RNA–Protein interactions for RNA: ENST00000476538.1

APH1A-206, Transcript of aph-1 homolog A, gamma-secretase subunit, humanhuman

TSL 2

Gene APH1A, Length 793 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APH1A-206ENST00000476538 PPIP5K1Q6PFW1 1433 aa21.64■■□□□ 1.06
APH1A-206ENST00000476538 PLEKHG3A1L390 1219 aa21.64■■□□□ 1.05
APH1A-206ENST00000476538 NBPF8Q3BBV2 869 aa21.64■■□□□ 1.05
APH1A-206ENST00000476538 UNC5CLQ8IV45 518 aa21.64■■□□□ 1.05
APH1A-206ENST00000476538 ACEP12821 1306 aa21.63■■□□□ 1.05
APH1A-206ENST00000476538 PAK3O75914 559 aaPredicted RBP21.63■■□□□ 1.05
APH1A-206ENST00000476538 CABP2Q9NPB3 220 aa21.62■■□□□ 1.05
APH1A-206ENST00000476538 RALGAPBQ86X10 1494 aa21.62■■□□□ 1.05
APH1A-206ENST00000476538 GLI3P10071 1580 aa21.61■■□□□ 1.05
APH1A-206ENST00000476538 UPF1Q92900 1129 aaKnown RBP eCLIP21.61■■□□□ 1.05
APH1A-206ENST00000476538 GJD4Q96KN9 370 aaPredicted RBP21.61■■□□□ 1.05
APH1A-206ENST00000476538 PHRF1Q9P1Y6 1649 aaKnown RBP21.6■■□□□ 1.05
APH1A-206ENST00000476538 COL14A1Q05707 1796 aaKnown RBP21.6■■□□□ 1.05
APH1A-206ENST00000476538 NRAPQ86VF7 1730 aa21.59■■□□□ 1.05
APH1A-206ENST00000476538 EVC2Q86UK5 1308 aa21.58■■□□□ 1.05
APH1A-206ENST00000476538 FAM83GA6ND36 823 aa21.56■■□□□ 1.04
APH1A-206ENST00000476538 ATAD2Q6PL18 1390 aa21.56■■□□□ 1.04
APH1A-206ENST00000476538 SBNO2Q9Y2G9 1366 aa21.56■■□□□ 1.04
APH1A-206ENST00000476538 VPS72Q15906 364 aa21.55■■□□□ 1.04
APH1A-206ENST00000476538 CARD11Q9BXL7 1154 aa21.55■■□□□ 1.04
APH1A-206ENST00000476538 NRKQ7Z2Y5 1582 aa21.54■■□□□ 1.04
APH1A-206ENST00000476538 BRD4O60885 1362 aaPredicted RBP21.54■■□□□ 1.04
APH1A-206ENST00000476538 CABP1Q9NZU7 370 aa21.53■■□□□ 1.04
APH1A-206ENST00000476538 USP6P35125 1406 aa21.53■■□□□ 1.04
APH1A-206ENST00000476538 BTG4Q9NY30 223 aa21.52■■□□□ 1.04
APH1A-206ENST00000476538 NUTM2GQ5VZR2 741 aa21.51■■□□□ 1.03
APH1A-206ENST00000476538 ABTB2Q8N961 1025 aa21.51■■□□□ 1.03
APH1A-206ENST00000476538 PRDM11Q9NQV5 511 aa21.51■■□□□ 1.03
APH1A-206ENST00000476538 KIAA0232Q92628 1395 aa21.5■■□□□ 1.03
APH1A-206ENST00000476538 USP19O94966 1318 aa21.5■■□□□ 1.03
APH1A-206ENST00000476538 CCDC9Q9Y3X0 531 aaKnown RBP21.49■■□□□ 1.03
APH1A-206ENST00000476538 AKAP12Q02952 1782 aa21.48■■□□□ 1.03
APH1A-206ENST00000476538 EP400Q96L91 3159 aa21.48■■□□□ 1.03
APH1A-206ENST00000476538 SSH2Q76I76 1423 aa21.47■■□□□ 1.03
APH1A-206ENST00000476538 PIK3C2AO00443 1686 aa21.46■■□□□ 1.03
APH1A-206ENST00000476538 BRWD3Q6RI45 1802 aa21.45■■□□□ 1.03
APH1A-206ENST00000476538 ZC3H6P61129 1189 aaKnown RBP21.45■■□□□ 1.02
APH1A-206ENST00000476538 NLRP13Q86W25 1043 aa21.45■■□□□ 1.02
APH1A-206ENST00000476538 CPDO75976 1380 aa21.45■■□□□ 1.02
APH1A-206ENST00000476538 SLIT3O75094 1523 aa21.45■■□□□ 1.02
APH1A-206ENST00000476538 ONECUT3O60422 494 aaPredicted RBP21.44■■□□□ 1.02
APH1A-206ENST00000476538 SEPT12Q8IYM1 358 aa21.44■■□□□ 1.02
APH1A-206ENST00000476538 LMO7Q8WWI1 1683 aa21.44■■□□□ 1.02
APH1A-206ENST00000476538 CHRNA2Q15822 529 aa21.43■■□□□ 1.02
APH1A-206ENST00000476538 CPSF1Q10570 1443 aaKnown RBP21.43■■□□□ 1.02
APH1A-206ENST00000476538 SPATA31A5Q5VU36 1347 aa21.42■■□□□ 1.02
APH1A-206ENST00000476538 MON2Q7Z3U7 1717 aa21.42■■□□□ 1.02
APH1A-206ENST00000476538 SPATA31A7Q8IWB4 1347 aa21.42■■□□□ 1.02
APH1A-206ENST00000476538 ZNF692Q9BU19 519 aaPredicted RBP21.42■■□□□ 1.02
APH1A-206ENST00000476538 CLSPNQ9HAW4 1339 aa21.4■■□□□ 1.02
APH1A-206ENST00000476538 GCP02774 474 aa21.4■■□□□ 1.02
APH1A-206ENST00000476538 NLRP6P59044 892 aa21.4■■□□□ 1.02
APH1A-206ENST00000476538 THSD7AQ9UPZ6 1657 aa21.4■■□□□ 1.02
APH1A-206ENST00000476538 FAM98CQ17RN3 349 aaKnown RBP21.39■■□□□ 1.01
APH1A-206ENST00000476538 CAMTA1Q9Y6Y1 1673 aa21.39■■□□□ 1.01
APH1A-206ENST00000476538 KTN1Q86UP2 1357 aaKnown RBP21.38■■□□□ 1.01
APH1A-206ENST00000476538 TTC21BQ7Z4L5 1316 aa21.38■■□□□ 1.01
APH1A-206ENST00000476538 TTC21AQ8NDW8 1320 aa21.38■■□□□ 1.01
APH1A-206ENST00000476538 A0A0G2JS52 829 aa21.38■■□□□ 1.01
APH1A-206ENST00000476538 MYT1Q01538 1121 aa21.38■■□□□ 1.01
APH1A-206ENST00000476538 CD163L1Q9NR16 1453 aa21.38■■□□□ 1.01
APH1A-206ENST00000476538 CCDC125Q86Z20 511 aa21.37■■□□□ 1.01
APH1A-206ENST00000476538 STRN4Q9NRL3 753 aa21.37■■□□□ 1.01
APH1A-206ENST00000476538 SPATA31A1Q5TZJ5 1347 aa21.36■■□□□ 1.01
APH1A-206ENST00000476538 KRT27Q7Z3Y8 459 aa21.36■■□□□ 1.01
APH1A-206ENST00000476538 PCGF6Q9BYE7 350 aa21.36■■□□□ 1.01
APH1A-206ENST00000476538 COL5A2P05997 1499 aaPredicted RBP21.35■■□□□ 1.01
APH1A-206ENST00000476538 ST20-MTHFSA0A0A6YYL1 179 aa21.35■■□□□ 1.01
APH1A-206ENST00000476538 TESK2Q96S53 571 aa21.35■■□□□ 1.01
APH1A-206ENST00000476538 BLMP54132 1417 aaPredicted RBP21.35■■□□□ 1.01
APH1A-206ENST00000476538 PUS7Q96PZ0 661 aaKnown RBP21.34■■□□□ 1.01
APH1A-206ENST00000476538 TIMELESSQ9UNS1 1208 aa21.34■■□□□ 1.01
APH1A-206ENST00000476538 TMC1Q8TDI8 760 aa21.33■■□□□ 1.01
APH1A-206ENST00000476538 USP54Q70EL1 1684 aa21.33■■□□□ 1
APH1A-206ENST00000476538 USP47Q96K76 1375 aa21.33■■□□□ 1
APH1A-206ENST00000476538 EVA1CP58658 441 aa21.32■■□□□ 1
APH1A-206ENST00000476538 AATKQ6ZMQ8 1374 aa21.32■■□□□ 1
APH1A-206ENST00000476538 SLC24A1O60721 1099 aa21.31■■□□□ 1
APH1A-206ENST00000476538 NINLQ9Y2I6 1382 aa21.31■■□□□ 1
APH1A-206ENST00000476538 NFAT5O94916 1531 aa21.3■■□□□ 1
APH1A-206ENST00000476538 LARP1Q6PKG0 1096 aaKnown RBP21.3■■□□□ 1
APH1A-206ENST00000476538 HDGFL2Q7Z4V5 671 aaPredicted RBP21.3■■□□□ 1
APH1A-206ENST00000476538 KCNH5Q8NCM2 988 aa21.3■■□□□ 1
APH1A-206ENST00000476538 A0A1W2PP64 1363 aa21.3■■□□□ 1
APH1A-206ENST00000476538 COL18A1P39060 1754 aa21.3■■□□□ 1
APH1A-206ENST00000476538 EDC4Q6P2E9 1401 aaKnown RBP21.29■■□□□ 1
APH1A-206ENST00000476538 ZBTB7CA1YPR0 619 aa21.29■■□□□ 1
APH1A-206ENST00000476538 SLC12A5Q9H2X9 1139 aa21.29■■□□□ 1
APH1A-206ENST00000476538 USP35Q9P2H5 1018 aa21.29■■□□□ 1
APH1A-206ENST00000476538 USP31Q70CQ4 1352 aa21.28■■□□□ 1
APH1A-206ENST00000476538 BARGINQ6ZT62 677 aa21.28■■□□□ 1
APH1A-206ENST00000476538 TERF2IPQ9NYB0 399 aa21.28■■□□□ 1
APH1A-206ENST00000476538 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.27■■□□□ 1
APH1A-206ENST00000476538 ABCC6O95255 1503 aa21.27■■□□□ 1
APH1A-206ENST00000476538 CRB1P82279 1406 aa21.27■■□□□ 1
APH1A-206ENST00000476538 ARHGEF25Q86VW2 580 aa21.26■□□□□ 0.99
APH1A-206ENST00000476538 SOX12O15370 315 aa21.25■□□□□ 0.99
APH1A-206ENST00000476538 SF3B2Q13435 895 aaKnown RBP21.25■□□□□ 0.99
APH1A-206ENST00000476538 TCP11L2Q8N4U5 519 aa21.25■□□□□ 0.99
APH1A-206ENST00000476538 RGPD1P0DJD0 1748 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms