RNA–Protein interactions for RNA: ENST00000476041.1

LSM10-202, Transcript of LSM10, U7 small nuclear RNA associated, humanhuman

TSL 3

Gene LSM10, Length 1,006 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM10-202ENST00000476041 CCDC61Q9Y6R9 512 aa20.33■□□□□ 0.85
LSM10-202ENST00000476041 LRP5O75197 1615 aa20.33■□□□□ 0.84
LSM10-202ENST00000476041 POLR3AO14802 1390 aaPredicted RBP20.33■□□□□ 0.84
LSM10-202ENST00000476041 NRAPQ86VF7 1730 aa20.32■□□□□ 0.84
LSM10-202ENST00000476041 COL14A1Q05707 1796 aaKnown RBP20.31■□□□□ 0.84
LSM10-202ENST00000476041 CENPJQ9HC77 1338 aaPredicted RBP20.31■□□□□ 0.84
LSM10-202ENST00000476041 PAK3O75914 559 aaPredicted RBP20.31■□□□□ 0.84
LSM10-202ENST00000476041 SIN3AQ96ST3 1273 aa20.31■□□□□ 0.84
LSM10-202ENST00000476041 PLEKHG3A1L390 1219 aa20.3■□□□□ 0.84
LSM10-202ENST00000476041 ACEP12821 1306 aa20.29■□□□□ 0.84
LSM10-202ENST00000476041 TRPM1Q7Z4N2 1603 aa20.29■□□□□ 0.84
LSM10-202ENST00000476041 ONECUT3O60422 494 aaPredicted RBP20.29■□□□□ 0.84
LSM10-202ENST00000476041 BRWD3Q6RI45 1802 aa20.29■□□□□ 0.84
LSM10-202ENST00000476041 QRICH2Q9H0J4 1663 aa20.29■□□□□ 0.84
LSM10-202ENST00000476041 NBPF8Q3BBV2 869 aa20.28■□□□□ 0.84
LSM10-202ENST00000476041 CCDC125Q86Z20 511 aa20.28■□□□□ 0.84
LSM10-202ENST00000476041 SEPT12Q8IYM1 358 aa20.27■□□□□ 0.84
LSM10-202ENST00000476041 BTG4Q9NY30 223 aa20.27■□□□□ 0.84
LSM10-202ENST00000476041 CCDC9Q9Y3X0 531 aaKnown RBP20.27■□□□□ 0.84
LSM10-202ENST00000476041 PHRF1Q9P1Y6 1649 aaKnown RBP20.27■□□□□ 0.83
LSM10-202ENST00000476041 SRPK2P78362 688 aaKnown RBP20.25■□□□□ 0.83
LSM10-202ENST00000476041 NEUROD1Q13562 356 aa20.25■□□□□ 0.83
LSM10-202ENST00000476041 PPIP5K1Q6PFW1 1433 aa20.24■□□□□ 0.83
LSM10-202ENST00000476041 CABP2Q9NPB3 220 aa20.23■□□□□ 0.83
LSM10-202ENST00000476041 PRDM11Q9NQV5 511 aa20.23■□□□□ 0.83
LSM10-202ENST00000476041 KIAA0232Q92628 1395 aa20.21■□□□□ 0.83
LSM10-202ENST00000476041 BLMP54132 1417 aaPredicted RBP20.21■□□□□ 0.83
LSM10-202ENST00000476041 ROCK2O75116 1388 aaKnown RBP20.21■□□□□ 0.83
LSM10-202ENST00000476041 NUTM2GQ5VZR2 741 aa20.2■□□□□ 0.82
LSM10-202ENST00000476041 SPATA31A5Q5VU36 1347 aa20.2■□□□□ 0.82
LSM10-202ENST00000476041 SPATA31A7Q8IWB4 1347 aa20.2■□□□□ 0.82
LSM10-202ENST00000476041 NRKQ7Z2Y5 1582 aa20.2■□□□□ 0.82
LSM10-202ENST00000476041 BRD4O60885 1362 aaPredicted RBP20.2■□□□□ 0.82
LSM10-202ENST00000476041 FAM98CQ17RN3 349 aaKnown RBP20.19■□□□□ 0.82
LSM10-202ENST00000476041 KRT27Q7Z3Y8 459 aa20.19■□□□□ 0.82
LSM10-202ENST00000476041 ABTB2Q8N961 1025 aa20.19■□□□□ 0.82
LSM10-202ENST00000476041 USP19O94966 1318 aa20.18■□□□□ 0.82
LSM10-202ENST00000476041 EVC2Q86UK5 1308 aa20.18■□□□□ 0.82
LSM10-202ENST00000476041 ZC3H6P61129 1189 aaKnown RBP20.17■□□□□ 0.82
LSM10-202ENST00000476041 THSD7AQ9UPZ6 1657 aa20.16■□□□□ 0.82
LSM10-202ENST00000476041 CHRNA2Q15822 529 aa20.16■□□□□ 0.82
LSM10-202ENST00000476041 CABP1Q9NZU7 370 aa20.16■□□□□ 0.82
LSM10-202ENST00000476041 CPDO75976 1380 aa20.16■□□□□ 0.82
LSM10-202ENST00000476041 USP6P35125 1406 aa20.16■□□□□ 0.82
LSM10-202ENST00000476041 A0A0G2JS52 829 aa20.15■□□□□ 0.82
LSM10-202ENST00000476041 MYT1Q01538 1121 aa20.15■□□□□ 0.82
LSM10-202ENST00000476041 NLRP13Q86W25 1043 aa20.15■□□□□ 0.82
LSM10-202ENST00000476041 SPATA31A1Q5TZJ5 1347 aa20.14■□□□□ 0.81
LSM10-202ENST00000476041 LMO7Q8WWI1 1683 aa20.13■□□□□ 0.81
LSM10-202ENST00000476041 SSH2Q76I76 1423 aa20.13■□□□□ 0.81
LSM10-202ENST00000476041 CAMTA1Q9Y6Y1 1673 aa20.12■□□□□ 0.81
LSM10-202ENST00000476041 GCP02774 474 aa20.11■□□□□ 0.81
LSM10-202ENST00000476041 SF3B2Q13435 895 aaKnown RBP20.11■□□□□ 0.81
LSM10-202ENST00000476041 STRN4Q9NRL3 753 aa20.11■□□□□ 0.81
LSM10-202ENST00000476041 SBNO2Q9Y2G9 1366 aa20.1■□□□□ 0.81
LSM10-202ENST00000476041 DEFB132Q7Z7B7 95 aa20.1■□□□□ 0.81
LSM10-202ENST00000476041 AKAP12Q02952 1782 aa20.09■□□□□ 0.81
LSM10-202ENST00000476041 SLIT3O75094 1523 aa20.09■□□□□ 0.81
LSM10-202ENST00000476041 PIK3C2AO00443 1686 aa20.09■□□□□ 0.81
LSM10-202ENST00000476041 TONSLQ96HA7 1378 aa20.08■□□□□ 0.81
LSM10-202ENST00000476041 EVA1CP58658 441 aa20.07■□□□□ 0.8
LSM10-202ENST00000476041 NLRP6P59044 892 aa20.07■□□□□ 0.8
LSM10-202ENST00000476041 ZNF692Q9BU19 519 aaPredicted RBP20.07■□□□□ 0.8
LSM10-202ENST00000476041 CARD11Q9BXL7 1154 aa20.07■□□□□ 0.8
LSM10-202ENST00000476041 CPSF1Q10570 1443 aaKnown RBP20.06■□□□□ 0.8
LSM10-202ENST00000476041 BARGINQ6ZT62 677 aa20.06■□□□□ 0.8
LSM10-202ENST00000476041 RGPD1P0DJD0 1748 aa20.05■□□□□ 0.8
LSM10-202ENST00000476041 TRIM26Q12899 539 aaPredicted RBP20.05■□□□□ 0.8
LSM10-202ENST00000476041 LARP1Q6PKG0 1096 aaKnown RBP20.05■□□□□ 0.8
LSM10-202ENST00000476041 COL5A2P05997 1499 aaPredicted RBP20.05■□□□□ 0.8
LSM10-202ENST00000476041 AATKQ6ZMQ8 1374 aa20.04■□□□□ 0.8
LSM10-202ENST00000476041 TTC21BQ7Z4L5 1316 aa20.03■□□□□ 0.8
LSM10-202ENST00000476041 BAG6P46379 1132 aa20.03■□□□□ 0.8
LSM10-202ENST00000476041 FAM182BQ5T319 152 aa20.03■□□□□ 0.8
LSM10-202ENST00000476041 USP35Q9P2H5 1018 aa20.03■□□□□ 0.8
LSM10-202ENST00000476041 TTC21AQ8NDW8 1320 aa20.02■□□□□ 0.8
LSM10-202ENST00000476041 PSDA5PKW4 1024 aaPredicted RBP20.02■□□□□ 0.8
LSM10-202ENST00000476041 TCP11L2Q8N4U5 519 aa20.02■□□□□ 0.8
LSM10-202ENST00000476041 THRAP3Q9Y2W1 955 aaKnown RBP20.02■□□□□ 0.8
LSM10-202ENST00000476041 MON2Q7Z3U7 1717 aa20.02■□□□□ 0.79
LSM10-202ENST00000476041 COL18A1P39060 1754 aa20.01■□□□□ 0.79
LSM10-202ENST00000476041 TNS1Q9HBL0 1735 aaKnown RBP20.01■□□□□ 0.79
LSM10-202ENST00000476041 KTN1Q86UP2 1357 aaKnown RBP20■□□□□ 0.79
LSM10-202ENST00000476041 DISP2A7MBM2 1401 aa20■□□□□ 0.79
LSM10-202ENST00000476041 CRB1P82279 1406 aa20■□□□□ 0.79
LSM10-202ENST00000476041 FAM196AQ6ZSG2 479 aa19.99■□□□□ 0.79
LSM10-202ENST00000476041 YY1P25490 414 aa19.98■□□□□ 0.79
LSM10-202ENST00000476041 KCNH5Q8NCM2 988 aa19.98■□□□□ 0.79
LSM10-202ENST00000476041 PARP4Q9UKK3 1724 aaKnown RBP19.98■□□□□ 0.79
LSM10-202ENST00000476041 CD163L1Q9NR16 1453 aa19.98■□□□□ 0.79
LSM10-202ENST00000476041 ZBTB7CA1YPR0 619 aa19.97■□□□□ 0.79
LSM10-202ENST00000476041 EN1Q05925 392 aaPredicted RBP19.96■□□□□ 0.79
LSM10-202ENST00000476041 PDE3BQ13370 1112 aa19.96■□□□□ 0.79
LSM10-202ENST00000476041 ARHGEF25Q86VW2 580 aa19.96■□□□□ 0.79
LSM10-202ENST00000476041 NFAT5O94916 1531 aa19.96■□□□□ 0.79
LSM10-202ENST00000476041 USP54Q70EL1 1684 aa19.95■□□□□ 0.78
LSM10-202ENST00000476041 PUS7Q96PZ0 661 aaKnown RBP19.95■□□□□ 0.78
LSM10-202ENST00000476041 TRIM37O94972 964 aa19.94■□□□□ 0.78
LSM10-202ENST00000476041 AXIN2Q9Y2T1 843 aa19.94■□□□□ 0.78
LSM10-202ENST00000476041 USP31Q70CQ4 1352 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms