RNA–Protein interactions for RNA: ENST00000477890.6

CPSF7-211, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,234 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-211ENST00000477890 COL14A1Q05707 1796 aaKnown RBP17.17■□□□□ 0.34
CPSF7-211ENST00000477890 ITSN1Q15811 1721 aa17.16■□□□□ 0.34
CPSF7-211ENST00000477890 PAK3O75914 559 aaPredicted RBP17.16■□□□□ 0.34
CPSF7-211ENST00000477890 SF3B2Q13435 895 aaKnown RBP17.16■□□□□ 0.34
CPSF7-211ENST00000477890 KRT27Q7Z3Y8 459 aa17.16■□□□□ 0.34
CPSF7-211ENST00000477890 DEFB132Q7Z7B7 95 aa17.16■□□□□ 0.34
CPSF7-211ENST00000477890 CRYBG1Q9Y4K1 1723 aa17.15■□□□□ 0.34
CPSF7-211ENST00000477890 ATP7BP35670 1465 aa17.14■□□□□ 0.33
CPSF7-211ENST00000477890 FAM98CQ17RN3 349 aaKnown RBP17.14■□□□□ 0.33
CPSF7-211ENST00000477890 NUDT16Q96DE0 195 aaKnown RBP17.13■□□□□ 0.33
CPSF7-211ENST00000477890 PRDM11Q9NQV5 511 aa17.11■□□□□ 0.33
CPSF7-211ENST00000477890 CDK19Q9BWU1 502 aa17.1■□□□□ 0.33
CPSF7-211ENST00000477890 KIAA1210Q9ULL0 1709 aa17.1■□□□□ 0.33
CPSF7-211ENST00000477890 SPATA31A5Q5VU36 1347 aa17.09■□□□□ 0.33
CPSF7-211ENST00000477890 SPATA31A7Q8IWB4 1347 aa17.09■□□□□ 0.33
CPSF7-211ENST00000477890 SRCAPQ6ZRS2 3230 aa17.09■□□□□ 0.33
CPSF7-211ENST00000477890 TOPAZ1Q8N9V7 1692 aa17.08■□□□□ 0.32
CPSF7-211ENST00000477890 PHRF1Q9P1Y6 1649 aaKnown RBP17.08■□□□□ 0.32
CPSF7-211ENST00000477890 KIAA0232Q92628 1395 aa17.07■□□□□ 0.32
CPSF7-211ENST00000477890 NUTM2GQ5VZR2 741 aa17.07■□□□□ 0.32
CPSF7-211ENST00000477890 ACEP12821 1306 aa17.06■□□□□ 0.32
CPSF7-211ENST00000477890 BAG6P46379 1132 aa17.06■□□□□ 0.32
CPSF7-211ENST00000477890 CHRNA2Q15822 529 aa17.06■□□□□ 0.32
CPSF7-211ENST00000477890 POLR3AO14802 1390 aaPredicted RBP17.05■□□□□ 0.32
CPSF7-211ENST00000477890 THSD7AQ9UPZ6 1657 aa17.05■□□□□ 0.32
CPSF7-211ENST00000477890 NBPF1Q3BBV0 1214 aa17.05■□□□□ 0.32
CPSF7-211ENST00000477890 FAM182BQ5T319 152 aa17.05■□□□□ 0.32
CPSF7-211ENST00000477890 CCDC61Q9Y6R9 512 aa17.05■□□□□ 0.32
CPSF7-211ENST00000477890 RGPD1P0DJD0 1748 aa17.04■□□□□ 0.32
CPSF7-211ENST00000477890 ZC3H6P61129 1189 aaKnown RBP17.04■□□□□ 0.32
CPSF7-211ENST00000477890 NBPF8Q3BBV2 869 aa17.04■□□□□ 0.32
CPSF7-211ENST00000477890 STRN4Q9NRL3 753 aa17.04■□□□□ 0.32
CPSF7-211ENST00000477890 SPATA31A1Q5TZJ5 1347 aa17.02■□□□□ 0.32
CPSF7-211ENST00000477890 PLEKHG3A1L390 1219 aa17.02■□□□□ 0.32
CPSF7-211ENST00000477890 SRPK2P78362 688 aaKnown RBP17.01■□□□□ 0.31
CPSF7-211ENST00000477890 EN1Q05925 392 aaPredicted RBP17.01■□□□□ 0.31
CPSF7-211ENST00000477890 ABTB2Q8N961 1025 aa17.01■□□□□ 0.31
CPSF7-211ENST00000477890 NRKQ7Z2Y5 1582 aa17.01■□□□□ 0.31
CPSF7-211ENST00000477890 PSDA5PKW4 1024 aaPredicted RBP17■□□□□ 0.31
CPSF7-211ENST00000477890 USP35Q9P2H5 1018 aa17■□□□□ 0.31
CPSF7-211ENST00000477890 CENPJQ9HC77 1338 aaPredicted RBP16.99■□□□□ 0.31
CPSF7-211ENST00000477890 TNS1Q9HBL0 1735 aaKnown RBP16.99■□□□□ 0.31
CPSF7-211ENST00000477890 PPIP5K1Q6PFW1 1433 aa16.99■□□□□ 0.31
CPSF7-211ENST00000477890 EVA1CP58658 441 aa16.99■□□□□ 0.31
CPSF7-211ENST00000477890 QRICH2Q9H0J4 1663 aa16.98■□□□□ 0.31
CPSF7-211ENST00000477890 CABP2Q9NPB3 220 aa16.98■□□□□ 0.31
CPSF7-211ENST00000477890 LRP5O75197 1615 aa16.98■□□□□ 0.31
CPSF7-211ENST00000477890 SSH2Q76I76 1423 aa16.97■□□□□ 0.31
CPSF7-211ENST00000477890 CAMTA1Q9Y6Y1 1673 aa16.97■□□□□ 0.31
CPSF7-211ENST00000477890 FAM196AQ6ZSG2 479 aa16.96■□□□□ 0.31
CPSF7-211ENST00000477890 NLRP13Q86W25 1043 aa16.96■□□□□ 0.31
CPSF7-211ENST00000477890 DISP2A7MBM2 1401 aa16.96■□□□□ 0.3
CPSF7-211ENST00000477890 USP19O94966 1318 aa16.96■□□□□ 0.3
CPSF7-211ENST00000477890 LMO7Q8WWI1 1683 aa16.95■□□□□ 0.3
CPSF7-211ENST00000477890 CPDO75976 1380 aa16.95■□□□□ 0.3
CPSF7-211ENST00000477890 TRIM37O94972 964 aa16.95■□□□□ 0.3
CPSF7-211ENST00000477890 LARP1Q6PKG0 1096 aaKnown RBP16.95■□□□□ 0.3
CPSF7-211ENST00000477890 BARGINQ6ZT62 677 aa16.94■□□□□ 0.3
CPSF7-211ENST00000477890 GCP02774 474 aa16.93■□□□□ 0.3
CPSF7-211ENST00000477890 PDE3BQ13370 1112 aa16.93■□□□□ 0.3
CPSF7-211ENST00000477890 EZH2Q15910 746 aaKnown RBP16.93■□□□□ 0.3
CPSF7-211ENST00000477890 L3MBTL2Q969R5 705 aa16.93■□□□□ 0.3
CPSF7-211ENST00000477890 CABP1Q9NZU7 370 aa16.93■□□□□ 0.3
CPSF7-211ENST00000477890 BRD4O60885 1362 aaPredicted RBP16.92■□□□□ 0.3
CPSF7-211ENST00000477890 R3HDM1Q15032 1099 aaKnown RBP16.92■□□□□ 0.3
CPSF7-211ENST00000477890 TCP11L2Q8N4U5 519 aa16.92■□□□□ 0.3
CPSF7-211ENST00000477890 USP6P35125 1406 aa16.91■□□□□ 0.3
CPSF7-211ENST00000477890 ZBTB7CA1YPR0 619 aa16.91■□□□□ 0.3
CPSF7-211ENST00000477890 TRPM1Q7Z4N2 1603 aa16.9■□□□□ 0.3
CPSF7-211ENST00000477890 APBA3O96018 575 aa16.9■□□□□ 0.3
CPSF7-211ENST00000477890 NLRP6P59044 892 aa16.9■□□□□ 0.3
CPSF7-211ENST00000477890 CAMKK2Q96RR4 588 aa16.9■□□□□ 0.3
CPSF7-211ENST00000477890 COL5A2P05997 1499 aaPredicted RBP16.9■□□□□ 0.3
CPSF7-211ENST00000477890 SIN3AQ96ST3 1273 aa16.89■□□□□ 0.29
CPSF7-211ENST00000477890 THRAP3Q9Y2W1 955 aaKnown RBP16.89■□□□□ 0.29
CPSF7-211ENST00000477890 EVC2Q86UK5 1308 aa16.89■□□□□ 0.29
CPSF7-211ENST00000477890 PARP4Q9UKK3 1724 aaKnown RBP16.87■□□□□ 0.29
CPSF7-211ENST00000477890 SLIT3O75094 1523 aa16.87■□□□□ 0.29
CPSF7-211ENST00000477890 PIK3C2AO00443 1686 aa16.87■□□□□ 0.29
CPSF7-211ENST00000477890 PARD3Q8TEW0 1356 aa16.87■□□□□ 0.29
CPSF7-211ENST00000477890 CRB1P82279 1406 aa16.87■□□□□ 0.29
CPSF7-211ENST00000477890 NEUROD1Q13562 356 aa16.86■□□□□ 0.29
CPSF7-211ENST00000477890 ROCK2O75116 1388 aaKnown RBP16.86■□□□□ 0.29
CPSF7-211ENST00000477890 RREB1Q92766 1687 aa16.85■□□□□ 0.29
CPSF7-211ENST00000477890 AATKQ6ZMQ8 1374 aa16.85■□□□□ 0.29
CPSF7-211ENST00000477890 NUP188Q5SRE5 1749 aa16.84■□□□□ 0.29
CPSF7-211ENST00000477890 COL18A1P39060 1754 aa16.83■□□□□ 0.28
CPSF7-211ENST00000477890 AKAP12Q02952 1782 aa16.83■□□□□ 0.28
CPSF7-211ENST00000477890 TOM1L2Q6ZVM7 507 aa16.83■□□□□ 0.28
CPSF7-211ENST00000477890 LRRC37A3O60309 1634 aa16.81■□□□□ 0.28
CPSF7-211ENST00000477890 TTC21BQ7Z4L5 1316 aa16.81■□□□□ 0.28
CPSF7-211ENST00000477890 ZNF692Q9BU19 519 aaPredicted RBP16.81■□□□□ 0.28
CPSF7-211ENST00000477890 RGPD5Q99666 1765 aa16.81■□□□□ 0.28
CPSF7-211ENST00000477890 OVOS2A0A0G2JMS6 1433 aa16.8■□□□□ 0.28
CPSF7-211ENST00000477890 OVOS2A0A0J9YW53 1432 aa16.8■□□□□ 0.28
CPSF7-211ENST00000477890 CPSF1Q10570 1443 aaKnown RBP16.8■□□□□ 0.28
CPSF7-211ENST00000477890 OVOS2Q6IE36 1432 aa16.8■□□□□ 0.28
CPSF7-211ENST00000477890 WNK3Q9BYP7 1800 aa16.8■□□□□ 0.28
CPSF7-211ENST00000477890 PEAK1Q9H792 1746 aa16.8■□□□□ 0.28
CPSF7-211ENST00000477890 C11orf95C9JLR9 678 aaPredicted RBP16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms