RNA–Protein interactions for RNA: ENST00000478507.1

TDP2-204, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

TSL 5

Gene TDP2, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-204ENST00000478507 ATP7BP35670 1465 aa18.85■□□□□ 0.61
TDP2-204ENST00000478507 STAC3Q96MF2 364 aa18.85■□□□□ 0.61
TDP2-204ENST00000478507 ITSN1Q15811 1721 aa18.84■□□□□ 0.61
TDP2-204ENST00000478507 SF3B2Q13435 895 aaKnown RBP18.84■□□□□ 0.61
TDP2-204ENST00000478507 FAM98CQ17RN3 349 aaKnown RBP18.84■□□□□ 0.61
TDP2-204ENST00000478507 DCAF11Q8TEB1 546 aa18.84■□□□□ 0.61
TDP2-204ENST00000478507 SPATA31A5Q5VU36 1347 aa18.83■□□□□ 0.61
TDP2-204ENST00000478507 SPATA31A7Q8IWB4 1347 aa18.83■□□□□ 0.61
TDP2-204ENST00000478507 RGPD1P0DJD0 1748 aa18.81■□□□□ 0.6
TDP2-204ENST00000478507 KDM2AQ9Y2K7 1162 aa18.81■□□□□ 0.6
TDP2-204ENST00000478507 PHRF1Q9P1Y6 1649 aaKnown RBP18.81■□□□□ 0.6
TDP2-204ENST00000478507 TOPAZ1Q8N9V7 1692 aa18.8■□□□□ 0.6
TDP2-204ENST00000478507 TNS1Q9HBL0 1735 aaKnown RBP18.8■□□□□ 0.6
TDP2-204ENST00000478507 NGDNQ8NEJ9 315 aaKnown RBP18.79■□□□□ 0.6
TDP2-204ENST00000478507 DISP2A7MBM2 1401 aa18.79■□□□□ 0.6
TDP2-204ENST00000478507 BAG6P46379 1132 aa18.78■□□□□ 0.6
TDP2-204ENST00000478507 A0A0G2JS52 829 aa18.77■□□□□ 0.6
TDP2-204ENST00000478507 HRCP23327 699 aa18.77■□□□□ 0.6
TDP2-204ENST00000478507 MYT1Q01538 1121 aa18.77■□□□□ 0.6
TDP2-204ENST00000478507 NUDT16Q96DE0 195 aaKnown RBP18.77■□□□□ 0.6
TDP2-204ENST00000478507 POLR3AO14802 1390 aaPredicted RBP18.77■□□□□ 0.6
TDP2-204ENST00000478507 KIAA0232Q92628 1395 aa18.77■□□□□ 0.6
TDP2-204ENST00000478507 FAM182BQ5T319 152 aa18.76■□□□□ 0.59
TDP2-204ENST00000478507 PRDM11Q9NQV5 511 aa18.76■□□□□ 0.59
TDP2-204ENST00000478507 SPATA31A1Q5TZJ5 1347 aa18.75■□□□□ 0.59
TDP2-204ENST00000478507 KIAA1210Q9ULL0 1709 aa18.75■□□□□ 0.59
TDP2-204ENST00000478507 PAK3O75914 559 aaPredicted RBP18.75■□□□□ 0.59
TDP2-204ENST00000478507 NRKQ7Z2Y5 1582 aa18.73■□□□□ 0.59
TDP2-204ENST00000478507 PSDA5PKW4 1024 aaPredicted RBP18.73■□□□□ 0.59
TDP2-204ENST00000478507 EN1Q05925 392 aaPredicted RBP18.73■□□□□ 0.59
TDP2-204ENST00000478507 CDK19Q9BWU1 502 aa18.72■□□□□ 0.59
TDP2-204ENST00000478507 LMO7Q8WWI1 1683 aa18.71■□□□□ 0.59
TDP2-204ENST00000478507 CHRNA2Q15822 529 aa18.71■□□□□ 0.59
TDP2-204ENST00000478507 PLEKHG3A1L390 1219 aa18.7■□□□□ 0.58
TDP2-204ENST00000478507 ACEP12821 1306 aa18.7■□□□□ 0.58
TDP2-204ENST00000478507 CAMTA1Q9Y6Y1 1673 aa18.69■□□□□ 0.58
TDP2-204ENST00000478507 SSH2Q76I76 1423 aa18.69■□□□□ 0.58
TDP2-204ENST00000478507 NBPF8Q3BBV2 869 aa18.69■□□□□ 0.58
TDP2-204ENST00000478507 CCDC61Q9Y6R9 512 aa18.69■□□□□ 0.58
TDP2-204ENST00000478507 USP19O94966 1318 aa18.69■□□□□ 0.58
TDP2-204ENST00000478507 CPDO75976 1380 aa18.68■□□□□ 0.58
TDP2-204ENST00000478507 ZC3H6P61129 1189 aaKnown RBP18.68■□□□□ 0.58
TDP2-204ENST00000478507 NUTM2GQ5VZR2 741 aa18.67■□□□□ 0.58
TDP2-204ENST00000478507 BARGINQ6ZT62 677 aa18.67■□□□□ 0.58
TDP2-204ENST00000478507 CAMKK2Q96RR4 588 aa18.67■□□□□ 0.58
TDP2-204ENST00000478507 STRN4Q9NRL3 753 aa18.67■□□□□ 0.58
TDP2-204ENST00000478507 EZH2Q15910 746 aaKnown RBP18.66■□□□□ 0.58
TDP2-204ENST00000478507 FAM196AQ6ZSG2 479 aa18.66■□□□□ 0.58
TDP2-204ENST00000478507 RREB1Q92766 1687 aa18.66■□□□□ 0.58
TDP2-204ENST00000478507 R3HDM1Q15032 1099 aaKnown RBP18.65■□□□□ 0.58
TDP2-204ENST00000478507 NBPF1Q3BBV0 1214 aa18.65■□□□□ 0.58
TDP2-204ENST00000478507 TRIM37O94972 964 aa18.64■□□□□ 0.57
TDP2-204ENST00000478507 PARD3Q8TEW0 1356 aa18.64■□□□□ 0.57
TDP2-204ENST00000478507 LARP1Q6PKG0 1096 aaKnown RBP18.63■□□□□ 0.57
TDP2-204ENST00000478507 ABTB2Q8N961 1025 aa18.62■□□□□ 0.57
TDP2-204ENST00000478507 NUP188Q5SRE5 1749 aa18.62■□□□□ 0.57
TDP2-204ENST00000478507 PARP4Q9UKK3 1724 aaKnown RBP18.62■□□□□ 0.57
TDP2-204ENST00000478507 COL5A2P05997 1499 aaPredicted RBP18.61■□□□□ 0.57
TDP2-204ENST00000478507 PPIP5K1Q6PFW1 1433 aa18.61■□□□□ 0.57
TDP2-204ENST00000478507 USP35Q9P2H5 1018 aa18.61■□□□□ 0.57
TDP2-204ENST00000478507 TCP11L2Q8N4U5 519 aa18.6■□□□□ 0.57
TDP2-204ENST00000478507 QRICH2Q9H0J4 1663 aa18.6■□□□□ 0.57
TDP2-204ENST00000478507 BRD4O60885 1362 aaPredicted RBP18.59■□□□□ 0.57
TDP2-204ENST00000478507 GCP02774 474 aa18.59■□□□□ 0.57
TDP2-204ENST00000478507 EVA1CP58658 441 aa18.59■□□□□ 0.57
TDP2-204ENST00000478507 SLIT3O75094 1523 aa18.59■□□□□ 0.57
TDP2-204ENST00000478507 PEAK1Q9H792 1746 aa18.58■□□□□ 0.57
TDP2-204ENST00000478507 CENPJQ9HC77 1338 aaPredicted RBP18.58■□□□□ 0.57
TDP2-204ENST00000478507 APBA3O96018 575 aa18.58■□□□□ 0.56
TDP2-204ENST00000478507 NLRP13Q86W25 1043 aa18.58■□□□□ 0.56
TDP2-204ENST00000478507 THRAP3Q9Y2W1 955 aaKnown RBP18.58■□□□□ 0.56
TDP2-204ENST00000478507 USP6P35125 1406 aa18.57■□□□□ 0.56
TDP2-204ENST00000478507 CABP2Q9NPB3 220 aa18.57■□□□□ 0.56
TDP2-204ENST00000478507 COL18A1P39060 1754 aa18.56■□□□□ 0.56
TDP2-204ENST00000478507 SRPK2P78362 688 aaKnown RBP18.56■□□□□ 0.56
TDP2-204ENST00000478507 PDE3BQ13370 1112 aa18.56■□□□□ 0.56
TDP2-204ENST00000478507 PIK3C2AO00443 1686 aa18.55■□□□□ 0.56
TDP2-204ENST00000478507 CRB1P82279 1406 aa18.55■□□□□ 0.56
TDP2-204ENST00000478507 AATKQ6ZMQ8 1374 aa18.55■□□□□ 0.56
TDP2-204ENST00000478507 LRRC37A3O60309 1634 aa18.54■□□□□ 0.56
TDP2-204ENST00000478507 SBF2Q86WG5 1849 aa18.53■□□□□ 0.56
TDP2-204ENST00000478507 RGPD3A6NKT7 1758 aaPredicted RBP18.53■□□□□ 0.56
TDP2-204ENST00000478507 RGPD4Q7Z3J3 1758 aa18.53■□□□□ 0.56
TDP2-204ENST00000478507 CABP1Q9NZU7 370 aa18.52■□□□□ 0.56
TDP2-204ENST00000478507 WNK3Q9BYP7 1800 aa18.51■□□□□ 0.55
TDP2-204ENST00000478507 OVOS2A0A0G2JMS6 1433 aa18.5■□□□□ 0.55
TDP2-204ENST00000478507 OVOS2A0A0J9YW53 1432 aa18.5■□□□□ 0.55
TDP2-204ENST00000478507 OVOS2Q6IE36 1432 aa18.5■□□□□ 0.55
TDP2-204ENST00000478507 TRPM1Q7Z4N2 1603 aa18.5■□□□□ 0.55
TDP2-204ENST00000478507 C11orf95C9JLR9 678 aaPredicted RBP18.49■□□□□ 0.55
TDP2-204ENST00000478507 NLRP6P59044 892 aa18.49■□□□□ 0.55
TDP2-204ENST00000478507 AKAP12Q02952 1782 aa18.48■□□□□ 0.55
TDP2-204ENST00000478507 L3MBTL2Q969R5 705 aa18.47■□□□□ 0.55
TDP2-204ENST00000478507 AXIN2Q9Y2T1 843 aa18.47■□□□□ 0.55
TDP2-204ENST00000478507 BCL9O00512 1426 aa18.47■□□□□ 0.55
TDP2-204ENST00000478507 CPSF1Q10570 1443 aaKnown RBP18.47■□□□□ 0.55
TDP2-204ENST00000478507 RGPD5Q99666 1765 aa18.46■□□□□ 0.55
TDP2-204ENST00000478507 NBPF14Q5TI25 921 aa18.46■□□□□ 0.55
TDP2-204ENST00000478507 PLSCR1O15162 318 aa18.45■□□□□ 0.54
TDP2-204ENST00000478507 EVC2Q86UK5 1308 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms