96PZ0 661 aaKnown RBP27.07■■□□□ 1.92
PDPK1-211ENST00000478708 C11orf95C9JLR9 678 aaPredicted RBP27.06■■□□□ 1.92
PDPK1-211ENST00000478708 BARGINQ6ZT62 677 aa27.05■■□□□ 1.92
PDPK1-211ENST00000478708 HDGFL2Q7Z4V5 671 aaPredicted RBP27.05■■□□□ 1.92
PDPK1-211ENST00000478708 TCP11L2Q8N4U5 519 aa27.04■■□□□ 1.92
PDPK1-211ENST00000478708 PDE3BQ13370 1112 aa27.03■■□□□ 1.92
PDPK1-211ENST00000478708 TERF2IPQ9NYB0 399 aa27.03■■□□□ 1.92
PDPK1-211ENST00000478708 NRAPQ86VF7 1730 aa27.02■■□□□ 1.92
PDPK1-211ENST00000478708 KTN1Q86UP2 1357 aaKnown RBP27.02■■□□□ 1.92
PDPK1-211ENST00000478708 TTC21BQ7Z4L5 1316 aa27.02■■□□□ 1.92
PDPK1-211ENST00000478708 USP35Q9P2H5 1018 aa27.02■■□□□ 1.92
PDPK1-211ENST00000478708 SSH2Q76I76 1423 aa27.01■■□□□ 1.91
PDPK1-211ENST00000478708 FAM196AQ6ZSG2 479 aa27.01■■□□□ 1.91
PDPK1-211ENST00000478708 TMC1Q8TDI8 760 aa27.01■■□□□ 1.91
PDPK1-211ENST00000478708 PHRF1Q9P1Y6 1649 aaKnown RBP27.01■■□□□ 1.91
PDPK1-211ENST00000478708 AATKQ6ZMQ8 1374 aa27■■□□□ 1.91
PDPK1-211ENST00000478708 CRYBG1Q9Y4K1 1723 aa27■■□□□ 1.91
PDPK1-211ENST00000478708 ZBTB7CA1YPR0 619 aa27■■□□□ 1.91
PDPK1-211ENST00000478708 TIMELESSQ9UNS1 1208 aa27■■□□□ 1.91
PDPK1-211ENST00000478708 NRKQ7Z2Y5 1582 aa26.97■■□□□ 1.91
PDPK1-211ENST00000478708 CLSPNQ9HAW4 1339 aa26.97■■□□□ 1.91
PDPK1-211ENST00000478708 NINLQ9Y2I6 1382 aa26.97■■□□□ 1.91
PDPK1-211ENST00000478708 LARP1Q6PKG0 1096 aaKnown RBP26.96■■□□□ 1.91
PDPK1-211ENST00000478708 CDCA7Q9BWT1 371 aaPredicted RBP26.95■■□□□ 1.9
PDPK1-211ENST00000478708 CPSF1Q10570 1443 aaKnown RBP26.95■■□□□ 1.9
PDPK1-211ENST00000478708 TOM1L2Q6ZVM7 507 aa26.94■■□□□ 1.9
PDPK1-211ENST00000478708 CDCA8Q53HL2 280 aa26.93■■□□□ 1.9
PDPK1-211ENST00000478708 CRB1P82279 1406 aa26.92■■□□□ 1.9
PDPK1-211ENST00000478708 SLIT3O75094 1523 aa26.91■■□□□ 1.9
PDPK1-211ENST00000478708 CSB-PGBD3P0DP91 1061 aa26.91■■□□□ 1.9
PDPK1-211ENST00000478708 DEFB132Q7Z7B7 95 aa26.91■■□□□ 1.9
PDPK1-211ENST00000478708 CAMTA1Q9Y6Y1 1673 aa26.91■■□□□ 1.9
PDPK1-211ENST00000478708 COL5A2P05997 1499 aaPredicted RBP26.9■■□□□ 1.9
PDPK1-211ENST00000478708 ARHGEF25Q86VW2 580 aa26.9■■□□□ 1.9
PDPK1-211ENST00000478708 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.89■■□□□ 1.9
PDPK1-211ENST00000478708 BRWD3Q6RI45 1802 aa26.88■■□□□ 1.89
PDPK1-211ENST00000478708 ST20-MTHFSA0A0A6YYL1 179 aa26.88■■□□□ 1.89
PDPK1-211ENST00000478708 TMF1P82094 1093 aa26.88■■□□□ 1.89
PDPK1-211ENST00000478708 THSD7AQ9UPZ6 1657 aa26.87■■□□□ 1.89
PDPK1-211ENST00000478708 EP400Q96L91 3159 aa26.87■■□□□ 1.89
PDPK1-211ENST00000478708 WDR17Q8IZU2 1322 aa26.87■■□□□ 1.89
PDPK1-211ENST00000478708 SOX12O15370 315 aa26.86■■□□□ 1.89
PDPK1-211ENST00000478708 EDC4Q6P2E9 1401 aaKnown RBP26.86■■□□□ 1.89
PDPK1-211ENST00000478708 SLC12A5Q9H2X9 1139 aa26.86■■□□□ 1.89
PDPK1-211ENST00000478708 USP31Q70CQ4 1352 aa26.85■■□□□ 1.89
PDPK1-211ENST00000478708 PARD3Q8TEW0 1356 aa26.84■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms