RNA–Protein interactions for RNA: ENST00000476581.6

XPC-205, Transcript of XPC complex subunit, DNA damage recognition and repair factor, humanhuman

TSL 1 (best)

Gene XPC, Length 2,944 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XPC-205ENST00000476581 XIRP1Q702N8 1843 aaKnown RBP16.09■□□□□ 0.17
XPC-205ENST00000476581 NLRP13Q86W25 1043 aa16.08■□□□□ 0.17
XPC-205ENST00000476581 HDGFL2Q7Z4V5 671 aaPredicted RBP16.08■□□□□ 0.16
XPC-205ENST00000476581 ADGRL3Q9HAR2 1447 aa16.08■□□□□ 0.16
XPC-205ENST00000476581 TMEM94Q12767 1356 aa16.07■□□□□ 0.16
XPC-205ENST00000476581 KIF20BQ96Q89 1820 aa16.07■□□□□ 0.16
XPC-205ENST00000476581 MORC1Q86VD1 984 aa16.07■□□□□ 0.16
XPC-205ENST00000476581 NOP58Q9Y2X3 529 aaKnown RBP16.07■□□□□ 0.16
XPC-205ENST00000476581 BRD4O60885 1362 aaPredicted RBP16.06■□□□□ 0.16
XPC-205ENST00000476581 ORAI2Q96SN7 254 aa16.05■□□□□ 0.16
XPC-205ENST00000476581 NRKQ7Z2Y5 1582 aa16.05■□□□□ 0.16
XPC-205ENST00000476581 PLEKHG3A1L390 1219 aa16.05■□□□□ 0.16
XPC-205ENST00000476581 HNRNPUQ00839 825 aaKnown RBP eCLIP16.03■□□□□ 0.16
XPC-205ENST00000476581 ANKRD26Q9UPS8 1709 aa16.03■□□□□ 0.16
XPC-205ENST00000476581 EDC4Q6P2E9 1401 aaKnown RBP16.03■□□□□ 0.16
XPC-205ENST00000476581 XPCQ01831 940 aaPredicted RBP16.02■□□□□ 0.16
XPC-205ENST00000476581 PPP4R2Q9NY27 417 aa16.02■□□□□ 0.16
XPC-205ENST00000476581 USP6P35125 1406 aa16.02■□□□□ 0.16
XPC-205ENST00000476581 ESCO1Q5FWF5 840 aa16.02■□□□□ 0.15
XPC-205ENST00000476581 UBE2Q2Q8WVN8 375 aa16.02■□□□□ 0.15
XPC-205ENST00000476581 DDX17Q92841 729 aaKnown RBP16.01■□□□□ 0.15
XPC-205ENST00000476581 NBR1Q14596 966 aa16.01■□□□□ 0.15
XPC-205ENST00000476581 NGDNQ8NEJ9 315 aaKnown RBP16.01■□□□□ 0.15
XPC-205ENST00000476581 MTHFSP49914 203 aa16.01■□□□□ 0.15
XPC-205ENST00000476581 NUTM2GQ5VZR2 741 aa16.01■□□□□ 0.15
XPC-205ENST00000476581 SSH2Q76I76 1423 aa16■□□□□ 0.15
XPC-205ENST00000476581 POLR3AO14802 1390 aaPredicted RBP16■□□□□ 0.15
XPC-205ENST00000476581 TTC21BQ7Z4L5 1316 aa16■□□□□ 0.15
XPC-205ENST00000476581 LRRC7Q96NW7 1537 aa16■□□□□ 0.15
XPC-205ENST00000476581 ANKARQ7Z5J8 1434 aa15.99■□□□□ 0.15
XPC-205ENST00000476581 ADAMTS8Q9UP79 889 aa15.99■□□□□ 0.15
XPC-205ENST00000476581 IRX6P78412 446 aaPredicted RBP15.98■□□□□ 0.15
XPC-205ENST00000476581 C19orf44Q9H6X5 657 aa15.98■□□□□ 0.15
XPC-205ENST00000476581 MAP2P11137 1827 aaKnown RBP15.98■□□□□ 0.15
XPC-205ENST00000476581 SOX12O15370 315 aa15.98■□□□□ 0.15
XPC-205ENST00000476581 PHF8Q9UPP1 1060 aa15.98■□□□□ 0.15
XPC-205ENST00000476581 PIK3C2AO00443 1686 aa15.98■□□□□ 0.15
XPC-205ENST00000476581 SHPRHQ149N8 1683 aa15.98■□□□□ 0.15
XPC-205ENST00000476581 FOXO3O43524 673 aa15.98■□□□□ 0.15
XPC-205ENST00000476581 NSD2O96028 1365 aa15.97■□□□□ 0.15
XPC-205ENST00000476581 PAK3O75914 559 aaPredicted RBP15.97■□□□□ 0.15
XPC-205ENST00000476581 RRS1Q15050 365 aaKnown RBP15.97■□□□□ 0.15
XPC-205ENST00000476581 ZNF692Q9BU19 519 aaPredicted RBP15.97■□□□□ 0.15
XPC-205ENST00000476581 PLEKHG5O94827 1062 aa15.96■□□□□ 0.15
XPC-205ENST00000476581 MARF1Q9Y4F3 1742 aaKnown RBP15.96■□□□□ 0.15
XPC-205ENST00000476581 C1orf167Q5SNV9 1468 aa15.96■□□□□ 0.15
XPC-205ENST00000476581 EMILIN1Q9Y6C2 1016 aa15.96■□□□□ 0.15
XPC-205ENST00000476581 MST1RQ04912 1400 aa15.96■□□□□ 0.14
XPC-205ENST00000476581 PPM1GO15355 546 aaPredicted RBP15.95■□□□□ 0.14
XPC-205ENST00000476581 CCDC146Q8IYE0 955 aa15.94■□□□□ 0.14
XPC-205ENST00000476581 POLKQ9UBT6 870 aa15.94■□□□□ 0.14
XPC-205ENST00000476581 CCDC136Q96JN2 1154 aa15.93■□□□□ 0.14
XPC-205ENST00000476581 OVOS2A0A0J9YW53 1432 aa15.93■□□□□ 0.14
XPC-205ENST00000476581 OVOS2Q6IE36 1432 aa15.93■□□□□ 0.14
XPC-205ENST00000476581 RTL5Q5HYW3 569 aaPredicted RBP15.93■□□□□ 0.14
XPC-205ENST00000476581 ATF3P18847 181 aa15.92■□□□□ 0.14
XPC-205ENST00000476581 IL27Q8NEV9 243 aa15.92■□□□□ 0.14
XPC-205ENST00000476581 COG3Q96JB2 828 aa15.92■□□□□ 0.14
XPC-205ENST00000476581 COL3A1P02461 1466 aaPredicted RBP15.91■□□□□ 0.14
XPC-205ENST00000476581 PSME1Q06323 249 aa15.9■□□□□ 0.14
XPC-205ENST00000476581 PEAK1Q9H792 1746 aa15.9■□□□□ 0.14
XPC-205ENST00000476581 MSH6P52701 1360 aa15.89■□□□□ 0.13
XPC-205ENST00000476581 ABTB2Q8N961 1025 aa15.89■□□□□ 0.13
XPC-205ENST00000476581 BLMP54132 1417 aaPredicted RBP15.89■□□□□ 0.13
XPC-205ENST00000476581 NLRP6P59044 892 aa15.88■□□□□ 0.13
XPC-205ENST00000476581 WDR43Q15061 677 aaKnown RBP eCLIP15.88■□□□□ 0.13
XPC-205ENST00000476581 TRPM3Q9HCF6 1732 aaPredicted RBP15.87■□□□□ 0.13
XPC-205ENST00000476581 CADPS2Q86UW7 1296 aa15.86■□□□□ 0.13
XPC-205ENST00000476581 IPO9Q96P70 1041 aaKnown RBP15.86■□□□□ 0.13
XPC-205ENST00000476581 DCCP43146 1447 aa15.86■□□□□ 0.13
XPC-205ENST00000476581 NCOA3Q9Y6Q9 1424 aa15.86■□□□□ 0.13
XPC-205ENST00000476581 TTC21AQ8NDW8 1320 aa15.86■□□□□ 0.13
XPC-205ENST00000476581 BRINP3Q76B58 766 aa15.86■□□□□ 0.13
XPC-205ENST00000476581 KRT28Q7Z3Y7 464 aa15.85■□□□□ 0.13
XPC-205ENST00000476581 PNPLA6Q8IY17 1366 aa15.85■□□□□ 0.13
XPC-205ENST00000476581 LMOD2Q6P5Q4 547 aa15.85■□□□□ 0.13
XPC-205ENST00000476581 DMRT2Q9Y5R5 561 aa15.85■□□□□ 0.13
XPC-205ENST00000476581 LTBP4Q8N2S1 1624 aa15.85■□□□□ 0.13
XPC-205ENST00000476581 USP31Q70CQ4 1352 aa15.85■□□□□ 0.13
XPC-205ENST00000476581 ZBED9Q6R2W3 1325 aa15.85■□□□□ 0.13
XPC-205ENST00000476581 B4GALNT3Q6L9W6 998 aa15.84■□□□□ 0.13
XPC-205ENST00000476581 U2SURPO15042 1029 aaKnown RBP15.84■□□□□ 0.13
XPC-205ENST00000476581 SLAIN2Q9P270 581 aa15.84■□□□□ 0.13
XPC-205ENST00000476581 MAP3K19Q56UN5 1328 aa15.84■□□□□ 0.13
XPC-205ENST00000476581 HSP90AB2PQ58FF8 381 aa15.84■□□□□ 0.13
XPC-205ENST00000476581 AATKQ6ZMQ8 1374 aa15.83■□□□□ 0.13
XPC-205ENST00000476581 U2AF1L5P0DN76 240 aaPredicted RBP15.83■□□□□ 0.12
XPC-205ENST00000476581 U2AF1Q01081 240 aaKnown RBP eCLIP15.83■□□□□ 0.12
XPC-205ENST00000476581 KIF1AQ12756 1690 aa15.83■□□□□ 0.12
XPC-205ENST00000476581 ANP32AP39687 249 aaKnown RBP15.82■□□□□ 0.12
XPC-205ENST00000476581 RRP7AQ9Y3A4 280 aaKnown RBP15.82■□□□□ 0.12
XPC-205ENST00000476581 SMG6Q86US8 1419 aaKnown RBP15.82■□□□□ 0.12
XPC-205ENST00000476581 APAF1O14727 1248 aa15.82■□□□□ 0.12
XPC-205ENST00000476581 CDCA7LQ96GN5 454 aa15.81■□□□□ 0.12
XPC-205ENST00000476581 RTN4Q9NQC3 1192 aaKnown RBP15.81■□□□□ 0.12
XPC-205ENST00000476581 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.81■□□□□ 0.12
XPC-205ENST00000476581 CFAP53Q96M91 514 aa15.81■□□□□ 0.12
XPC-205ENST00000476581 ZBTB47Q9UFB7 747 aaPredicted RBP15.81■□□□□ 0.12
XPC-205ENST00000476581 CABLES1Q8TDN4 633 aa15.81■□□□□ 0.12
XPC-205ENST00000476581 USP54Q70EL1 1684 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms