RNA–Protein interactions for RNA: ENST00000476559.2

RPGR-207, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

TSL 2

Gene RPGR, Length 1,047 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-207ENST00000476559 TTC24A2A3L6 582 aaPredicted RBP13.19□□□□□ -0.3
RPGR-207ENST00000476559 DGAT1O75907 488 aa13.19□□□□□ -0.3
RPGR-207ENST00000476559 FBXO31Q5XUX0 539 aaPredicted RBP13.19□□□□□ -0.3
RPGR-207ENST00000476559 BAP1Q92560 729 aa13.19□□□□□ -0.3
RPGR-207ENST00000476559 PRKCSHP14314 528 aaPredicted RBP13.18□□□□□ -0.3
RPGR-207ENST00000476559 HELBQ8NG08 1087 aaPredicted RBP13.18□□□□□ -0.3
RPGR-207ENST00000476559 SH3BP2P78314 561 aa13.17□□□□□ -0.3
RPGR-207ENST00000476559 F12P00748 615 aaPredicted RBP13.16□□□□□ -0.3
RPGR-207ENST00000476559 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.16□□□□□ -0.3
RPGR-207ENST00000476559 MYT1Q01538 1121 aa13.15□□□□□ -0.3
RPGR-207ENST00000476559 SNIP1Q8TAD8 396 aaKnown RBP13.15□□□□□ -0.3
RPGR-207ENST00000476559 CTDSPL2Q05D32 466 aa13.14□□□□□ -0.31
RPGR-207ENST00000476559 EHBP1Q8NDI1 1231 aa13.14□□□□□ -0.31
RPGR-207ENST00000476559 J3QL48 77 aa13.12□□□□□ -0.31
RPGR-207ENST00000476559 ZNF511Q8NB15 262 aa13.12□□□□□ -0.31
RPGR-207ENST00000476559 SMPD1P17405 629 aa13.1□□□□□ -0.31
RPGR-207ENST00000476559 ST8SIA5O15466 376 aa13.09□□□□□ -0.31
RPGR-207ENST00000476559 PPP2R2DQ66LE6 453 aa13.09□□□□□ -0.31
RPGR-207ENST00000476559 PCMTD1Q96MG8 357 aaPredicted RBP13.09□□□□□ -0.31
RPGR-207ENST00000476559 AP1G2O75843 785 aa13.08□□□□□ -0.32
RPGR-207ENST00000476559 ALDH1A1P00352 501 aa13.08□□□□□ -0.32
RPGR-207ENST00000476559 LRRN4Q8WUT4 740 aa13.08□□□□□ -0.32
RPGR-207ENST00000476559 SIAH2O43255 324 aa13.06□□□□□ -0.32
RPGR-207ENST00000476559 FOXJ1Q92949 421 aa13.06□□□□□ -0.32
RPGR-207ENST00000476559 GOPCQ9HD26 462 aa13.06□□□□□ -0.32
RPGR-207ENST00000476559 AAASQ9NRG9 546 aa13.04□□□□□ -0.32
RPGR-207ENST00000476559 AVPP01185 164 aa13.03□□□□□ -0.32
RPGR-207ENST00000476559 RFC5P40937 340 aa13.03□□□□□ -0.32
RPGR-207ENST00000476559 AGERQ15109 404 aa13.03□□□□□ -0.32
RPGR-207ENST00000476559 HPS1Q92902 700 aa13.03□□□□□ -0.32
RPGR-207ENST00000476559 TLL2Q9Y6L7 1015 aa13.03□□□□□ -0.32
RPGR-207ENST00000476559 VARSP26640 1264 aaKnown RBP13.02□□□□□ -0.33
RPGR-207ENST00000476559 ARMC2Q8NEN0 867 aa13.01□□□□□ -0.33
RPGR-207ENST00000476559 AXIN1O15169 862 aa13□□□□□ -0.33
RPGR-207ENST00000476559 NR6A1Q15406 480 aa13□□□□□ -0.33
RPGR-207ENST00000476559 C4orf48Q5BLP8 95 aa12.99□□□□□ -0.33
RPGR-207ENST00000476559 ZNF787Q6DD87 383 aa12.99□□□□□ -0.33
RPGR-207ENST00000476559 DACH1Q9UI36 760 aa12.99□□□□□ -0.33
RPGR-207ENST00000476559 WASF2Q9Y6W5 498 aa12.99□□□□□ -0.33
RPGR-207ENST00000476559 USP17L8P0C7I0 530 aa12.98□□□□□ -0.33
RPGR-207ENST00000476559 CTC1Q2NKJ3 1217 aa12.97□□□□□ -0.33
RPGR-207ENST00000476559 NBPF14Q5TI25 921 aa12.97□□□□□ -0.33
RPGR-207ENST00000476559 BPHLQ86WA6 291 aaPredicted RBP12.97□□□□□ -0.33
RPGR-207ENST00000476559 CRIPAKQ8N1N5 446 aa12.97□□□□□ -0.33
RPGR-207ENST00000476559 FAM174AQ8TBP5 190 aa12.97□□□□□ -0.33
RPGR-207ENST00000476559 POTECB2RU33 542 aa12.96□□□□□ -0.33
RPGR-207ENST00000476559 ARID5BQ14865 1188 aa12.96□□□□□ -0.33
RPGR-207ENST00000476559 HMX1Q9NP08 348 aaPredicted RBP12.96□□□□□ -0.33
RPGR-207ENST00000476559 EPS8L1Q8TE68 723 aa12.95□□□□□ -0.34
RPGR-207ENST00000476559 MAGEB6P1A0A0J9YX57 407 aa12.94□□□□□ -0.34
RPGR-207ENST00000476559 SMCPP49901 116 aaPredicted RBP12.94□□□□□ -0.34
RPGR-207ENST00000476559 CARD14Q9BXL6 1004 aa12.93□□□□□ -0.34
RPGR-207ENST00000476559 FKBPLQ9UIM3 349 aa12.93□□□□□ -0.34
RPGR-207ENST00000476559 SH3BP5LQ7L8J4 393 aa12.92□□□□□ -0.34
RPGR-207ENST00000476559 TMEM259Q4ZIN3 620 aa12.91□□□□□ -0.34
RPGR-207ENST00000476559 SH3RF1Q7Z6J0 888 aa12.91□□□□□ -0.34
RPGR-207ENST00000476559 MPNDQ8N594 471 aa12.9□□□□□ -0.34
RPGR-207ENST00000476559 GPKOWQ92917 476 aaPredicted RBP eCLIP12.9□□□□□ -0.34
RPGR-207ENST00000476559 NNTQ13423 1086 aa12.89□□□□□ -0.35
RPGR-207ENST00000476559 CDK15Q96Q40 435 aa12.88□□□□□ -0.35
RPGR-207ENST00000476559 ADH1CP00326 375 aa12.87□□□□□ -0.35
RPGR-207ENST00000476559 PDXDC2PQ6P474 469 aa12.87□□□□□ -0.35
RPGR-207ENST00000476559 ARHGAP9Q9BRR9 750 aa12.87□□□□□ -0.35
RPGR-207ENST00000476559 C1QTNF2Q9BXJ5 285 aa12.87□□□□□ -0.35
RPGR-207ENST00000476559 GMPR2Q9P2T1 348 aaKnown RBP12.87□□□□□ -0.35
RPGR-207ENST00000476559 ATP13A2Q9NQ11 1180 aa12.86□□□□□ -0.35
RPGR-207ENST00000476559 CAPN5O15484 640 aaPredicted RBP12.85□□□□□ -0.35
RPGR-207ENST00000476559 TRIM34Q9BYJ4 488 aa12.85□□□□□ -0.35
RPGR-207ENST00000476559 GRM5P41594 1212 aa12.84□□□□□ -0.35
RPGR-207ENST00000476559 ERFEQ4G0M1 354 aa12.84□□□□□ -0.35
RPGR-207ENST00000476559 VASH1Q7L8A9 365 aaPredicted RBP12.83□□□□□ -0.36
RPGR-207ENST00000476559 ZBTB33Q86T24 672 aa12.83□□□□□ -0.36
RPGR-207ENST00000476559 ZC3H4Q9UPT8 1303 aaKnown RBP12.83□□□□□ -0.36
RPGR-207ENST00000476559 NR3C2P08235 984 aa12.82□□□□□ -0.36
RPGR-207ENST00000476559 WDR4P57081 412 aaKnown RBP12.82□□□□□ -0.36
RPGR-207ENST00000476559 PNMA1Q8ND90 353 aa12.82□□□□□ -0.36
RPGR-207ENST00000476559 C11orf95C9JLR9 678 aaPredicted RBP12.81□□□□□ -0.36
RPGR-207ENST00000476559 BMP1P13497 986 aa12.81□□□□□ -0.36
RPGR-207ENST00000476559 PTK2Q05397 1052 aa12.81□□□□□ -0.36
RPGR-207ENST00000476559 TRMT44Q8IYL2 757 aaKnown RBP12.81□□□□□ -0.36
RPGR-207ENST00000476559 OCSTAMPQ9BR26 566 aa12.81□□□□□ -0.36
RPGR-207ENST00000476559 FSHRP23945 695 aa12.8□□□□□ -0.36
RPGR-207ENST00000476559 NR5A1Q13285 461 aa12.8□□□□□ -0.36
RPGR-207ENST00000476559 TIMP2P16035 220 aa12.79□□□□□ -0.36
RPGR-207ENST00000476559 GJD4Q96KN9 370 aaPredicted RBP12.79□□□□□ -0.36
RPGR-207ENST00000476559 ADAM32Q8TC27 787 aa12.78□□□□□ -0.36
RPGR-207ENST00000476559 SLC10A4Q96EP9 437 aa12.78□□□□□ -0.36
RPGR-207ENST00000476559 MAP4K5Q9Y4K4 846 aa12.78□□□□□ -0.36
RPGR-207ENST00000476559 BANK1Q8NDB2 785 aa12.77□□□□□ -0.37
RPGR-207ENST00000476559 KLF16Q9BXK1 252 aaPredicted RBP12.77□□□□□ -0.37
RPGR-207ENST00000476559 ZFAND3Q9H8U3 227 aa12.77□□□□□ -0.37
RPGR-207ENST00000476559 SNRKQ9NRH2 765 aa12.77□□□□□ -0.37
RPGR-207ENST00000476559 GPSM3Q9Y4H4 160 aa12.77□□□□□ -0.37
RPGR-207ENST00000476559 ZIC2O95409 532 aaPredicted RBP12.76□□□□□ -0.37
RPGR-207ENST00000476559 TRIM46Q7Z4K8 759 aa12.76□□□□□ -0.37
RPGR-207ENST00000476559 ZNF775Q96BV0 537 aaPredicted RBP12.76□□□□□ -0.37
RPGR-207ENST00000476559 ITPKCQ96DU7 683 aa12.76□□□□□ -0.37
RPGR-207ENST00000476559 SNRPBP14678 240 aaKnown RBP12.75□□□□□ -0.37
RPGR-207ENST00000476559 MTMR14Q8NCE2 650 aa12.74□□□□□ -0.37
RPGR-207ENST00000476559 SENP2Q9HC62 589 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms