RNA–Protein interactions for RNA: ENST00000478420.1

SMARCA1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 3

Gene SMARCA1, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-204ENST00000478420 TIMELESSQ9UNS1 1208 aa8.03□□□□□ -1.12
SMARCA1-204ENST00000478420 PLA2G2CQ5R387 149 aa8.02□□□□□ -1.13
SMARCA1-204ENST00000478420 CLUAP1Q96AJ1 413 aa8.02□□□□□ -1.13
SMARCA1-204ENST00000478420 ZMYND15Q9H091 742 aa8.02□□□□□ -1.13
SMARCA1-204ENST00000478420 ABL2P42684 1182 aa8.01□□□□□ -1.13
SMARCA1-204ENST00000478420 NBPF14Q5TI25 921 aa8.01□□□□□ -1.13
SMARCA1-204ENST00000478420 WWC1Q8IX03 1113 aa8.01□□□□□ -1.13
SMARCA1-204ENST00000478420 ZC3H4Q9UPT8 1303 aaKnown RBP8.01□□□□□ -1.13
SMARCA1-204ENST00000478420 A6NJR5 290 aa8□□□□□ -1.13
SMARCA1-204ENST00000478420 RPIAP49247 311 aa8□□□□□ -1.13
SMARCA1-204ENST00000478420 GPKOWQ92917 476 aaPredicted RBP eCLIP8□□□□□ -1.13
SMARCA1-204ENST00000478420 CD2BP2O95400 341 aaKnown RBP7.99□□□□□ -1.13
SMARCA1-204ENST00000478420 TRIM32Q13049 653 aa7.99□□□□□ -1.13
SMARCA1-204ENST00000478420 SLC19A1P41440 591 aa7.98□□□□□ -1.13
SMARCA1-204ENST00000478420 LINC01559Q495D7 138 aa7.98□□□□□ -1.13
SMARCA1-204ENST00000478420 PDXDC2PQ6P474 469 aa7.98□□□□□ -1.13
SMARCA1-204ENST00000478420 PROSER2Q86WR7 435 aaPredicted RBP7.98□□□□□ -1.13
SMARCA1-204ENST00000478420 BAP1Q92560 729 aa7.98□□□□□ -1.13
SMARCA1-204ENST00000478420 GPR37L1O60883 481 aa7.97□□□□□ -1.13
SMARCA1-204ENST00000478420 LIAT1Q6ZQX7 453 aa7.97□□□□□ -1.13
SMARCA1-204ENST00000478420 ZNF511Q8NB15 262 aa7.97□□□□□ -1.13
SMARCA1-204ENST00000478420 PTK2Q05397 1052 aa7.96□□□□□ -1.14
SMARCA1-204ENST00000478420 IRF5Q13568 498 aa7.96□□□□□ -1.14
SMARCA1-204ENST00000478420 AGERQ15109 404 aa7.96□□□□□ -1.14
SMARCA1-204ENST00000478420 WASHC4Q2M389 1173 aa7.96□□□□□ -1.14
SMARCA1-204ENST00000478420 GPSM3Q9Y4H4 160 aa7.96□□□□□ -1.14
SMARCA1-204ENST00000478420 ZBBXA8MT70 800 aa7.95□□□□□ -1.14
SMARCA1-204ENST00000478420 WNT7BP56706 349 aa7.95□□□□□ -1.14
SMARCA1-204ENST00000478420 BPHLQ86WA6 291 aaPredicted RBP7.95□□□□□ -1.14
SMARCA1-204ENST00000478420 PRKD2Q9BZL6 878 aa7.95□□□□□ -1.14
SMARCA1-204ENST00000478420 SH3BP2P78314 561 aa7.94□□□□□ -1.14
SMARCA1-204ENST00000478420 FNBP4Q8N3X1 1017 aaPredicted RBP7.94□□□□□ -1.14
SMARCA1-204ENST00000478420 EMID1Q96A84 441 aaPredicted RBP7.94□□□□□ -1.14
SMARCA1-204ENST00000478420 ARHGAP9Q9BRR9 750 aa7.94□□□□□ -1.14
SMARCA1-204ENST00000478420 ZNF330Q9Y3S2 320 aaPredicted RBP7.94□□□□□ -1.14
SMARCA1-204ENST00000478420 V9GY48 417 aaPredicted RBP7.94□□□□□ -1.14
SMARCA1-204ENST00000478420 TRAK2O60296 914 aa7.93□□□□□ -1.14
SMARCA1-204ENST00000478420 FBXO45P0C2W1 286 aa7.93□□□□□ -1.14
SMARCA1-204ENST00000478420 NR1H3Q13133 447 aa7.93□□□□□ -1.14
SMARCA1-204ENST00000478420 SPRYD7Q5W111 196 aa7.93□□□□□ -1.14
SMARCA1-204ENST00000478420 SH3BP5LQ7L8J4 393 aa7.93□□□□□ -1.14
SMARCA1-204ENST00000478420 FOXJ1Q92949 421 aa7.93□□□□□ -1.14
SMARCA1-204ENST00000478420 MAGEB6P1A0A0J9YX57 407 aa7.92□□□□□ -1.14
SMARCA1-204ENST00000478420 SKOR1P84550 965 aa7.92□□□□□ -1.14
SMARCA1-204ENST00000478420 VAC14Q08AM6 782 aa7.92□□□□□ -1.14
SMARCA1-204ENST00000478420 ZBTB33Q86T24 672 aa7.92□□□□□ -1.14
SMARCA1-204ENST00000478420 SH3RF1Q7Z6J0 888 aa7.91□□□□□ -1.14
SMARCA1-204ENST00000478420 ZNF598Q86UK7 904 aaKnown RBP7.91□□□□□ -1.14
SMARCA1-204ENST00000478420 CARD14Q9BXL6 1004 aa7.91□□□□□ -1.14
SMARCA1-204ENST00000478420 IRX2Q9BZI1 471 aaPredicted RBP7.91□□□□□ -1.14
SMARCA1-204ENST00000478420 RGS20O76081 388 aa7.9□□□□□ -1.14
SMARCA1-204ENST00000478420 VARSP26640 1264 aaKnown RBP7.9□□□□□ -1.14
SMARCA1-204ENST00000478420 EIF4G2P78344 907 aaKnown RBP eCLIP7.9□□□□□ -1.14
SMARCA1-204ENST00000478420 RC3H1Q5TC82 1133 aaKnown RBP7.9□□□□□ -1.14
SMARCA1-204ENST00000478420 ZNF697Q5TEC3 545 aa7.9□□□□□ -1.14
SMARCA1-204ENST00000478420 EHBP1Q8NDI1 1231 aa7.9□□□□□ -1.14
SMARCA1-204ENST00000478420 ADAM32Q8TC27 787 aa7.9□□□□□ -1.14
SMARCA1-204ENST00000478420 OCSTAMPQ9BR26 566 aa7.9□□□□□ -1.14
SMARCA1-204ENST00000478420 C4orf48Q5BLP8 95 aa7.89□□□□□ -1.15
SMARCA1-204ENST00000478420 ZNF592Q92610 1267 aa7.89□□□□□ -1.15
SMARCA1-204ENST00000478420 WNT7AO00755 349 aa7.88□□□□□ -1.15
SMARCA1-204ENST00000478420 SOX11P35716 441 aa7.88□□□□□ -1.15
SMARCA1-204ENST00000478420 ERFEQ4G0M1 354 aa7.88□□□□□ -1.15
SMARCA1-204ENST00000478420 FAM174AQ8TBP5 190 aa7.88□□□□□ -1.15
SMARCA1-204ENST00000478420 POM121CA8CG34 1229 aa7.87□□□□□ -1.15
SMARCA1-204ENST00000478420 C1QTNF2Q9BXJ5 285 aa7.87□□□□□ -1.15
SMARCA1-204ENST00000478420 ZNF777Q9ULD5 760 aaPredicted RBP7.87□□□□□ -1.15
SMARCA1-204ENST00000478420 PCDHB9Q9Y5E1 797 aa7.87□□□□□ -1.15
SMARCA1-204ENST00000478420 MCCD1P59942 119 aaPredicted RBP7.86□□□□□ -1.15
SMARCA1-204ENST00000478420 FOXC1Q12948 553 aa7.86□□□□□ -1.15
SMARCA1-204ENST00000478420 SEMA3FQ13275 785 aa7.86□□□□□ -1.15
SMARCA1-204ENST00000478420 DZIP3Q86Y13 1208 aaKnown RBP7.86□□□□□ -1.15
SMARCA1-204ENST00000478420 SLC10A4Q96EP9 437 aa7.86□□□□□ -1.15
SMARCA1-204ENST00000478420 TRMT44Q8IYL2 757 aaKnown RBP7.85□□□□□ -1.15
SMARCA1-204ENST00000478420 MRGPRX2Q96LB1 330 aa7.85□□□□□ -1.15
SMARCA1-204ENST00000478420 SUPT5HO00267 1087 aaKnown RBP7.84□□□□□ -1.15
SMARCA1-204ENST00000478420 CDV3Q9UKY7 258 aaKnown RBP7.84□□□□□ -1.15
SMARCA1-204ENST00000478420 ARID5BQ14865 1188 aa7.83□□□□□ -1.16
SMARCA1-204ENST00000478420 NBPF20Q3BBV1 942 aa7.83□□□□□ -1.16
SMARCA1-204ENST00000478420 HDGFL1Q5TGJ6 251 aa7.83□□□□□ -1.16
SMARCA1-204ENST00000478420 GLMNQ92990 594 aa7.83□□□□□ -1.16
SMARCA1-204ENST00000478420 CALR3Q96L12 384 aaKnown RBP7.83□□□□□ -1.16
SMARCA1-204ENST00000478420 ALG2Q9H553 416 aa7.83□□□□□ -1.16
SMARCA1-204ENST00000478420 PKD2L1Q9P0L9 805 aa7.83□□□□□ -1.16
SMARCA1-204ENST00000478420 ARID3CA6NKF2 412 aa7.82□□□□□ -1.16
SMARCA1-204ENST00000478420 SIAH2O43255 324 aa7.82□□□□□ -1.16
SMARCA1-204ENST00000478420 VASH1Q7L8A9 365 aaPredicted RBP7.82□□□□□ -1.16
SMARCA1-204ENST00000478420 MPNDQ8N594 471 aa7.82□□□□□ -1.16
SMARCA1-204ENST00000478420 TNFRSF10AO00220 468 aa7.81□□□□□ -1.16
SMARCA1-204ENST00000478420 GDF9O60383 454 aa7.81□□□□□ -1.16
SMARCA1-204ENST00000478420 ADAMTS19Q8TE59 1207 aa7.81□□□□□ -1.16
SMARCA1-204ENST00000478420 CDK15Q96Q40 435 aa7.81□□□□□ -1.16
SMARCA1-204ENST00000478420 CEP126Q9P2H0 1117 aa7.81□□□□□ -1.16
SMARCA1-204ENST00000478420 MAP4K5Q9Y4K4 846 aa7.81□□□□□ -1.16
SMARCA1-204ENST00000478420 TLL2Q9Y6L7 1015 aa7.81□□□□□ -1.16
SMARCA1-204ENST00000478420 CYP4X1Q8N118 509 aa7.8□□□□□ -1.16
SMARCA1-204ENST00000478420 SNIP1Q8TAD8 396 aaKnown RBP7.8□□□□□ -1.16
SMARCA1-204ENST00000478420 TTC24A2A3L6 582 aaPredicted RBP7.79□□□□□ -1.16
SMARCA1-204ENST00000478420 ALDH1A1P00352 501 aa7.79□□□□□ -1.16
SMARCA1-204ENST00000478420 PRR20EP86478 221 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms