RNA–Protein interactions for RNA: ENST00000477087.1

CDKN1B-204, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

TSL 3

Gene CDKN1B, Length 453 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-204ENST00000477087 LCE2BO14633 110 aa10.69□□□□□ -0.7
CDKN1B-204ENST00000477087 RTL5Q5HYW3 569 aaPredicted RBP10.68□□□□□ -0.7
CDKN1B-204ENST00000477087 PLEKHG3A1L390 1219 aa10.67□□□□□ -0.7
CDKN1B-204ENST00000477087 MYT1Q01538 1121 aa10.67□□□□□ -0.7
CDKN1B-204ENST00000477087 LINC01559Q495D7 138 aa10.67□□□□□ -0.7
CDKN1B-204ENST00000477087 EHBP1Q8NDI1 1231 aa10.67□□□□□ -0.7
CDKN1B-204ENST00000477087 BAP1Q92560 729 aa10.66□□□□□ -0.7
CDKN1B-204ENST00000477087 SH3BP2P78314 561 aa10.65□□□□□ -0.7
CDKN1B-204ENST00000477087 MAP10Q9P2G4 905 aa10.65□□□□□ -0.7
CDKN1B-204ENST00000477087 PER1O15534 1290 aaPredicted RBP10.64□□□□□ -0.71
CDKN1B-204ENST00000477087 F12P00748 615 aaPredicted RBP10.64□□□□□ -0.71
CDKN1B-204ENST00000477087 PROCA1Q8NCQ7 364 aaPredicted RBP10.64□□□□□ -0.71
CDKN1B-204ENST00000477087 ZNF511Q8NB15 262 aa10.63□□□□□ -0.71
CDKN1B-204ENST00000477087 J3QL48 77 aa10.61□□□□□ -0.71
CDKN1B-204ENST00000477087 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.61□□□□□ -0.71
CDKN1B-204ENST00000477087 ALDH1A1P00352 501 aa10.6□□□□□ -0.71
CDKN1B-204ENST00000477087 AVPP01185 164 aa10.6□□□□□ -0.71
CDKN1B-204ENST00000477087 SMPD1P17405 629 aa10.6□□□□□ -0.71
CDKN1B-204ENST00000477087 BRPF1P55201 1214 aaPredicted RBP10.6□□□□□ -0.71
CDKN1B-204ENST00000477087 CTC1Q2NKJ3 1217 aa10.6□□□□□ -0.71
CDKN1B-204ENST00000477087 ARMC2Q8NEN0 867 aa10.6□□□□□ -0.71
CDKN1B-204ENST00000477087 IL27Q8NEV9 243 aa10.6□□□□□ -0.71
CDKN1B-204ENST00000477087 PCMTD1Q96MG8 357 aaPredicted RBP10.6□□□□□ -0.71
CDKN1B-204ENST00000477087 VARSP26640 1264 aaKnown RBP10.59□□□□□ -0.71
CDKN1B-204ENST00000477087 AAASQ9NRG9 546 aa10.59□□□□□ -0.71
CDKN1B-204ENST00000477087 AXIN1O15169 862 aa10.58□□□□□ -0.72
CDKN1B-204ENST00000477087 ST8SIA5O15466 376 aa10.58□□□□□ -0.72
CDKN1B-204ENST00000477087 CTDSPL2Q05D32 466 aa10.58□□□□□ -0.72
CDKN1B-204ENST00000477087 AGERQ15109 404 aa10.58□□□□□ -0.72
CDKN1B-204ENST00000477087 PPP2R2DQ66LE6 453 aa10.58□□□□□ -0.72
CDKN1B-204ENST00000477087 ZNF787Q6DD87 383 aa10.58□□□□□ -0.72
CDKN1B-204ENST00000477087 WASF2Q9Y6W5 498 aa10.58□□□□□ -0.72
CDKN1B-204ENST00000477087 ABCC9O60706 1549 aa10.58□□□□□ -0.72
CDKN1B-204ENST00000477087 NACADO15069 1562 aa10.57□□□□□ -0.72
CDKN1B-204ENST00000477087 SIAH2O43255 324 aa10.57□□□□□ -0.72
CDKN1B-204ENST00000477087 CRIPAKQ8N1N5 446 aa10.57□□□□□ -0.72
CDKN1B-204ENST00000477087 GOPCQ9HD26 462 aa10.57□□□□□ -0.72
CDKN1B-204ENST00000477087 AP1G2O75843 785 aa10.56□□□□□ -0.72
CDKN1B-204ENST00000477087 NBPF14Q5TI25 921 aa10.56□□□□□ -0.72
CDKN1B-204ENST00000477087 FAM174AQ8TBP5 190 aa10.55□□□□□ -0.72
CDKN1B-204ENST00000477087 SMCPP49901 116 aaPredicted RBP10.54□□□□□ -0.72
CDKN1B-204ENST00000477087 FBXO31Q5XUX0 539 aaPredicted RBP10.54□□□□□ -0.72
CDKN1B-204ENST00000477087 BPHLQ86WA6 291 aaPredicted RBP10.54□□□□□ -0.72
CDKN1B-204ENST00000477087 HPS1Q92902 700 aa10.54□□□□□ -0.72
CDKN1B-204ENST00000477087 FOXJ1Q92949 421 aa10.54□□□□□ -0.72
CDKN1B-204ENST00000477087 TLL2Q9Y6L7 1015 aa10.54□□□□□ -0.72
CDKN1B-204ENST00000477087 LRRN4Q8WUT4 740 aa10.53□□□□□ -0.72
CDKN1B-204ENST00000477087 RFC5P40937 340 aa10.51□□□□□ -0.73
CDKN1B-204ENST00000477087 GPKOWQ92917 476 aaPredicted RBP eCLIP10.51□□□□□ -0.73
CDKN1B-204ENST00000477087 MPNDQ8N594 471 aa10.5□□□□□ -0.73
CDKN1B-204ENST00000477087 ARID5BQ14865 1188 aa10.49□□□□□ -0.73
CDKN1B-204ENST00000477087 USP17L8P0C7I0 530 aa10.48□□□□□ -0.73
CDKN1B-204ENST00000477087 NR6A1Q15406 480 aa10.48□□□□□ -0.73
CDKN1B-204ENST00000477087 PNMA1Q8ND90 353 aa10.48□□□□□ -0.73
CDKN1B-204ENST00000477087 DACH1Q9UI36 760 aa10.48□□□□□ -0.73
CDKN1B-204ENST00000477087 FKBPLQ9UIM3 349 aa10.48□□□□□ -0.73
CDKN1B-204ENST00000477087 MAGEB6P1A0A0J9YX57 407 aa10.47□□□□□ -0.73
CDKN1B-204ENST00000477087 TMEM259Q4ZIN3 620 aa10.47□□□□□ -0.73
CDKN1B-204ENST00000477087 C4orf48Q5BLP8 95 aa10.47□□□□□ -0.73
CDKN1B-204ENST00000477087 NNTQ13423 1086 aa10.46□□□□□ -0.73
CDKN1B-204ENST00000477087 SH3BP5LQ7L8J4 393 aa10.46□□□□□ -0.73
CDKN1B-204ENST00000477087 ZC3H4Q9UPT8 1303 aaKnown RBP10.45□□□□□ -0.74
CDKN1B-204ENST00000477087 ADH1CP00326 375 aa10.45□□□□□ -0.74
CDKN1B-204ENST00000477087 SH3RF1Q7Z6J0 888 aa10.45□□□□□ -0.74
CDKN1B-204ENST00000477087 CARD14Q9BXL6 1004 aa10.45□□□□□ -0.74
CDKN1B-204ENST00000477087 ATP13A2Q9NQ11 1180 aa10.45□□□□□ -0.74
CDKN1B-204ENST00000477087 POTECB2RU33 542 aa10.44□□□□□ -0.74
CDKN1B-204ENST00000477087 CAPN5O15484 640 aaPredicted RBP10.44□□□□□ -0.74
CDKN1B-204ENST00000477087 PRKCSHP14314 528 aaPredicted RBP10.44□□□□□ -0.74
CDKN1B-204ENST00000477087 PDXDC2PQ6P474 469 aa10.44□□□□□ -0.74
CDKN1B-204ENST00000477087 CDK15Q96Q40 435 aa10.44□□□□□ -0.74
CDKN1B-204ENST00000477087 ARHGAP9Q9BRR9 750 aa10.44□□□□□ -0.74
CDKN1B-204ENST00000477087 GMPR2Q9P2T1 348 aaKnown RBP10.44□□□□□ -0.74
CDKN1B-204ENST00000477087 C1QTNF2Q9BXJ5 285 aa10.43□□□□□ -0.74
CDKN1B-204ENST00000477087 SENP2Q9HC62 589 aa10.42□□□□□ -0.74
CDKN1B-204ENST00000477087 HMX1Q9NP08 348 aaPredicted RBP10.42□□□□□ -0.74
CDKN1B-204ENST00000477087 RB1CC1Q8TDY2 1594 aa10.41□□□□□ -0.74
CDKN1B-204ENST00000477087 C11orf95C9JLR9 678 aaPredicted RBP10.41□□□□□ -0.74
CDKN1B-204ENST00000477087 PTK2Q05397 1052 aa10.41□□□□□ -0.74
CDKN1B-204ENST00000477087 NR5A1Q13285 461 aa10.41□□□□□ -0.74
CDKN1B-204ENST00000477087 VASH1Q7L8A9 365 aaPredicted RBP10.41□□□□□ -0.74
CDKN1B-204ENST00000477087 ZBTB33Q86T24 672 aa10.41□□□□□ -0.74
CDKN1B-204ENST00000477087 WDR4P57081 412 aaKnown RBP10.4□□□□□ -0.74
CDKN1B-204ENST00000477087 TRMT44Q8IYL2 757 aaKnown RBP10.4□□□□□ -0.74
CDKN1B-204ENST00000477087 EPS8L1Q8TE68 723 aa10.4□□□□□ -0.74
CDKN1B-204ENST00000477087 ERFEQ4G0M1 354 aa10.39□□□□□ -0.75
CDKN1B-204ENST00000477087 KIFC2Q96AC6 838 aa10.39□□□□□ -0.75
CDKN1B-204ENST00000477087 MAP4K5Q9Y4K4 846 aa10.39□□□□□ -0.75
CDKN1B-204ENST00000477087 FSHRP23945 695 aa10.38□□□□□ -0.75
CDKN1B-204ENST00000477087 SLC10A4Q96EP9 437 aa10.38□□□□□ -0.75
CDKN1B-204ENST00000477087 GPSM3Q9Y4H4 160 aa10.38□□□□□ -0.75
CDKN1B-204ENST00000477087 TIMP2P16035 220 aa10.36□□□□□ -0.75
CDKN1B-204ENST00000477087 GRM5P41594 1212 aa10.36□□□□□ -0.75
CDKN1B-204ENST00000477087 CDV3Q9UKY7 258 aaKnown RBP10.36□□□□□ -0.75
CDKN1B-204ENST00000477087 ZIC2O95409 532 aaPredicted RBP10.35□□□□□ -0.75
CDKN1B-204ENST00000477087 BMP1P13497 986 aa10.35□□□□□ -0.75
CDKN1B-204ENST00000477087 ZNF775Q96BV0 537 aaPredicted RBP10.35□□□□□ -0.75
CDKN1B-204ENST00000477087 TRIM47Q96LD4 638 aa10.35□□□□□ -0.75
CDKN1B-204ENST00000477087 NR3C2P08235 984 aa10.34□□□□□ -0.75
CDKN1B-204ENST00000477087 BANK1Q8NDB2 785 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms