RNA–Protein interactions for RNA: ENST00000478232.1

RCC1-211, Transcript of regulator of chromosome condensation 1, humanhuman

TSL 2

Gene RCC1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCC1-211ENST00000478232 CCDC125Q86Z20 511 aa19.73■□□□□ 0.75
RCC1-211ENST00000478232 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.73■□□□□ 0.75
RCC1-211ENST00000478232 CABP2Q9NPB3 220 aa19.72■□□□□ 0.75
RCC1-211ENST00000478232 BTG4Q9NY30 223 aa19.72■□□□□ 0.75
RCC1-211ENST00000478232 ALS2Q96Q42 1657 aa19.71■□□□□ 0.75
RCC1-211ENST00000478232 ITSN1Q15811 1721 aa19.71■□□□□ 0.75
RCC1-211ENST00000478232 SEPT12Q8IYM1 358 aa19.7■□□□□ 0.74
RCC1-211ENST00000478232 TRIM26Q12899 539 aaPredicted RBP19.69■□□□□ 0.74
RCC1-211ENST00000478232 PRDM11Q9NQV5 511 aa19.69■□□□□ 0.74
RCC1-211ENST00000478232 ABTB2Q8N961 1025 aa19.68■□□□□ 0.74
RCC1-211ENST00000478232 GLI3P10071 1580 aa19.68■□□□□ 0.74
RCC1-211ENST00000478232 EVC2Q86UK5 1308 aa19.68■□□□□ 0.74
RCC1-211ENST00000478232 ROCK2O75116 1388 aaKnown RBP19.68■□□□□ 0.74
RCC1-211ENST00000478232 NWD2Q9ULI1 1742 aa19.68■□□□□ 0.74
RCC1-211ENST00000478232 NUTM2GQ5VZR2 741 aa19.67■□□□□ 0.74
RCC1-211ENST00000478232 CABP1Q9NZU7 370 aa19.67■□□□□ 0.74
RCC1-211ENST00000478232 ABCA3Q99758 1704 aa19.67■□□□□ 0.74
RCC1-211ENST00000478232 PPIP5K1Q6PFW1 1433 aa19.67■□□□□ 0.74
RCC1-211ENST00000478232 NLRP13Q86W25 1043 aa19.65■□□□□ 0.74
RCC1-211ENST00000478232 BRD4O60885 1362 aaPredicted RBP19.65■□□□□ 0.74
RCC1-211ENST00000478232 ZC3H6P61129 1189 aaKnown RBP19.64■□□□□ 0.73
RCC1-211ENST00000478232 PLCH1Q4KWH8 1693 aa19.64■□□□□ 0.73
RCC1-211ENST00000478232 COL14A1Q05707 1796 aaKnown RBP19.63■□□□□ 0.73
RCC1-211ENST00000478232 TOPAZ1Q8N9V7 1692 aa19.63■□□□□ 0.73
RCC1-211ENST00000478232 KIAA0232Q92628 1395 aa19.63■□□□□ 0.73
RCC1-211ENST00000478232 KRT27Q7Z3Y8 459 aa19.63■□□□□ 0.73
RCC1-211ENST00000478232 TRPM1Q7Z4N2 1603 aa19.62■□□□□ 0.73
RCC1-211ENST00000478232 SPATA31A5Q5VU36 1347 aa19.62■□□□□ 0.73
RCC1-211ENST00000478232 SPATA31A7Q8IWB4 1347 aa19.62■□□□□ 0.73
RCC1-211ENST00000478232 CHRNA2Q15822 529 aa19.62■□□□□ 0.73
RCC1-211ENST00000478232 FAM98CQ17RN3 349 aaKnown RBP19.62■□□□□ 0.73
RCC1-211ENST00000478232 A0A0G2JS52 829 aa19.61■□□□□ 0.73
RCC1-211ENST00000478232 MYT1Q01538 1121 aa19.61■□□□□ 0.73
RCC1-211ENST00000478232 ZNF692Q9BU19 519 aaPredicted RBP19.61■□□□□ 0.73
RCC1-211ENST00000478232 TONSLQ96HA7 1378 aa19.6■□□□□ 0.73
RCC1-211ENST00000478232 QRICH2Q9H0J4 1663 aa19.6■□□□□ 0.73
RCC1-211ENST00000478232 GCP02774 474 aa19.59■□□□□ 0.73
RCC1-211ENST00000478232 EVA1CP58658 441 aa19.59■□□□□ 0.73
RCC1-211ENST00000478232 CARD11Q9BXL7 1154 aa19.59■□□□□ 0.73
RCC1-211ENST00000478232 USP19O94966 1318 aa19.58■□□□□ 0.73
RCC1-211ENST00000478232 NLRP6P59044 892 aa19.58■□□□□ 0.72
RCC1-211ENST00000478232 CRYBG1Q9Y4K1 1723 aa19.58■□□□□ 0.72
RCC1-211ENST00000478232 BLMP54132 1417 aaPredicted RBP19.58■□□□□ 0.72
RCC1-211ENST00000478232 SF3B2Q13435 895 aaKnown RBP19.57■□□□□ 0.72
RCC1-211ENST00000478232 STRN4Q9NRL3 753 aa19.57■□□□□ 0.72
RCC1-211ENST00000478232 USP6P35125 1406 aa19.57■□□□□ 0.72
RCC1-211ENST00000478232 CPDO75976 1380 aa19.57■□□□□ 0.72
RCC1-211ENST00000478232 NRAPQ86VF7 1730 aa19.56■□□□□ 0.72
RCC1-211ENST00000478232 SPATA31A1Q5TZJ5 1347 aa19.56■□□□□ 0.72
RCC1-211ENST00000478232 ZRANB1Q9UGI0 708 aa19.55■□□□□ 0.72
RCC1-211ENST00000478232 BRWD3Q6RI45 1802 aa19.53■□□□□ 0.72
RCC1-211ENST00000478232 EP400Q96L91 3159 aa19.53■□□□□ 0.72
RCC1-211ENST00000478232 SSH2Q76I76 1423 aa19.53■□□□□ 0.72
RCC1-211ENST00000478232 SBNO2Q9Y2G9 1366 aa19.53■□□□□ 0.72
RCC1-211ENST00000478232 PHRF1Q9P1Y6 1649 aaKnown RBP19.52■□□□□ 0.72
RCC1-211ENST00000478232 TTC21BQ7Z4L5 1316 aa19.51■□□□□ 0.71
RCC1-211ENST00000478232 BARGINQ6ZT62 677 aa19.51■□□□□ 0.71
RCC1-211ENST00000478232 LARP1Q6PKG0 1096 aaKnown RBP19.5■□□□□ 0.71
RCC1-211ENST00000478232 DEFB132Q7Z7B7 95 aa19.5■□□□□ 0.71
RCC1-211ENST00000478232 USP35Q9P2H5 1018 aa19.5■□□□□ 0.71
RCC1-211ENST00000478232 TTC21AQ8NDW8 1320 aa19.5■□□□□ 0.71
RCC1-211ENST00000478232 CAMTA1Q9Y6Y1 1673 aa19.49■□□□□ 0.71
RCC1-211ENST00000478232 KCNH5Q8NCM2 988 aa19.49■□□□□ 0.71
RCC1-211ENST00000478232 TCP11L2Q8N4U5 519 aa19.48■□□□□ 0.71
RCC1-211ENST00000478232 PUS7Q96PZ0 661 aaKnown RBP19.48■□□□□ 0.71
RCC1-211ENST00000478232 THRAP3Q9Y2W1 955 aaKnown RBP19.48■□□□□ 0.71
RCC1-211ENST00000478232 CPSF1Q10570 1443 aaKnown RBP19.48■□□□□ 0.71
RCC1-211ENST00000478232 NRKQ7Z2Y5 1582 aa19.48■□□□□ 0.71
RCC1-211ENST00000478232 AATKQ6ZMQ8 1374 aa19.47■□□□□ 0.71
RCC1-211ENST00000478232 KTN1Q86UP2 1357 aaKnown RBP19.47■□□□□ 0.71
RCC1-211ENST00000478232 SLC24A1O60721 1099 aa19.47■□□□□ 0.71
RCC1-211ENST00000478232 BAG6P46379 1132 aa19.47■□□□□ 0.71
RCC1-211ENST00000478232 FAM182BQ5T319 152 aa19.47■□□□□ 0.71
RCC1-211ENST00000478232 ZBTB7CA1YPR0 619 aa19.46■□□□□ 0.71
RCC1-211ENST00000478232 FAM196AQ6ZSG2 479 aa19.46■□□□□ 0.71
RCC1-211ENST00000478232 PDE3BQ13370 1112 aa19.45■□□□□ 0.7
RCC1-211ENST00000478232 TMC1Q8TDI8 760 aa19.45■□□□□ 0.7
RCC1-211ENST00000478232 ARHGEF25Q86VW2 580 aa19.44■□□□□ 0.7
RCC1-211ENST00000478232 SLIT3O75094 1523 aa19.44■□□□□ 0.7
RCC1-211ENST00000478232 THSD7AQ9UPZ6 1657 aa19.43■□□□□ 0.7
RCC1-211ENST00000478232 HDGFL2Q7Z4V5 671 aaPredicted RBP19.43■□□□□ 0.7
RCC1-211ENST00000478232 SLC12A5Q9H2X9 1139 aa19.43■□□□□ 0.7
RCC1-211ENST00000478232 LMO7Q8WWI1 1683 aa19.43■□□□□ 0.7
RCC1-211ENST00000478232 ST20-MTHFSA0A0A6YYL1 179 aa19.42■□□□□ 0.7
RCC1-211ENST00000478232 TERF2IPQ9NYB0 399 aa19.42■□□□□ 0.7
RCC1-211ENST00000478232 COL5A2P05997 1499 aaPredicted RBP19.41■□□□□ 0.7
RCC1-211ENST00000478232 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.41■□□□□ 0.7
RCC1-211ENST00000478232 AXIN2Q9Y2T1 843 aa19.41■□□□□ 0.7
RCC1-211ENST00000478232 CRB1P82279 1406 aa19.41■□□□□ 0.7
RCC1-211ENST00000478232 TOM1L2Q6ZVM7 507 aa19.4■□□□□ 0.7
RCC1-211ENST00000478232 TESK2Q96S53 571 aa19.4■□□□□ 0.7
RCC1-211ENST00000478232 PIK3C2AO00443 1686 aa19.4■□□□□ 0.7
RCC1-211ENST00000478232 SOX12O15370 315 aa19.39■□□□□ 0.69
RCC1-211ENST00000478232 EN1Q05925 392 aaPredicted RBP19.39■□□□□ 0.69
RCC1-211ENST00000478232 TIMELESSQ9UNS1 1208 aa19.39■□□□□ 0.69
RCC1-211ENST00000478232 C11orf95C9JLR9 678 aaPredicted RBP19.38■□□□□ 0.69
RCC1-211ENST00000478232 TRIM37O94972 964 aa19.38■□□□□ 0.69
RCC1-211ENST00000478232 AKAP12Q02952 1782 aa19.38■□□□□ 0.69
RCC1-211ENST00000478232 USP31Q70CQ4 1352 aa19.38■□□□□ 0.69
RCC1-211ENST00000478232 WDR17Q8IZU2 1322 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms