RNA–Protein interactions for RNA: ENST00000476016.1

GABRE-207, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, humanhuman

TSL 4

Gene GABRE, Length 813 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRE-207ENST00000476016 MRS2Q9HD23 443 aa11.04□□□□□ -0.64
GABRE-207ENST00000476016 MARF1Q9Y4F3 1742 aaKnown RBP11.04□□□□□ -0.64
GABRE-207ENST00000476016 TMEM94Q12767 1356 aa11.03□□□□□ -0.64
GABRE-207ENST00000476016 USP31Q70CQ4 1352 aa11.03□□□□□ -0.64
GABRE-207ENST00000476016 PNPLA6Q8IY17 1366 aa11.03□□□□□ -0.64
GABRE-207ENST00000476016 AATKQ6ZMQ8 1374 aa11.03□□□□□ -0.64
GABRE-207ENST00000476016 TTC21BQ7Z4L5 1316 aa11.02□□□□□ -0.65
GABRE-207ENST00000476016 TTC21AQ8NDW8 1320 aa11.02□□□□□ -0.65
GABRE-207ENST00000476016 C1orf167Q5SNV9 1468 aa11.01□□□□□ -0.65
GABRE-207ENST00000476016 MORC1Q86VD1 984 aa11.01□□□□□ -0.65
GABRE-207ENST00000476016 KIF1AQ12756 1690 aa11.01□□□□□ -0.65
GABRE-207ENST00000476016 OVOS2A0A0J9YW53 1432 aa11.01□□□□□ -0.65
GABRE-207ENST00000476016 OVOS2Q6IE36 1432 aa11.01□□□□□ -0.65
GABRE-207ENST00000476016 SMG6Q86US8 1419 aaKnown RBP11.01□□□□□ -0.65
GABRE-207ENST00000476016 LTBP4Q8N2S1 1624 aa11□□□□□ -0.65
GABRE-207ENST00000476016 PHF8Q9UPP1 1060 aa11□□□□□ -0.65
GABRE-207ENST00000476016 SHPRHQ149N8 1683 aa11□□□□□ -0.65
GABRE-207ENST00000476016 TRPM3Q9HCF6 1732 aaPredicted RBP11□□□□□ -0.65
GABRE-207ENST00000476016 PIK3C2AO00443 1686 aa10.99□□□□□ -0.65
GABRE-207ENST00000476016 CADPS2Q86UW7 1296 aa10.99□□□□□ -0.65
GABRE-207ENST00000476016 RBM33Q96EV2 1170 aaKnown RBP10.99□□□□□ -0.65
GABRE-207ENST00000476016 ZNF335Q9H4Z2 1342 aaPredicted RBP10.99□□□□□ -0.65
GABRE-207ENST00000476016 COL3A1P02461 1466 aaPredicted RBP10.99□□□□□ -0.65
GABRE-207ENST00000476016 HOXD11P31277 338 aaPredicted RBP10.98□□□□□ -0.65
GABRE-207ENST00000476016 GGNBP2Q9H3C7 697 aa10.98□□□□□ -0.65
GABRE-207ENST00000476016 NUTM2FA1L443 756 aa10.97□□□□□ -0.65
GABRE-207ENST00000476016 MTHFSP49914 203 aa10.97□□□□□ -0.65
GABRE-207ENST00000476016 NME9Q86XW9 330 aa10.97□□□□□ -0.65
GABRE-207ENST00000476016 RNF216Q9NWF9 866 aaPredicted RBP10.97□□□□□ -0.65
GABRE-207ENST00000476016 BLMP54132 1417 aaPredicted RBP10.97□□□□□ -0.65
GABRE-207ENST00000476016 MSH6P52701 1360 aa10.96□□□□□ -0.65
GABRE-207ENST00000476016 PMFBP1Q8TBY8 1022 aa10.96□□□□□ -0.65
GABRE-207ENST00000476016 ORAI2Q96SN7 254 aa10.96□□□□□ -0.65
GABRE-207ENST00000476016 POLKQ9UBT6 870 aa10.96□□□□□ -0.65
GABRE-207ENST00000476016 ALS2Q96Q42 1657 aa10.95□□□□□ -0.66
GABRE-207ENST00000476016 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.95□□□□□ -0.66
GABRE-207ENST00000476016 NGDNQ8NEJ9 315 aaKnown RBP10.95□□□□□ -0.66
GABRE-207ENST00000476016 ZRANB1Q9UGI0 708 aa10.95□□□□□ -0.66
GABRE-207ENST00000476016 PHRF1Q9P1Y6 1649 aaKnown RBP10.95□□□□□ -0.66
GABRE-207ENST00000476016 KIF24Q5T7B8 1368 aa10.94□□□□□ -0.66
GABRE-207ENST00000476016 ATF3P18847 181 aa10.94□□□□□ -0.66
GABRE-207ENST00000476016 ESCO1Q5FWF5 840 aa10.94□□□□□ -0.66
GABRE-207ENST00000476016 ADAMTS8Q9UP79 889 aa10.94□□□□□ -0.66
GABRE-207ENST00000476016 CDK12Q9NYV4 1490 aaPredicted RBP10.93□□□□□ -0.66
GABRE-207ENST00000476016 ZBED9Q6R2W3 1325 aa10.93□□□□□ -0.66
GABRE-207ENST00000476016 FAM9BQ8IZU0 186 aa10.93□□□□□ -0.66
GABRE-207ENST00000476016 COG3Q96JB2 828 aa10.93□□□□□ -0.66
GABRE-207ENST00000476016 SBNO1A3KN83 1393 aa10.92□□□□□ -0.66
GABRE-207ENST00000476016 CNGB1Q14028 1251 aaPredicted RBP10.92□□□□□ -0.66
GABRE-207ENST00000476016 C14orf37Q86TY3 774 aa10.92□□□□□ -0.66
GABRE-207ENST00000476016 SLAIN2Q9P270 581 aa10.92□□□□□ -0.66
GABRE-207ENST00000476016 PXDNQ92626 1479 aa10.92□□□□□ -0.66
GABRE-207ENST00000476016 PEAK1Q9H792 1746 aa10.92□□□□□ -0.66
GABRE-207ENST00000476016 SLIT3O75094 1523 aa10.91□□□□□ -0.66
GABRE-207ENST00000476016 FOXO3O43524 673 aa10.91□□□□□ -0.66
GABRE-207ENST00000476016 NGEFQ8N5V2 710 aa10.91□□□□□ -0.66
GABRE-207ENST00000476016 RGPD1P0DJD0 1748 aa10.91□□□□□ -0.66
GABRE-207ENST00000476016 CRYBG1Q9Y4K1 1723 aa10.91□□□□□ -0.66
GABRE-207ENST00000476016 USP19O94966 1318 aa10.9□□□□□ -0.66
GABRE-207ENST00000476016 SOS2Q07890 1332 aaPredicted RBP10.9□□□□□ -0.66
GABRE-207ENST00000476016 NFAT5O94916 1531 aa10.9□□□□□ -0.66
GABRE-207ENST00000476016 PSME1Q06323 249 aa10.9□□□□□ -0.66
GABRE-207ENST00000476016 BRINP3Q76B58 766 aa10.9□□□□□ -0.66
GABRE-207ENST00000476016 NHSL1Q5SYE7 1610 aa10.9□□□□□ -0.66
GABRE-207ENST00000476016 CENPBP07199 599 aaPredicted RBP10.89□□□□□ -0.67
GABRE-207ENST00000476016 FBLN1P23142 703 aa10.89□□□□□ -0.67
GABRE-207ENST00000476016 IL13P35225 146 aa10.89□□□□□ -0.67
GABRE-207ENST00000476016 KRT28Q7Z3Y7 464 aa10.89□□□□□ -0.67
GABRE-207ENST00000476016 CFAP53Q96M91 514 aa10.89□□□□□ -0.67
GABRE-207ENST00000476016 YTHDC1Q96MU7 727 aaKnown RBP10.89□□□□□ -0.67
GABRE-207ENST00000476016 NPHP3Q7Z494 1330 aa10.88□□□□□ -0.67
GABRE-207ENST00000476016 ZNF521Q96K83 1311 aa10.88□□□□□ -0.67
GABRE-207ENST00000476016 LTN1O94822 1766 aa10.88□□□□□ -0.67
GABRE-207ENST00000476016 TNNT2P45379 298 aaPredicted RBP10.88□□□□□ -0.67
GABRE-207ENST00000476016 NLRP6P59044 892 aa10.88□□□□□ -0.67
GABRE-207ENST00000476016 HNRNPUQ00839 825 aaKnown RBP eCLIP10.88□□□□□ -0.67
GABRE-207ENST00000476016 ABTB2Q8N961 1025 aa10.88□□□□□ -0.67
GABRE-207ENST00000476016 PLEKHF1Q96S99 279 aa10.88□□□□□ -0.67
GABRE-207ENST00000476016 MED1Q15648 1581 aaPredicted RBP10.87□□□□□ -0.67
GABRE-207ENST00000476016 DCAF8L1A6NGE4 600 aa10.87□□□□□ -0.67
GABRE-207ENST00000476016 EMILIN1Q9Y6C2 1016 aa10.87□□□□□ -0.67
GABRE-207ENST00000476016 IQSEC2Q5JU85 1478 aa10.87□□□□□ -0.67
GABRE-207ENST00000476016 MAP3K19Q56UN5 1328 aa10.86□□□□□ -0.67
GABRE-207ENST00000476016 SPATA31A3Q5VYP0 1347 aa10.86□□□□□ -0.67
GABRE-207ENST00000476016 COL18A1P39060 1754 aa10.86□□□□□ -0.67
GABRE-207ENST00000476016 DIAPH1O60610 1272 aaKnown RBP10.86□□□□□ -0.67
GABRE-207ENST00000476016 FCHSD2O94868 740 aa10.86□□□□□ -0.67
GABRE-207ENST00000476016 WDR43Q15061 677 aaKnown RBP eCLIP10.86□□□□□ -0.67
GABRE-207ENST00000476016 KCNH5Q8NCM2 988 aa10.86□□□□□ -0.67
GABRE-207ENST00000476016 ARHGEF25Q86VW2 580 aa10.85□□□□□ -0.67
GABRE-207ENST00000476016 NUDCQ9Y266 331 aa10.85□□□□□ -0.67
GABRE-207ENST00000476016 RTL1A6NKG5 1358 aa10.85□□□□□ -0.67
GABRE-207ENST00000476016 PDE3BQ13370 1112 aa10.84□□□□□ -0.67
GABRE-207ENST00000476016 RRS1Q15050 365 aaKnown RBP10.84□□□□□ -0.67
GABRE-207ENST00000476016 CCDC27Q2M243 656 aa10.84□□□□□ -0.67
GABRE-207ENST00000476016 TRMT2AQ8IZ69 625 aaKnown RBP10.84□□□□□ -0.67
GABRE-207ENST00000476016 RUNDC1Q96C34 613 aa10.84□□□□□ -0.67
GABRE-207ENST00000476016 FLT4P35916 1363 aa10.84□□□□□ -0.67
GABRE-207ENST00000476016 AHDC1Q5TGY3 1603 aaPredicted RBP10.84□□□□□ -0.67
GABRE-207ENST00000476016 ABCC6O95255 1503 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms