RNA–Protein interactions for RNA: ENST00000478295.1

PROM2-208, Transcript of prominin 2, humanhuman

TSL 3

Gene PROM2, Length 508 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM2-208ENST00000478295 GPRASP1Q5JY77 1395 aa21.36■■□□□ 1.01
PROM2-208ENST00000478295 ONECUT3O60422 494 aaPredicted RBP21.33■■□□□ 1.01
PROM2-208ENST00000478295 PAK3O75914 559 aaPredicted RBP21.33■■□□□ 1.01
PROM2-208ENST00000478295 BAG6P46379 1132 aa21.33■■□□□ 1.01
PROM2-208ENST00000478295 TRPM3Q9HCF6 1732 aaPredicted RBP21.32■■□□□ 1
PROM2-208ENST00000478295 NGDNQ8NEJ9 315 aaKnown RBP21.32■■□□□ 1
PROM2-208ENST00000478295 ITSN1Q15811 1721 aa21.32■■□□□ 1
PROM2-208ENST00000478295 PSDA5PKW4 1024 aaPredicted RBP21.31■■□□□ 1
PROM2-208ENST00000478295 TRIM26Q12899 539 aaPredicted RBP21.31■■□□□ 1
PROM2-208ENST00000478295 NBPF1Q3BBV0 1214 aa21.31■■□□□ 1
PROM2-208ENST00000478295 ATP7BP35670 1465 aa21.31■■□□□ 1
PROM2-208ENST00000478295 FAM182BQ5T319 152 aa21.29■■□□□ 1
PROM2-208ENST00000478295 ALS2Q96Q42 1657 aa21.28■■□□□ 1
PROM2-208ENST00000478295 L3MBTL2Q969R5 705 aa21.28■■□□□ 1
PROM2-208ENST00000478295 NUDT16Q96DE0 195 aaKnown RBP21.28■■□□□ 1
PROM2-208ENST00000478295 NRAPQ86VF7 1730 aa21.27■■□□□ 1
PROM2-208ENST00000478295 CDK19Q9BWU1 502 aa21.27■■□□□ 1
PROM2-208ENST00000478295 PRDM11Q9NQV5 511 aa21.27■■□□□ 1
PROM2-208ENST00000478295 COL14A1Q05707 1796 aaKnown RBP21.26■□□□□ 0.99
PROM2-208ENST00000478295 SIN3AQ96ST3 1273 aa21.26■□□□□ 0.99
PROM2-208ENST00000478295 EN1Q05925 392 aaPredicted RBP21.25■□□□□ 0.99
PROM2-208ENST00000478295 TOPAZ1Q8N9V7 1692 aa21.24■□□□□ 0.99
PROM2-208ENST00000478295 SPATA31A5Q5VU36 1347 aa21.24■□□□□ 0.99
PROM2-208ENST00000478295 SPATA31A7Q8IWB4 1347 aa21.24■□□□□ 0.99
PROM2-208ENST00000478295 CENPJQ9HC77 1338 aaPredicted RBP21.24■□□□□ 0.99
PROM2-208ENST00000478295 CCDC61Q9Y6R9 512 aa21.23■□□□□ 0.99
PROM2-208ENST00000478295 NEUROD1Q13562 356 aa21.22■□□□□ 0.99
PROM2-208ENST00000478295 STRN4Q9NRL3 753 aa21.22■□□□□ 0.99
PROM2-208ENST00000478295 CHRNA2Q15822 529 aa21.21■□□□□ 0.99
PROM2-208ENST00000478295 POLR3AO14802 1390 aaPredicted RBP21.21■□□□□ 0.99
PROM2-208ENST00000478295 LRP5O75197 1615 aa21.2■□□□□ 0.98
PROM2-208ENST00000478295 TRPM1Q7Z4N2 1603 aa21.2■□□□□ 0.98
PROM2-208ENST00000478295 NUTM2GQ5VZR2 741 aa21.2■□□□□ 0.98
PROM2-208ENST00000478295 QRICH2Q9H0J4 1663 aa21.19■□□□□ 0.98
PROM2-208ENST00000478295 CRYBG1Q9Y4K1 1723 aa21.19■□□□□ 0.98
PROM2-208ENST00000478295 PLEKHG3A1L390 1219 aa21.19■□□□□ 0.98
PROM2-208ENST00000478295 R3HDM1Q15032 1099 aaKnown RBP21.19■□□□□ 0.98
PROM2-208ENST00000478295 KIAA0232Q92628 1395 aa21.19■□□□□ 0.98
PROM2-208ENST00000478295 ZC3H6P61129 1189 aaKnown RBP21.18■□□□□ 0.98
PROM2-208ENST00000478295 SRPK2P78362 688 aaKnown RBP21.18■□□□□ 0.98
PROM2-208ENST00000478295 USP35Q9P2H5 1018 aa21.18■□□□□ 0.98
PROM2-208ENST00000478295 ACEP12821 1306 aa21.18■□□□□ 0.98
PROM2-208ENST00000478295 RGPD1P0DJD0 1748 aa21.18■□□□□ 0.98
PROM2-208ENST00000478295 NBPF8Q3BBV2 869 aa21.16■□□□□ 0.98
PROM2-208ENST00000478295 ROCK2O75116 1388 aaKnown RBP21.15■□□□□ 0.98
PROM2-208ENST00000478295 SPATA31A1Q5TZJ5 1347 aa21.15■□□□□ 0.98
PROM2-208ENST00000478295 EZH2Q15910 746 aaKnown RBP21.15■□□□□ 0.98
PROM2-208ENST00000478295 PPIP5K1Q6PFW1 1433 aa21.14■□□□□ 0.98
PROM2-208ENST00000478295 TRIM37O94972 964 aa21.14■□□□□ 0.97
PROM2-208ENST00000478295 EVA1CP58658 441 aa21.14■□□□□ 0.97
PROM2-208ENST00000478295 CABP2Q9NPB3 220 aa21.14■□□□□ 0.97
PROM2-208ENST00000478295 THSD7AQ9UPZ6 1657 aa21.14■□□□□ 0.97
PROM2-208ENST00000478295 PHRF1Q9P1Y6 1649 aaKnown RBP21.12■□□□□ 0.97
PROM2-208ENST00000478295 FAM196AQ6ZSG2 479 aa21.12■□□□□ 0.97
PROM2-208ENST00000478295 APBA3O96018 575 aa21.11■□□□□ 0.97
PROM2-208ENST00000478295 EVC2Q86UK5 1308 aa21.1■□□□□ 0.97
PROM2-208ENST00000478295 PDE3BQ13370 1112 aa21.1■□□□□ 0.97
PROM2-208ENST00000478295 ABTB2Q8N961 1025 aa21.09■□□□□ 0.97
PROM2-208ENST00000478295 DISP2A7MBM2 1401 aa21.09■□□□□ 0.97
PROM2-208ENST00000478295 TNS1Q9HBL0 1735 aaKnown RBP21.09■□□□□ 0.97
PROM2-208ENST00000478295 BRD4O60885 1362 aaPredicted RBP21.09■□□□□ 0.97
PROM2-208ENST00000478295 ZBTB7CA1YPR0 619 aa21.07■□□□□ 0.96
PROM2-208ENST00000478295 CAMKK2Q96RR4 588 aa21.07■□□□□ 0.96
PROM2-208ENST00000478295 TONSLQ96HA7 1378 aa21.07■□□□□ 0.96
PROM2-208ENST00000478295 SSH2Q76I76 1423 aa21.06■□□□□ 0.96
PROM2-208ENST00000478295 CABP1Q9NZU7 370 aa21.06■□□□□ 0.96
PROM2-208ENST00000478295 LARP1Q6PKG0 1096 aaKnown RBP21.05■□□□□ 0.96
PROM2-208ENST00000478295 NRKQ7Z2Y5 1582 aa21.05■□□□□ 0.96
PROM2-208ENST00000478295 USP19O94966 1318 aa21.04■□□□□ 0.96
PROM2-208ENST00000478295 USP6P35125 1406 aa21.04■□□□□ 0.96
PROM2-208ENST00000478295 NLRP13Q86W25 1043 aa21.04■□□□□ 0.96
PROM2-208ENST00000478295 BARGINQ6ZT62 677 aa21.03■□□□□ 0.96
PROM2-208ENST00000478295 TCP11L2Q8N4U5 519 aa21.03■□□□□ 0.96
PROM2-208ENST00000478295 CPDO75976 1380 aa21.02■□□□□ 0.96
PROM2-208ENST00000478295 SBNO2Q9Y2G9 1366 aa21.01■□□□□ 0.95
PROM2-208ENST00000478295 CARD11Q9BXL7 1154 aa21.01■□□□□ 0.95
PROM2-208ENST00000478295 PARD3Q8TEW0 1356 aa21■□□□□ 0.95
PROM2-208ENST00000478295 CAMTA1Q9Y6Y1 1673 aa21■□□□□ 0.95
PROM2-208ENST00000478295 NBPF14Q5TI25 921 aa21■□□□□ 0.95
PROM2-208ENST00000478295 GCP02774 474 aa20.98■□□□□ 0.95
PROM2-208ENST00000478295 PCGF6Q9BYE7 350 aa20.98■□□□□ 0.95
PROM2-208ENST00000478295 LMO7Q8WWI1 1683 aa20.97■□□□□ 0.95
PROM2-208ENST00000478295 NLRP6P59044 892 aa20.97■□□□□ 0.95
PROM2-208ENST00000478295 ZNF692Q9BU19 519 aaPredicted RBP20.97■□□□□ 0.95
PROM2-208ENST00000478295 AKAP12Q02952 1782 aa20.96■□□□□ 0.95
PROM2-208ENST00000478295 THRAP3Q9Y2W1 955 aaKnown RBP20.96■□□□□ 0.95
PROM2-208ENST00000478295 SLIT3O75094 1523 aa20.95■□□□□ 0.94
PROM2-208ENST00000478295 PIK3C2AO00443 1686 aa20.95■□□□□ 0.94
PROM2-208ENST00000478295 PPP1R1BQ9UD71 204 aaPredicted RBP20.94■□□□□ 0.94
PROM2-208ENST00000478295 COL5A2P05997 1499 aaPredicted RBP20.94■□□□□ 0.94
PROM2-208ENST00000478295 TTC21BQ7Z4L5 1316 aa20.93■□□□□ 0.94
PROM2-208ENST00000478295 CPSF1Q10570 1443 aaKnown RBP20.93■□□□□ 0.94
PROM2-208ENST00000478295 RREB1Q92766 1687 aa20.93■□□□□ 0.94
PROM2-208ENST00000478295 TTC21AQ8NDW8 1320 aa20.92■□□□□ 0.94
PROM2-208ENST00000478295 NUP188Q5SRE5 1749 aa20.92■□□□□ 0.94
PROM2-208ENST00000478295 CRB1P82279 1406 aa20.91■□□□□ 0.94
PROM2-208ENST00000478295 TOM1L2Q6ZVM7 507 aa20.91■□□□□ 0.94
PROM2-208ENST00000478295 KTN1Q86UP2 1357 aaKnown RBP20.9■□□□□ 0.94
PROM2-208ENST00000478295 AATKQ6ZMQ8 1374 aa20.89■□□□□ 0.93
PROM2-208ENST00000478295 SPON1Q9HCB6 807 aa20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms