RNA–Protein interactions for RNA: ENST00000478238.1

SYCP3-205, Transcript of synaptonemal complex protein 3, humanhuman

TSL 3

Gene SYCP3, Length 665 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP3-205ENST00000478238 NUTM2BA6NNL0 878 aaPredicted RBP11.44□□□□□ -0.58
SYCP3-205ENST00000478238 NUTM2EB1AL46 878 aaPredicted RBP11.44□□□□□ -0.58
SYCP3-205ENST00000478238 LILRB3O75022 631 aa11.44□□□□□ -0.58
SYCP3-205ENST00000478238 F12P00748 615 aaPredicted RBP11.44□□□□□ -0.58
SYCP3-205ENST00000478238 NUTM2DQ5VT03 806 aaPredicted RBP11.44□□□□□ -0.58
SYCP3-205ENST00000478238 NUTM2AQ8IVF1 878 aaPredicted RBP11.44□□□□□ -0.58
SYCP3-205ENST00000478238 MAP10Q9P2G4 905 aa11.44□□□□□ -0.58
SYCP3-205ENST00000478238 CLK2P49760 499 aaKnown RBP11.43□□□□□ -0.58
SYCP3-205ENST00000478238 ATP13A2Q9NQ11 1180 aa11.43□□□□□ -0.58
SYCP3-205ENST00000478238 C11orf95C9JLR9 678 aaPredicted RBP11.42□□□□□ -0.58
SYCP3-205ENST00000478238 PER1O15534 1290 aaPredicted RBP11.42□□□□□ -0.58
SYCP3-205ENST00000478238 TSC1Q92574 1164 aa11.42□□□□□ -0.58
SYCP3-205ENST00000478238 RSPH6AQ9H0K4 717 aa11.42□□□□□ -0.58
SYCP3-205ENST00000478238 WASF2Q9Y6W5 498 aa11.41□□□□□ -0.58
SYCP3-205ENST00000478238 VARSP26640 1264 aaKnown RBP11.4□□□□□ -0.58
SYCP3-205ENST00000478238 POLR3EQ9NVU0 708 aa11.4□□□□□ -0.58
SYCP3-205ENST00000478238 TLL2Q9Y6L7 1015 aa11.4□□□□□ -0.58
SYCP3-205ENST00000478238 RTL5Q5HYW3 569 aaPredicted RBP11.39□□□□□ -0.59
SYCP3-205ENST00000478238 GPBP1L1Q9HC44 474 aaPredicted RBP11.38□□□□□ -0.59
SYCP3-205ENST00000478238 HELBQ8NG08 1087 aaPredicted RBP11.37□□□□□ -0.59
SYCP3-205ENST00000478238 KDM4CQ9H3R0 1056 aa11.37□□□□□ -0.59
SYCP3-205ENST00000478238 MPNDQ8N594 471 aa11.36□□□□□ -0.59
SYCP3-205ENST00000478238 FOXJ1Q92949 421 aa11.36□□□□□ -0.59
SYCP3-205ENST00000478238 PLEKHG3A1L390 1219 aa11.35□□□□□ -0.59
SYCP3-205ENST00000478238 SENP2Q9HC62 589 aa11.35□□□□□ -0.59
SYCP3-205ENST00000478238 FAM174AQ8TBP5 190 aa11.34□□□□□ -0.59
SYCP3-205ENST00000478238 TRIM47Q96LD4 638 aa11.34□□□□□ -0.59
SYCP3-205ENST00000478238 CAPN5O15484 640 aaPredicted RBP11.33□□□□□ -0.6
SYCP3-205ENST00000478238 SNRPBP14678 240 aaKnown RBP11.33□□□□□ -0.6
SYCP3-205ENST00000478238 NNTQ13423 1086 aa11.32□□□□□ -0.6
SYCP3-205ENST00000478238 DDRGK1Q96HY6 314 aa11.32□□□□□ -0.6
SYCP3-205ENST00000478238 FAM117AQ9C073 453 aa11.32□□□□□ -0.6
SYCP3-205ENST00000478238 AGERQ15109 404 aa11.31□□□□□ -0.6
SYCP3-205ENST00000478238 SKIV2LQ15477 1246 aaKnown RBP11.31□□□□□ -0.6
SYCP3-205ENST00000478238 C4orf48Q5BLP8 95 aa11.31□□□□□ -0.6
SYCP3-205ENST00000478238 SH3D19Q5HYK7 790 aa11.31□□□□□ -0.6
SYCP3-205ENST00000478238 TREML4Q6UXN2 200 aa11.31□□□□□ -0.6
SYCP3-205ENST00000478238 KIFC2Q96AC6 838 aa11.31□□□□□ -0.6
SYCP3-205ENST00000478238 ARMC2Q8NEN0 867 aa11.3□□□□□ -0.6
SYCP3-205ENST00000478238 BMP1P13497 986 aa11.29□□□□□ -0.6
SYCP3-205ENST00000478238 TRIM46Q7Z4K8 759 aa11.29□□□□□ -0.6
SYCP3-205ENST00000478238 BPHLQ86WA6 291 aaPredicted RBP11.29□□□□□ -0.6
SYCP3-205ENST00000478238 CDK15Q96Q40 435 aa11.29□□□□□ -0.6
SYCP3-205ENST00000478238 ADH1CP00326 375 aa11.28□□□□□ -0.6
SYCP3-205ENST00000478238 CTDSPL2Q05D32 466 aa11.28□□□□□ -0.6
SYCP3-205ENST00000478238 LCE2AQ5TA79 106 aaPredicted RBP11.28□□□□□ -0.6
SYCP3-205ENST00000478238 PROCA1Q8NCQ7 364 aaPredicted RBP11.28□□□□□ -0.6
SYCP3-205ENST00000478238 ARID5BQ14865 1188 aa11.27□□□□□ -0.61
SYCP3-205ENST00000478238 NBPF14Q5TI25 921 aa11.27□□□□□ -0.61
SYCP3-205ENST00000478238 FBXO31Q5XUX0 539 aaPredicted RBP11.27□□□□□ -0.61
SYCP3-205ENST00000478238 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.27□□□□□ -0.61
SYCP3-205ENST00000478238 TIMP2P16035 220 aa11.25□□□□□ -0.61
SYCP3-205ENST00000478238 SH3RF1Q7Z6J0 888 aa11.25□□□□□ -0.61
SYCP3-205ENST00000478238 ATP1B4Q9UN42 357 aaPredicted RBP11.25□□□□□ -0.61
SYCP3-205ENST00000478238 WFS1O76024 890 aa11.24□□□□□ -0.61
SYCP3-205ENST00000478238 WDR4P57081 412 aaKnown RBP11.24□□□□□ -0.61
SYCP3-205ENST00000478238 SH3BP5LQ7L8J4 393 aa11.24□□□□□ -0.61
SYCP3-205ENST00000478238 C1QTNF2Q9BXJ5 285 aa11.24□□□□□ -0.61
SYCP3-205ENST00000478238 NFX1Q12986 1120 aaKnown RBP11.23□□□□□ -0.61
SYCP3-205ENST00000478238 PPP2R2DQ66LE6 453 aa11.23□□□□□ -0.61
SYCP3-205ENST00000478238 LRRN4Q8WUT4 740 aa11.23□□□□□ -0.61
SYCP3-205ENST00000478238 KLF16Q9BXK1 252 aaPredicted RBP11.23□□□□□ -0.61
SYCP3-205ENST00000478238 GPKOWQ92917 476 aaPredicted RBP eCLIP11.22□□□□□ -0.61
SYCP3-205ENST00000478238 NR3C2P08235 984 aa11.21□□□□□ -0.61
SYCP3-205ENST00000478238 GRM5P41594 1212 aa11.21□□□□□ -0.61
SYCP3-205ENST00000478238 NR5A1Q13285 461 aa11.21□□□□□ -0.61
SYCP3-205ENST00000478238 MAGEB6P1A0A0J9YX57 407 aa11.2□□□□□ -0.62
SYCP3-205ENST00000478238 ZFP42Q96MM3 310 aa11.2□□□□□ -0.62
SYCP3-205ENST00000478238 TERTO14746 1132 aaKnown RBP11.19□□□□□ -0.62
SYCP3-205ENST00000478238 MRPL14Q6P1L8 145 aaKnown RBP11.19□□□□□ -0.62
SYCP3-205ENST00000478238 NR6A1Q15406 480 aa11.18□□□□□ -0.62
SYCP3-205ENST00000478238 TRMT44Q8IYL2 757 aaKnown RBP11.18□□□□□ -0.62
SYCP3-205ENST00000478238 ITPKCQ96DU7 683 aa11.18□□□□□ -0.62
SYCP3-205ENST00000478238 CARD14Q9BXL6 1004 aa11.18□□□□□ -0.62
SYCP3-205ENST00000478238 ZFAND3Q9H8U3 227 aa11.18□□□□□ -0.62
SYCP3-205ENST00000478238 MAP4K5Q9Y4K4 846 aa11.18□□□□□ -0.62
SYCP3-205ENST00000478238 AP1G2O75843 785 aa11.17□□□□□ -0.62
SYCP3-205ENST00000478238 ZIC2O95409 532 aaPredicted RBP11.17□□□□□ -0.62
SYCP3-205ENST00000478238 FKBPLQ9UIM3 349 aa11.17□□□□□ -0.62
SYCP3-205ENST00000478238 FSHRP23945 695 aa11.16□□□□□ -0.62
SYCP3-205ENST00000478238 SCARF1Q14162 830 aa11.16□□□□□ -0.62
SYCP3-205ENST00000478238 PDXDC2PQ6P474 469 aa11.16□□□□□ -0.62
SYCP3-205ENST00000478238 VASH1Q7L8A9 365 aaPredicted RBP11.16□□□□□ -0.62
SYCP3-205ENST00000478238 ERFEQ4G0M1 354 aa11.15□□□□□ -0.62
SYCP3-205ENST00000478238 PURBQ96QR8 312 aaKnown RBP11.15□□□□□ -0.62
SYCP3-205ENST00000478238 LCE2CQ5TA81 110 aa11.14□□□□□ -0.63
SYCP3-205ENST00000478238 ARHGAP9Q9BRR9 750 aa11.14□□□□□ -0.63
SYCP3-205ENST00000478238 ZC3H4Q9UPT8 1303 aaKnown RBP11.13□□□□□ -0.63
SYCP3-205ENST00000478238 NEUROD2Q15784 382 aa11.13□□□□□ -0.63
SYCP3-205ENST00000478238 NXF1Q9UBU9 619 aaKnown RBP11.12□□□□□ -0.63
SYCP3-205ENST00000478238 USP17L8P0C7I0 530 aa11.11□□□□□ -0.63
SYCP3-205ENST00000478238 RFC5P40937 340 aa11.11□□□□□ -0.63
SYCP3-205ENST00000478238 EPS8L1Q8TE68 723 aa11.11□□□□□ -0.63
SYCP3-205ENST00000478238 GOPCQ9HD26 462 aa11.11□□□□□ -0.63
SYCP3-205ENST00000478238 CCDC116Q8IYX3 515 aa11.1□□□□□ -0.63
SYCP3-205ENST00000478238 HMX1Q9NP08 348 aaPredicted RBP11.1□□□□□ -0.63
SYCP3-205ENST00000478238 WIPF1O43516 503 aa11.09□□□□□ -0.63
SYCP3-205ENST00000478238 ZBTB33Q86T24 672 aa11.09□□□□□ -0.63
SYCP3-205ENST00000478238 MEIOBQ8N635 442 aa11.09□□□□□ -0.63
SYCP3-205ENST00000478238 SLC16A10Q8TF71 515 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms