RNA–Protein interactions for RNA: ENST00000478230.5

SNX21-210, Transcript of sorting nexin family member 21, humanhuman

TSL 3

Gene SNX21, Length 907 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-210ENST00000478230 ZNF692Q9BU19 519 aaPredicted RBP21.3■■□□□ 1
SNX21-210ENST00000478230 ATAD2Q6PL18 1390 aa21.3■■□□□ 1
SNX21-210ENST00000478230 CDK12Q9NYV4 1490 aaPredicted RBP21.29■■□□□ 1
SNX21-210ENST00000478230 CABLES1Q8TDN4 633 aa21.29■■□□□ 1
SNX21-210ENST00000478230 CABP1Q9NZU7 370 aa21.29■■□□□ 1
SNX21-210ENST00000478230 PLEKHG5O94827 1062 aa21.27■■□□□ 1
SNX21-210ENST00000478230 UNC5CLQ8IV45 518 aa21.27■■□□□ 1
SNX21-210ENST00000478230 ABTB2Q8N961 1025 aa21.26■□□□□ 0.99
SNX21-210ENST00000478230 PUS7Q96PZ0 661 aaKnown RBP21.26■□□□□ 0.99
SNX21-210ENST00000478230 TRPM3Q9HCF6 1732 aaPredicted RBP21.26■□□□□ 0.99
SNX21-210ENST00000478230 TOPAZ1Q8N9V7 1692 aa21.25■□□□□ 0.99
SNX21-210ENST00000478230 NLRP13Q86W25 1043 aa21.25■□□□□ 0.99
SNX21-210ENST00000478230 MARF1Q9Y4F3 1742 aaKnown RBP21.24■□□□□ 0.99
SNX21-210ENST00000478230 ATRNO75882 1429 aa21.22■□□□□ 0.99
SNX21-210ENST00000478230 ALS2Q96Q42 1657 aa21.22■□□□□ 0.99
SNX21-210ENST00000478230 BCL9LQ86UU0 1499 aa21.21■□□□□ 0.99
SNX21-210ENST00000478230 SLIT2O94813 1529 aa21.21■□□□□ 0.99
SNX21-210ENST00000478230 GJD4Q96KN9 370 aaPredicted RBP21.21■□□□□ 0.99
SNX21-210ENST00000478230 FAM83GA6ND36 823 aa21.2■□□□□ 0.98
SNX21-210ENST00000478230 ST20-MTHFSA0A0A6YYL1 179 aa21.19■□□□□ 0.98
SNX21-210ENST00000478230 PRDM11Q9NQV5 511 aa21.19■□□□□ 0.98
SNX21-210ENST00000478230 USP6P35125 1406 aa21.19■□□□□ 0.98
SNX21-210ENST00000478230 VPS72Q15906 364 aa21.18■□□□□ 0.98
SNX21-210ENST00000478230 HDGFL2Q7Z4V5 671 aaPredicted RBP21.18■□□□□ 0.98
SNX21-210ENST00000478230 NUTM2GQ5VZR2 741 aa21.17■□□□□ 0.98
SNX21-210ENST00000478230 CCDC9Q9Y3X0 531 aaKnown RBP21.17■□□□□ 0.98
SNX21-210ENST00000478230 TTC21AQ8NDW8 1320 aa21.16■□□□□ 0.98
SNX21-210ENST00000478230 NLRP6P59044 892 aa21.16■□□□□ 0.98
SNX21-210ENST00000478230 CDCA8Q53HL2 280 aa21.16■□□□□ 0.98
SNX21-210ENST00000478230 TMC1Q8TDI8 760 aa21.16■□□□□ 0.98
SNX21-210ENST00000478230 TERF2IPQ9NYB0 399 aa21.16■□□□□ 0.98
SNX21-210ENST00000478230 TMF1P82094 1093 aa21.15■□□□□ 0.98
SNX21-210ENST00000478230 BTG4Q9NY30 223 aa21.15■□□□□ 0.98
SNX21-210ENST00000478230 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.15■□□□□ 0.98
SNX21-210ENST00000478230 KTN1Q86UP2 1357 aaKnown RBP21.14■□□□□ 0.98
SNX21-210ENST00000478230 NINLQ9Y2I6 1382 aa21.14■□□□□ 0.98
SNX21-210ENST00000478230 USP47Q96K76 1375 aa21.13■□□□□ 0.97
SNX21-210ENST00000478230 ABCA3Q99758 1704 aa21.13■□□□□ 0.97
SNX21-210ENST00000478230 NWD2Q9ULI1 1742 aa21.13■□□□□ 0.97
SNX21-210ENST00000478230 USP19O94966 1318 aa21.13■□□□□ 0.97
SNX21-210ENST00000478230 GCP02774 474 aa21.13■□□□□ 0.97
SNX21-210ENST00000478230 ZC3H6P61129 1189 aaKnown RBP21.13■□□□□ 0.97
SNX21-210ENST00000478230 TESK2Q96S53 571 aa21.13■□□□□ 0.97
SNX21-210ENST00000478230 TTC21BQ7Z4L5 1316 aa21.12■□□□□ 0.97
SNX21-210ENST00000478230 COL14A1Q05707 1796 aaKnown RBP21.12■□□□□ 0.97
SNX21-210ENST00000478230 RGS12O14924 1447 aa21.12■□□□□ 0.97
SNX21-210ENST00000478230 CPSF1Q10570 1443 aaKnown RBP21.12■□□□□ 0.97
SNX21-210ENST00000478230 KIAA0232Q92628 1395 aa21.11■□□□□ 0.97
SNX21-210ENST00000478230 KCNH5Q8NCM2 988 aa21.11■□□□□ 0.97
SNX21-210ENST00000478230 EVA1CP58658 441 aa21.1■□□□□ 0.97
SNX21-210ENST00000478230 SSH2Q76I76 1423 aa21.1■□□□□ 0.97
SNX21-210ENST00000478230 CPDO75976 1380 aa21.1■□□□□ 0.97
SNX21-210ENST00000478230 SLC12A5Q9H2X9 1139 aa21.08■□□□□ 0.97
SNX21-210ENST00000478230 ONECUT3O60422 494 aaPredicted RBP21.07■□□□□ 0.96
SNX21-210ENST00000478230 UPF1Q92900 1129 aaKnown RBP eCLIP21.07■□□□□ 0.96
SNX21-210ENST00000478230 PLCH1Q4KWH8 1693 aa21.07■□□□□ 0.96
SNX21-210ENST00000478230 CHRNA2Q15822 529 aa21.06■□□□□ 0.96
SNX21-210ENST00000478230 CRYBG1Q9Y4K1 1723 aa21.06■□□□□ 0.96
SNX21-210ENST00000478230 PHRF1Q9P1Y6 1649 aaKnown RBP21.04■□□□□ 0.96
SNX21-210ENST00000478230 SEPT12Q8IYM1 358 aa21.04■□□□□ 0.96
SNX21-210ENST00000478230 EDC4Q6P2E9 1401 aaKnown RBP21.04■□□□□ 0.96
SNX21-210ENST00000478230 SPATA31A5Q5VU36 1347 aa21.04■□□□□ 0.96
SNX21-210ENST00000478230 SPATA31A7Q8IWB4 1347 aa21.04■□□□□ 0.96
SNX21-210ENST00000478230 AKAP12Q02952 1782 aa21.03■□□□□ 0.96
SNX21-210ENST00000478230 A0A0G2JS52 829 aa21.03■□□□□ 0.96
SNX21-210ENST00000478230 MYT1Q01538 1121 aa21.03■□□□□ 0.96
SNX21-210ENST00000478230 CCDC125Q86Z20 511 aa21.03■□□□□ 0.96
SNX21-210ENST00000478230 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.03■□□□□ 0.96
SNX21-210ENST00000478230 STRN4Q9NRL3 753 aa21.03■□□□□ 0.96
SNX21-210ENST00000478230 EIF4G2P78344 907 aaKnown RBP eCLIP21.02■□□□□ 0.96
SNX21-210ENST00000478230 GLI3P10071 1580 aa21.01■□□□□ 0.95
SNX21-210ENST00000478230 NRKQ7Z2Y5 1582 aa21.01■□□□□ 0.95
SNX21-210ENST00000478230 AATKQ6ZMQ8 1374 aa21■□□□□ 0.95
SNX21-210ENST00000478230 USP31Q70CQ4 1352 aa21■□□□□ 0.95
SNX21-210ENST00000478230 ZBTB7CA1YPR0 619 aa21■□□□□ 0.95
SNX21-210ENST00000478230 SLIT3O75094 1523 aa20.99■□□□□ 0.95
SNX21-210ENST00000478230 FAM98CQ17RN3 349 aaKnown RBP20.99■□□□□ 0.95
SNX21-210ENST00000478230 A0A1W2PP64 1363 aa20.98■□□□□ 0.95
SNX21-210ENST00000478230 KRT27Q7Z3Y8 459 aa20.98■□□□□ 0.95
SNX21-210ENST00000478230 THRAP3Q9Y2W1 955 aaKnown RBP20.98■□□□□ 0.95
SNX21-210ENST00000478230 CD163L1Q9NR16 1453 aa20.98■□□□□ 0.95
SNX21-210ENST00000478230 SPATA31A1Q5TZJ5 1347 aa20.98■□□□□ 0.95
SNX21-210ENST00000478230 NRAPQ86VF7 1730 aa20.98■□□□□ 0.95
SNX21-210ENST00000478230 ANKRD36BQ8N2N9 1353 aa20.97■□□□□ 0.95
SNX21-210ENST00000478230 PIK3C2AO00443 1686 aa20.97■□□□□ 0.95
SNX21-210ENST00000478230 ARHGEF25Q86VW2 580 aa20.97■□□□□ 0.95
SNX21-210ENST00000478230 MON2Q7Z3U7 1717 aa20.97■□□□□ 0.95
SNX21-210ENST00000478230 NME9Q86XW9 330 aa20.96■□□□□ 0.95
SNX21-210ENST00000478230 BARGINQ6ZT62 677 aa20.95■□□□□ 0.94
SNX21-210ENST00000478230 TCP11L2Q8N4U5 519 aa20.95■□□□□ 0.94
SNX21-210ENST00000478230 CAMTA1Q9Y6Y1 1673 aa20.94■□□□□ 0.94
SNX21-210ENST00000478230 SOX12O15370 315 aa20.94■□□□□ 0.94
SNX21-210ENST00000478230 COG3Q96JB2 828 aa20.94■□□□□ 0.94
SNX21-210ENST00000478230 SF3B2Q13435 895 aaKnown RBP20.93■□□□□ 0.94
SNX21-210ENST00000478230 LARP1Q6PKG0 1096 aaKnown RBP20.93■□□□□ 0.94
SNX21-210ENST00000478230 USP35Q9P2H5 1018 aa20.92■□□□□ 0.94
SNX21-210ENST00000478230 TOM1L2Q6ZVM7 507 aa20.91■□□□□ 0.94
SNX21-210ENST00000478230 LMO7Q8WWI1 1683 aa20.9■□□□□ 0.94
SNX21-210ENST00000478230 COL5A2P05997 1499 aaPredicted RBP20.9■□□□□ 0.94
SNX21-210ENST00000478230 CRB1P82279 1406 aa20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms