RNA–Protein interactions for RNA: ENST00000478412.1

LRCH1-206, Transcript of leucine rich repeats and calponin homology domain containing 1, humanhuman

TSL 4

Gene LRCH1, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1-206ENST00000478412 SETBP1Q9Y6X0 1596 aa7.44□□□□□ -1.22
LRCH1-206ENST00000478412 XRN1Q8IZH2 1706 aaKnown RBP7.44□□□□□ -1.22
LRCH1-206ENST00000478412 IQGAP3Q86VI3 1631 aa7.43□□□□□ -1.22
LRCH1-206ENST00000478412 DPY19L2Q6NUT2 758 aa7.43□□□□□ -1.22
LRCH1-206ENST00000478412 NGLY1Q96IV0 654 aa7.43□□□□□ -1.22
LRCH1-206ENST00000478412 ATAD2Q6PL18 1390 aa7.43□□□□□ -1.22
LRCH1-206ENST00000478412 PTPRUQ92729 1446 aa7.43□□□□□ -1.22
LRCH1-206ENST00000478412 CCDC125Q86Z20 511 aa7.42□□□□□ -1.22
LRCH1-206ENST00000478412 MARVELD3Q96A59 401 aa7.42□□□□□ -1.22
LRCH1-206ENST00000478412 QTRT2Q9H974 415 aaKnown RBP7.42□□□□□ -1.22
LRCH1-206ENST00000478412 CHIC2Q9UKJ5 165 aa7.42□□□□□ -1.22
LRCH1-206ENST00000478412 PNPLA6Q8IY17 1366 aa7.42□□□□□ -1.22
LRCH1-206ENST00000478412 E9PCH4 1651 aa7.41□□□□□ -1.22
LRCH1-206ENST00000478412 PTCH1Q13635 1447 aa7.41□□□□□ -1.22
LRCH1-206ENST00000478412 ADGRL3Q9HAR2 1447 aa7.41□□□□□ -1.22
LRCH1-206ENST00000478412 NRXN3Q9Y4C0 1643 aa7.41□□□□□ -1.22
LRCH1-206ENST00000478412 NUTM2BA6NNL0 878 aaPredicted RBP7.4□□□□□ -1.22
LRCH1-206ENST00000478412 NUTM2EB1AL46 878 aaPredicted RBP7.4□□□□□ -1.22
LRCH1-206ENST00000478412 NUTM2AQ8IVF1 878 aaPredicted RBP7.4□□□□□ -1.22
LRCH1-206ENST00000478412 FNBP4Q8N3X1 1017 aaPredicted RBP7.4□□□□□ -1.22
LRCH1-206ENST00000478412 BOLA1Q9Y3E2 137 aa7.4□□□□□ -1.22
LRCH1-206ENST00000478412 ROCK1Q13464 1354 aa7.4□□□□□ -1.22
LRCH1-206ENST00000478412 PRAG1Q86YV5 1406 aa7.4□□□□□ -1.22
LRCH1-206ENST00000478412 SOS2Q07890 1332 aaPredicted RBP7.39□□□□□ -1.23
LRCH1-206ENST00000478412 C8orf37Q96NL8 207 aa7.39□□□□□ -1.23
LRCH1-206ENST00000478412 TRPC5Q9UL62 973 aaPredicted RBP7.39□□□□□ -1.23
LRCH1-206ENST00000478412 COL22A1Q8NFW1 1626 aaPredicted RBP7.38□□□□□ -1.23
LRCH1-206ENST00000478412 CHGAP10645 457 aaKnown RBP7.38□□□□□ -1.23
LRCH1-206ENST00000478412 NUTM2DQ5VT03 806 aaPredicted RBP7.38□□□□□ -1.23
LRCH1-206ENST00000478412 C1orf167Q5SNV9 1468 aa7.37□□□□□ -1.23
LRCH1-206ENST00000478412 ATRNO75882 1429 aa7.37□□□□□ -1.23
LRCH1-206ENST00000478412 METP08581 1390 aa7.37□□□□□ -1.23
LRCH1-206ENST00000478412 EFCAB3Q8N7B9 438 aa7.37□□□□□ -1.23
LRCH1-206ENST00000478412 NALCNQ8IZF0 1738 aa7.37□□□□□ -1.23
LRCH1-206ENST00000478412 EMP3P54852 163 aa7.36□□□□□ -1.23
LRCH1-206ENST00000478412 RNF25Q96BH1 459 aaPredicted RBP7.36□□□□□ -1.23
LRCH1-206ENST00000478412 USP21Q9UK80 565 aa7.36□□□□□ -1.23
LRCH1-206ENST00000478412 G3V3G9 751 aa7.35□□□□□ -1.23
LRCH1-206ENST00000478412 MYOM2P54296 1465 aa7.35□□□□□ -1.23
LRCH1-206ENST00000478412 SPHKAPQ2M3C7 1700 aa7.35□□□□□ -1.23
LRCH1-206ENST00000478412 NUP155O75694 1391 aa7.34□□□□□ -1.23
LRCH1-206ENST00000478412 NEXMIFQ5QGS0 1516 aa7.34□□□□□ -1.23
LRCH1-206ENST00000478412 ADAMTS2O95450 1211 aa7.34□□□□□ -1.23
LRCH1-206ENST00000478412 HOXB3P14651 431 aaPredicted RBP7.34□□□□□ -1.23
LRCH1-206ENST00000478412 SPNS2Q8IVW8 549 aa7.34□□□□□ -1.23
LRCH1-206ENST00000478412 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.34□□□□□ -1.23
LRCH1-206ENST00000478412 BCL9LQ86UU0 1499 aa7.34□□□□□ -1.23
LRCH1-206ENST00000478412 HFM1A2PYH4 1435 aa7.34□□□□□ -1.23
LRCH1-206ENST00000478412 NPHP3Q7Z494 1330 aa7.33□□□□□ -1.24
LRCH1-206ENST00000478412 MARF1Q9Y4F3 1742 aaKnown RBP7.33□□□□□ -1.24
LRCH1-206ENST00000478412 LOC105371045A0A1W2PR82 267 aa7.33□□□□□ -1.24
LRCH1-206ENST00000478412 POTEB3A0JP26 581 aa7.33□□□□□ -1.24
LRCH1-206ENST00000478412 RIOK3O14730 519 aaKnown RBP7.33□□□□□ -1.24
LRCH1-206ENST00000478412 MMRN1Q13201 1228 aa7.33□□□□□ -1.24
LRCH1-206ENST00000478412 FAM50AQ14320 339 aaKnown RBP7.33□□□□□ -1.24
LRCH1-206ENST00000478412 POTEBQ6S5H4 581 aa7.33□□□□□ -1.24
LRCH1-206ENST00000478412 HS3ST6Q96QI5 342 aa7.33□□□□□ -1.24
LRCH1-206ENST00000478412 BLMP54132 1417 aaPredicted RBP7.33□□□□□ -1.24
LRCH1-206ENST00000478412 LRP5O75197 1615 aa7.32□□□□□ -1.24
LRCH1-206ENST00000478412 DDX17Q92841 729 aaKnown RBP7.32□□□□□ -1.24
LRCH1-206ENST00000478412 GJD4Q96KN9 370 aaPredicted RBP7.32□□□□□ -1.24
LRCH1-206ENST00000478412 CDC42BPGQ6DT37 1551 aa7.32□□□□□ -1.24
LRCH1-206ENST00000478412 LRPPRCP42704 1394 aaKnown RBP7.32□□□□□ -1.24
LRCH1-206ENST00000478412 RPGRIP1LQ68CZ1 1315 aa7.31□□□□□ -1.24
LRCH1-206ENST00000478412 PXDNQ92626 1479 aa7.31□□□□□ -1.24
LRCH1-206ENST00000478412 VGFO15240 615 aaPredicted RBP7.31□□□□□ -1.24
LRCH1-206ENST00000478412 ZNF326Q5BKZ1 582 aaKnown RBP7.31□□□□□ -1.24
LRCH1-206ENST00000478412 ORAI2Q96SN7 254 aa7.31□□□□□ -1.24
LRCH1-206ENST00000478412 KRTAP3-3Q9BYR6 98 aa7.31□□□□□ -1.24
LRCH1-206ENST00000478412 KRTAP3-2Q9BYR7 98 aa7.31□□□□□ -1.24
LRCH1-206ENST00000478412 SLIT2O94813 1529 aa7.31□□□□□ -1.24
LRCH1-206ENST00000478412 ROBO2Q9HCK4 1378 aa7.31□□□□□ -1.24
LRCH1-206ENST00000478412 KIF1BO60333 1816 aa7.3□□□□□ -1.24
LRCH1-206ENST00000478412 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.3□□□□□ -1.24
LRCH1-206ENST00000478412 FAM205CA6NFA0 338 aa7.3□□□□□ -1.24
LRCH1-206ENST00000478412 ZFP91Q96JP5 570 aaPredicted RBP7.3□□□□□ -1.24
LRCH1-206ENST00000478412 CLTCL1P53675 1640 aa7.3□□□□□ -1.24
LRCH1-206ENST00000478412 ONECUT3O60422 494 aaPredicted RBP7.29□□□□□ -1.24
LRCH1-206ENST00000478412 UNC5CLQ8IV45 518 aa7.29□□□□□ -1.24
LRCH1-206ENST00000478412 MICALL2Q8IY33 904 aa7.29□□□□□ -1.24
LRCH1-206ENST00000478412 MS4A4AQ96JQ5 239 aa7.29□□□□□ -1.24
LRCH1-206ENST00000478412 GLI3P10071 1580 aa7.29□□□□□ -1.24
LRCH1-206ENST00000478412 TECPR2O15040 1411 aa7.28□□□□□ -1.24
LRCH1-206ENST00000478412 SOX12O15370 315 aa7.28□□□□□ -1.24
LRCH1-206ENST00000478412 HOXB1P14653 301 aaPredicted RBP7.28□□□□□ -1.24
LRCH1-206ENST00000478412 TMEM92Q6UXU6 159 aa7.28□□□□□ -1.24
LRCH1-206ENST00000478412 RALGAPBQ86X10 1494 aa7.28□□□□□ -1.24
LRCH1-206ENST00000478412 DOK7Q18PE1 504 aa7.27□□□□□ -1.25
LRCH1-206ENST00000478412 KIF1AQ12756 1690 aa7.27□□□□□ -1.25
LRCH1-206ENST00000478412 NWD2Q9ULI1 1742 aa7.27□□□□□ -1.25
LRCH1-206ENST00000478412 CCDC144AA2RUR9 1427 aa7.27□□□□□ -1.25
LRCH1-206ENST00000478412 SPATA31A3Q5VYP0 1347 aa7.27□□□□□ -1.25
LRCH1-206ENST00000478412 SLC24A1O60721 1099 aa7.26□□□□□ -1.25
LRCH1-206ENST00000478412 SF3B2Q13435 895 aaKnown RBP7.26□□□□□ -1.25
LRCH1-206ENST00000478412 VPS72Q15906 364 aa7.26□□□□□ -1.25
LRCH1-206ENST00000478412 ESCO1Q5FWF5 840 aa7.26□□□□□ -1.25
LRCH1-206ENST00000478412 ZNF710Q8N1W2 664 aa7.26□□□□□ -1.25
LRCH1-206ENST00000478412 PHF8Q9UPP1 1060 aa7.26□□□□□ -1.25
LRCH1-206ENST00000478412 USP32Q8NFA0 1604 aa7.26□□□□□ -1.25
LRCH1-206ENST00000478412 PPLO60437 1756 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms