RNA–Protein interactions for RNA: ENST00000478702.5

GARNL3-215, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-215ENST00000478702 TNS1Q9HBL0 1735 aaKnown RBP22.96■■□□□ 1.27
GARNL3-215ENST00000478702 TRIM26Q12899 539 aaPredicted RBP22.95■■□□□ 1.26
GARNL3-215ENST00000478702 MINK1Q8N4C8 1332 aaPredicted RBP22.95■■□□□ 1.26
GARNL3-215ENST00000478702 BTG4Q9NY30 223 aa22.95■■□□□ 1.26
GARNL3-215ENST00000478702 PHRF1Q9P1Y6 1649 aaKnown RBP22.94■■□□□ 1.26
GARNL3-215ENST00000478702 FAM98CQ17RN3 349 aaKnown RBP22.94■■□□□ 1.26
GARNL3-215ENST00000478702 DCAF11Q8TEB1 546 aa22.94■■□□□ 1.26
GARNL3-215ENST00000478702 STAC3Q96MF2 364 aa22.94■■□□□ 1.26
GARNL3-215ENST00000478702 GPRASP1Q5JY77 1395 aa22.92■■□□□ 1.26
GARNL3-215ENST00000478702 EIF3AQ14152 1382 aaKnown RBP22.91■■□□□ 1.26
GARNL3-215ENST00000478702 WASLO00401 505 aaPredicted RBP22.91■■□□□ 1.26
GARNL3-215ENST00000478702 TOPAZ1Q8N9V7 1692 aa22.9■■□□□ 1.26
GARNL3-215ENST00000478702 A0A0G2JS52 829 aa22.89■■□□□ 1.25
GARNL3-215ENST00000478702 MYT1Q01538 1121 aa22.89■■□□□ 1.25
GARNL3-215ENST00000478702 KDM2AQ9Y2K7 1162 aa22.89■■□□□ 1.25
GARNL3-215ENST00000478702 ATP7BP35670 1465 aa22.89■■□□□ 1.25
GARNL3-215ENST00000478702 SPATA31A5Q5VU36 1347 aa22.88■■□□□ 1.25
GARNL3-215ENST00000478702 SPATA31A7Q8IWB4 1347 aa22.88■■□□□ 1.25
GARNL3-215ENST00000478702 BAG6P46379 1132 aa22.87■■□□□ 1.25
GARNL3-215ENST00000478702 FAM182BQ5T319 152 aa22.87■■□□□ 1.25
GARNL3-215ENST00000478702 PSDA5PKW4 1024 aaPredicted RBP22.86■■□□□ 1.25
GARNL3-215ENST00000478702 NGDNQ8NEJ9 315 aaKnown RBP22.85■■□□□ 1.25
GARNL3-215ENST00000478702 TRPM1Q7Z4N2 1603 aa22.84■■□□□ 1.25
GARNL3-215ENST00000478702 PAK3O75914 559 aaPredicted RBP22.83■■□□□ 1.25
GARNL3-215ENST00000478702 EN1Q05925 392 aaPredicted RBP22.83■■□□□ 1.25
GARNL3-215ENST00000478702 DISP2A7MBM2 1401 aa22.82■■□□□ 1.24
GARNL3-215ENST00000478702 KIAA0232Q92628 1395 aa22.81■■□□□ 1.24
GARNL3-215ENST00000478702 PRDM11Q9NQV5 511 aa22.81■■□□□ 1.24
GARNL3-215ENST00000478702 NUDT16Q96DE0 195 aaKnown RBP22.8■■□□□ 1.24
GARNL3-215ENST00000478702 NRKQ7Z2Y5 1582 aa22.8■■□□□ 1.24
GARNL3-215ENST00000478702 SPATA31A1Q5TZJ5 1347 aa22.79■■□□□ 1.24
GARNL3-215ENST00000478702 RREB1Q92766 1687 aa22.78■■□□□ 1.24
GARNL3-215ENST00000478702 CHRNA2Q15822 529 aa22.78■■□□□ 1.24
GARNL3-215ENST00000478702 SIN3AQ96ST3 1273 aa22.78■■□□□ 1.24
GARNL3-215ENST00000478702 LMO7Q8WWI1 1683 aa22.77■■□□□ 1.24
GARNL3-215ENST00000478702 POLR3AO14802 1390 aaPredicted RBP22.76■■□□□ 1.23
GARNL3-215ENST00000478702 NUP188Q5SRE5 1749 aa22.75■■□□□ 1.23
GARNL3-215ENST00000478702 CAMTA1Q9Y6Y1 1673 aa22.74■■□□□ 1.23
GARNL3-215ENST00000478702 ZC3H6P61129 1189 aaKnown RBP22.74■■□□□ 1.23
GARNL3-215ENST00000478702 EZH2Q15910 746 aaKnown RBP22.74■■□□□ 1.23
GARNL3-215ENST00000478702 NUTM2GQ5VZR2 741 aa22.74■■□□□ 1.23
GARNL3-215ENST00000478702 L3MBTL2Q969R5 705 aa22.74■■□□□ 1.23
GARNL3-215ENST00000478702 CDK19Q9BWU1 502 aa22.74■■□□□ 1.23
GARNL3-215ENST00000478702 QRICH2Q9H0J4 1663 aa22.74■■□□□ 1.23
GARNL3-215ENST00000478702 R3HDM1Q15032 1099 aaKnown RBP22.73■■□□□ 1.23
GARNL3-215ENST00000478702 STRN4Q9NRL3 753 aa22.73■■□□□ 1.23
GARNL3-215ENST00000478702 ACEP12821 1306 aa22.72■■□□□ 1.23
GARNL3-215ENST00000478702 SSH2Q76I76 1423 aa22.72■■□□□ 1.23
GARNL3-215ENST00000478702 CAMKK2Q96RR4 588 aa22.71■■□□□ 1.23
GARNL3-215ENST00000478702 TRIM37O94972 964 aa22.7■■□□□ 1.22
GARNL3-215ENST00000478702 NEUROD1Q13562 356 aa22.7■■□□□ 1.22
GARNL3-215ENST00000478702 NBPF8Q3BBV2 869 aa22.7■■□□□ 1.22
GARNL3-215ENST00000478702 PARP4Q9UKK3 1724 aaKnown RBP22.7■■□□□ 1.22
GARNL3-215ENST00000478702 PLEKHG3A1L390 1219 aa22.69■■□□□ 1.22
GARNL3-215ENST00000478702 FAM196AQ6ZSG2 479 aa22.69■■□□□ 1.22
GARNL3-215ENST00000478702 CCDC61Q9Y6R9 512 aa22.69■■□□□ 1.22
GARNL3-215ENST00000478702 USP35Q9P2H5 1018 aa22.68■■□□□ 1.22
GARNL3-215ENST00000478702 SBF2Q86WG5 1849 aa22.68■■□□□ 1.22
GARNL3-215ENST00000478702 NBPF1Q3BBV0 1214 aa22.67■■□□□ 1.22
GARNL3-215ENST00000478702 BARGINQ6ZT62 677 aa22.67■■□□□ 1.22
GARNL3-215ENST00000478702 USP19O94966 1318 aa22.66■■□□□ 1.22
GARNL3-215ENST00000478702 CPDO75976 1380 aa22.65■■□□□ 1.22
GARNL3-215ENST00000478702 LARP1Q6PKG0 1096 aaKnown RBP22.65■■□□□ 1.22
GARNL3-215ENST00000478702 WNK3Q9BYP7 1800 aa22.64■■□□□ 1.22
GARNL3-215ENST00000478702 ABTB2Q8N961 1025 aa22.64■■□□□ 1.21
GARNL3-215ENST00000478702 PEAK1Q9H792 1746 aa22.64■■□□□ 1.21
GARNL3-215ENST00000478702 PARD3Q8TEW0 1356 aa22.63■■□□□ 1.21
GARNL3-215ENST00000478702 APBA3O96018 575 aa22.63■■□□□ 1.21
GARNL3-215ENST00000478702 EVA1CP58658 441 aa22.63■■□□□ 1.21
GARNL3-215ENST00000478702 TONSLQ96HA7 1378 aa22.63■■□□□ 1.21
GARNL3-215ENST00000478702 COL5A2P05997 1499 aaPredicted RBP22.62■■□□□ 1.21
GARNL3-215ENST00000478702 COL18A1P39060 1754 aa22.62■■□□□ 1.21
GARNL3-215ENST00000478702 PPIP5K1Q6PFW1 1433 aa22.62■■□□□ 1.21
GARNL3-215ENST00000478702 RGPD5Q99666 1765 aa22.61■■□□□ 1.21
GARNL3-215ENST00000478702 PDE3BQ13370 1112 aa22.6■■□□□ 1.21
GARNL3-215ENST00000478702 TCP11L2Q8N4U5 519 aa22.6■■□□□ 1.21
GARNL3-215ENST00000478702 ROCK2O75116 1388 aaKnown RBP22.6■■□□□ 1.21
GARNL3-215ENST00000478702 LRRC37A3O60309 1634 aa22.6■■□□□ 1.21
GARNL3-215ENST00000478702 PIK3C2AO00443 1686 aa22.59■■□□□ 1.21
GARNL3-215ENST00000478702 RGPD3A6NKT7 1758 aaPredicted RBP22.59■■□□□ 1.21
GARNL3-215ENST00000478702 RGPD4Q7Z3J3 1758 aa22.59■■□□□ 1.21
GARNL3-215ENST00000478702 SLIT3O75094 1523 aa22.58■■□□□ 1.21
GARNL3-215ENST00000478702 GCP02774 474 aa22.58■■□□□ 1.21
GARNL3-215ENST00000478702 NLRP13Q86W25 1043 aa22.57■■□□□ 1.2
GARNL3-215ENST00000478702 CABP2Q9NPB3 220 aa22.57■■□□□ 1.2
GARNL3-215ENST00000478702 CENPJQ9HC77 1338 aaPredicted RBP22.57■■□□□ 1.2
GARNL3-215ENST00000478702 SRPK2P78362 688 aaKnown RBP22.56■■□□□ 1.2
GARNL3-215ENST00000478702 THRAP3Q9Y2W1 955 aaKnown RBP22.56■■□□□ 1.2
GARNL3-215ENST00000478702 AKAP12Q02952 1782 aa22.55■■□□□ 1.2
GARNL3-215ENST00000478702 USP6P35125 1406 aa22.55■■□□□ 1.2
GARNL3-215ENST00000478702 CRB1P82279 1406 aa22.54■■□□□ 1.2
GARNL3-215ENST00000478702 BRD4O60885 1362 aaPredicted RBP22.53■■□□□ 1.2
GARNL3-215ENST00000478702 PCGF6Q9BYE7 350 aa22.52■■□□□ 1.2
GARNL3-215ENST00000478702 CASZ1Q86V15 1759 aa22.5■■□□□ 1.19
GARNL3-215ENST00000478702 AATKQ6ZMQ8 1374 aa22.5■■□□□ 1.19
GARNL3-215ENST00000478702 OVOS2A0A0G2JMS6 1433 aa22.49■■□□□ 1.19
GARNL3-215ENST00000478702 OVOS2A0A0J9YW53 1432 aa22.49■■□□□ 1.19
GARNL3-215ENST00000478702 OVOS2Q6IE36 1432 aa22.49■■□□□ 1.19
GARNL3-215ENST00000478702 NBPF14Q5TI25 921 aa22.49■■□□□ 1.19
GARNL3-215ENST00000478702 CABP1Q9NZU7 370 aa22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms