RNA–Protein interactions for RNA: ENST00000476658.5

DFFA-203, Transcript of DNA fragmentation factor subunit alpha, humanhuman

TSL 3

Gene DFFA, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFA-203ENST00000476658 NGLY1Q96IV0 654 aa21.12■□□□□ 0.97
DFFA-203ENST00000476658 AKAP12Q02952 1782 aa21.12■□□□□ 0.97
DFFA-203ENST00000476658 AFF2P51816 1311 aa21.11■□□□□ 0.97
DFFA-203ENST00000476658 ZNF772Q68DY9 489 aaPredicted RBP21.1■□□□□ 0.97
DFFA-203ENST00000476658 TMF1P82094 1093 aa21.09■□□□□ 0.97
DFFA-203ENST00000476658 POTEAQ6S8J7 498 aa21.09■□□□□ 0.97
DFFA-203ENST00000476658 TMC1Q8TDI8 760 aa21.09■□□□□ 0.97
DFFA-203ENST00000476658 USP6P35125 1406 aa21.09■□□□□ 0.97
DFFA-203ENST00000476658 CRYBG1Q9Y4K1 1723 aa21.07■□□□□ 0.96
DFFA-203ENST00000476658 NUTM2GQ5VZR2 741 aa21.07■□□□□ 0.96
DFFA-203ENST00000476658 ABTB2Q8N961 1025 aa21.07■□□□□ 0.96
DFFA-203ENST00000476658 PUS7Q96PZ0 661 aaKnown RBP21.07■□□□□ 0.96
DFFA-203ENST00000476658 ZNF692Q9BU19 519 aaPredicted RBP21.06■□□□□ 0.96
DFFA-203ENST00000476658 BRD4O60885 1362 aaPredicted RBP21.06■□□□□ 0.96
DFFA-203ENST00000476658 MON2Q7Z3U7 1717 aa21.05■□□□□ 0.96
DFFA-203ENST00000476658 PHRF1Q9P1Y6 1649 aaKnown RBP21.04■□□□□ 0.96
DFFA-203ENST00000476658 EIF4G2P78344 907 aaKnown RBP eCLIP21.04■□□□□ 0.96
DFFA-203ENST00000476658 SLC12A5Q9H2X9 1139 aa21.04■□□□□ 0.96
DFFA-203ENST00000476658 KTN1Q86UP2 1357 aaKnown RBP21.04■□□□□ 0.96
DFFA-203ENST00000476658 CPSF1Q10570 1443 aaKnown RBP21.04■□□□□ 0.96
DFFA-203ENST00000476658 USP21Q9UK80 565 aa21.03■□□□□ 0.96
DFFA-203ENST00000476658 CDCA8Q53HL2 280 aa21.02■□□□□ 0.96
DFFA-203ENST00000476658 HDGFL2Q7Z4V5 671 aaPredicted RBP21.02■□□□□ 0.96
DFFA-203ENST00000476658 NRKQ7Z2Y5 1582 aa21.02■□□□□ 0.95
DFFA-203ENST00000476658 HSPA5P11021 654 aaKnown RBP21.01■□□□□ 0.95
DFFA-203ENST00000476658 FNBP4Q8N3X1 1017 aaPredicted RBP21.01■□□□□ 0.95
DFFA-203ENST00000476658 PIK3C2AO00443 1686 aa21.01■□□□□ 0.95
DFFA-203ENST00000476658 PLCH1Q4KWH8 1693 aa21.01■□□□□ 0.95
DFFA-203ENST00000476658 SSH2Q76I76 1423 aa21.01■□□□□ 0.95
DFFA-203ENST00000476658 CD163L1Q9NR16 1453 aa21.01■□□□□ 0.95
DFFA-203ENST00000476658 NINLQ9Y2I6 1382 aa21■□□□□ 0.95
DFFA-203ENST00000476658 NLRP13Q86W25 1043 aa21■□□□□ 0.95
DFFA-203ENST00000476658 QTRT2Q9H974 415 aaKnown RBP21■□□□□ 0.95
DFFA-203ENST00000476658 TERF2IPQ9NYB0 399 aa21■□□□□ 0.95
DFFA-203ENST00000476658 TTC21BQ7Z4L5 1316 aa21■□□□□ 0.95
DFFA-203ENST00000476658 NLRP6P59044 892 aa20.98■□□□□ 0.95
DFFA-203ENST00000476658 TTC21AQ8NDW8 1320 aa20.98■□□□□ 0.95
DFFA-203ENST00000476658 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.98■□□□□ 0.95
DFFA-203ENST00000476658 NWD2Q9ULI1 1742 aa20.98■□□□□ 0.95
DFFA-203ENST00000476658 A0A1W2PP64 1363 aa20.97■□□□□ 0.95
DFFA-203ENST00000476658 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.97■□□□□ 0.95
DFFA-203ENST00000476658 SLIT2O94813 1529 aa20.97■□□□□ 0.95
DFFA-203ENST00000476658 COL14A1Q05707 1796 aaKnown RBP20.97■□□□□ 0.95
DFFA-203ENST00000476658 BCL9LQ86UU0 1499 aa20.96■□□□□ 0.95
DFFA-203ENST00000476658 FAM83GA6ND36 823 aa20.96■□□□□ 0.95
DFFA-203ENST00000476658 RXRBP28702 533 aa20.96■□□□□ 0.95
DFFA-203ENST00000476658 PRDM11Q9NQV5 511 aa20.96■□□□□ 0.95
DFFA-203ENST00000476658 TRPC5Q9UL62 973 aaPredicted RBP20.96■□□□□ 0.95
DFFA-203ENST00000476658 USP19O94966 1318 aa20.96■□□□□ 0.95
DFFA-203ENST00000476658 ZC3H6P61129 1189 aaKnown RBP20.95■□□□□ 0.94
DFFA-203ENST00000476658 POLR3GLQ9BT43 218 aa20.95■□□□□ 0.94
DFFA-203ENST00000476658 UNC5CLQ8IV45 518 aa20.94■□□□□ 0.94
DFFA-203ENST00000476658 KIAA0232Q92628 1395 aa20.94■□□□□ 0.94
DFFA-203ENST00000476658 EDC4Q6P2E9 1401 aaKnown RBP20.94■□□□□ 0.94
DFFA-203ENST00000476658 MYOM1P52179 1685 aa20.93■□□□□ 0.94
DFFA-203ENST00000476658 RBM6P78332 1123 aaKnown RBP20.93■□□□□ 0.94
DFFA-203ENST00000476658 ATRNO75882 1429 aa20.93■□□□□ 0.94
DFFA-203ENST00000476658 GCP02774 474 aa20.92■□□□□ 0.94
DFFA-203ENST00000476658 ANKRD36BQ8N2N9 1353 aa20.92■□□□□ 0.94
DFFA-203ENST00000476658 SLIT3O75094 1523 aa20.91■□□□□ 0.94
DFFA-203ENST00000476658 CHRNA2Q15822 529 aa20.91■□□□□ 0.94
DFFA-203ENST00000476658 NRAPQ86VF7 1730 aa20.91■□□□□ 0.94
DFFA-203ENST00000476658 BTG4Q9NY30 223 aa20.91■□□□□ 0.94
DFFA-203ENST00000476658 NME9Q86XW9 330 aa20.9■□□□□ 0.94
DFFA-203ENST00000476658 ZBTB7CA1YPR0 619 aa20.89■□□□□ 0.93
DFFA-203ENST00000476658 ZRANB1Q9UGI0 708 aa20.89■□□□□ 0.93
DFFA-203ENST00000476658 SOCS7O14512 581 aa20.88■□□□□ 0.93
DFFA-203ENST00000476658 SOX12O15370 315 aa20.88■□□□□ 0.93
DFFA-203ENST00000476658 CCDC9Q9Y3X0 531 aaKnown RBP20.88■□□□□ 0.93
DFFA-203ENST00000476658 USP54Q70EL1 1684 aa20.88■□□□□ 0.93
DFFA-203ENST00000476658 CPDO75976 1380 aa20.87■□□□□ 0.93
DFFA-203ENST00000476658 GJD4Q96KN9 370 aaPredicted RBP20.87■□□□□ 0.93
DFFA-203ENST00000476658 CDK12Q9NYV4 1490 aaPredicted RBP20.87■□□□□ 0.93
DFFA-203ENST00000476658 USP31Q70CQ4 1352 aa20.86■□□□□ 0.93
DFFA-203ENST00000476658 KCNH5Q8NCM2 988 aa20.86■□□□□ 0.93
DFFA-203ENST00000476658 VPS72Q15906 364 aa20.85■□□□□ 0.93
DFFA-203ENST00000476658 RGS12O14924 1447 aa20.84■□□□□ 0.93
DFFA-203ENST00000476658 GLI3P10071 1580 aa20.84■□□□□ 0.93
DFFA-203ENST00000476658 LMO7Q8WWI1 1683 aa20.83■□□□□ 0.93
DFFA-203ENST00000476658 KIF20BQ96Q89 1820 aa20.83■□□□□ 0.93
DFFA-203ENST00000476658 STRN4Q9NRL3 753 aa20.83■□□□□ 0.93
DFFA-203ENST00000476658 CAMTA1Q9Y6Y1 1673 aa20.82■□□□□ 0.92
DFFA-203ENST00000476658 NFAT5O94916 1531 aa20.82■□□□□ 0.92
DFFA-203ENST00000476658 OVOS2A0A0J9YW53 1432 aa20.81■□□□□ 0.92
DFFA-203ENST00000476658 OVOS2Q6IE36 1432 aa20.81■□□□□ 0.92
DFFA-203ENST00000476658 C11orf95C9JLR9 678 aaPredicted RBP20.81■□□□□ 0.92
DFFA-203ENST00000476658 EVA1CP58658 441 aa20.81■□□□□ 0.92
DFFA-203ENST00000476658 COG3Q96JB2 828 aa20.81■□□□□ 0.92
DFFA-203ENST00000476658 LTN1O94822 1766 aa20.81■□□□□ 0.92
DFFA-203ENST00000476658 RGPD5Q99666 1765 aa20.81■□□□□ 0.92
DFFA-203ENST00000476658 COL18A1P39060 1754 aa20.8■□□□□ 0.92
DFFA-203ENST00000476658 NSD3Q9BZ95 1437 aa20.79■□□□□ 0.92
DFFA-203ENST00000476658 ARHGEF25Q86VW2 580 aa20.79■□□□□ 0.92
DFFA-203ENST00000476658 AATKQ6ZMQ8 1374 aa20.79■□□□□ 0.92
DFFA-203ENST00000476658 CARD14Q9BXL6 1004 aa20.78■□□□□ 0.92
DFFA-203ENST00000476658 FYB1O15117 783 aa20.77■□□□□ 0.92
DFFA-203ENST00000476658 GGNBP2Q9H3C7 697 aa20.77■□□□□ 0.92
DFFA-203ENST00000476658 SPATA31A5Q5VU36 1347 aa20.77■□□□□ 0.91
DFFA-203ENST00000476658 SPATA31A7Q8IWB4 1347 aa20.77■□□□□ 0.91
DFFA-203ENST00000476658 COL5A2P05997 1499 aaPredicted RBP20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 6.5 ms