RNA–Protein interactions for RNA: ENST00000475772.5

CALD1-217, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 753 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-217ENST00000475772 NUTM2FA1L443 756 aa15.64■□□□□ 0.09
CALD1-217ENST00000475772 ATRNO75882 1429 aa15.64■□□□□ 0.09
CALD1-217ENST00000475772 NPHP3Q7Z494 1330 aa15.64■□□□□ 0.09
CALD1-217ENST00000475772 LRPPRCP42704 1394 aaKnown RBP15.63■□□□□ 0.09
CALD1-217ENST00000475772 MARF1Q9Y4F3 1742 aaKnown RBP15.63■□□□□ 0.09
CALD1-217ENST00000475772 SRCAPQ6ZRS2 3230 aa15.63■□□□□ 0.09
CALD1-217ENST00000475772 SP7Q8TDD2 431 aaPredicted RBP15.63■□□□□ 0.09
CALD1-217ENST00000475772 BCL9LQ86UU0 1499 aa15.63■□□□□ 0.09
CALD1-217ENST00000475772 CCDC144AA2RUR9 1427 aa15.62■□□□□ 0.09
CALD1-217ENST00000475772 EP400Q96L91 3159 aa15.62■□□□□ 0.09
CALD1-217ENST00000475772 KNDC1Q76NI1 1749 aa15.61■□□□□ 0.09
CALD1-217ENST00000475772 PYGBP11216 843 aa15.61■□□□□ 0.09
CALD1-217ENST00000475772 KIF12Q96FN5 646 aa15.61■□□□□ 0.09
CALD1-217ENST00000475772 RGPD8O14715 1765 aaPredicted RBP15.61■□□□□ 0.09
CALD1-217ENST00000475772 ANKRD30BQ9BXX2 1392 aa15.61■□□□□ 0.09
CALD1-217ENST00000475772 PIK3C2GO75747 1445 aa15.6■□□□□ 0.09
CALD1-217ENST00000475772 CHRM1P11229 460 aaPredicted RBP15.59■□□□□ 0.09
CALD1-217ENST00000475772 SIRT1Q96EB6 747 aa15.59■□□□□ 0.09
CALD1-217ENST00000475772 FMN2Q9NZ56 1722 aa15.59■□□□□ 0.09
CALD1-217ENST00000475772 C14orf93Q9H972 538 aaKnown RBP15.58■□□□□ 0.08
CALD1-217ENST00000475772 SPATA31A3Q5VYP0 1347 aa15.58■□□□□ 0.08
CALD1-217ENST00000475772 YTHDC2Q9H6S0 1430 aaKnown RBP15.58■□□□□ 0.08
CALD1-217ENST00000475772 CLCN6P51797 869 aa15.57■□□□□ 0.08
CALD1-217ENST00000475772 GJD4Q96KN9 370 aaPredicted RBP15.57■□□□□ 0.08
CALD1-217ENST00000475772 ATAD2Q6PL18 1390 aa15.57■□□□□ 0.08
CALD1-217ENST00000475772 CFAP70Q5T0N1 1121 aa15.56■□□□□ 0.08
CALD1-217ENST00000475772 KRT28Q7Z3Y7 464 aa15.56■□□□□ 0.08
CALD1-217ENST00000475772 MAP3K13O43283 966 aa15.55■□□□□ 0.08
CALD1-217ENST00000475772 SLIT2O94813 1529 aa15.54■□□□□ 0.08
CALD1-217ENST00000475772 NRXN1Q9ULB1 1477 aa15.54■□□□□ 0.08
CALD1-217ENST00000475772 GABBR2O75899 941 aa15.54■□□□□ 0.08
CALD1-217ENST00000475772 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.54■□□□□ 0.08
CALD1-217ENST00000475772 GLI3P10071 1580 aa15.53■□□□□ 0.08
CALD1-217ENST00000475772 AMER1Q5JTC6 1135 aaPredicted RBP15.53■□□□□ 0.08
CALD1-217ENST00000475772 UNC5CLQ8IV45 518 aa15.53■□□□□ 0.08
CALD1-217ENST00000475772 CABLES1Q8TDN4 633 aa15.52■□□□□ 0.08
CALD1-217ENST00000475772 SGIP1Q9BQI5 828 aa15.52■□□□□ 0.08
CALD1-217ENST00000475772 PHF8Q9UPP1 1060 aa15.52■□□□□ 0.08
CALD1-217ENST00000475772 BRWD3Q6RI45 1802 aa15.52■□□□□ 0.07
CALD1-217ENST00000475772 KIF1AQ12756 1690 aa15.51■□□□□ 0.07
CALD1-217ENST00000475772 PRAM1Q96QH2 718 aa15.5■□□□□ 0.07
CALD1-217ENST00000475772 RTN4Q9NQC3 1192 aaKnown RBP15.5■□□□□ 0.07
CALD1-217ENST00000475772 RALGAPBQ86X10 1494 aa15.5■□□□□ 0.07
CALD1-217ENST00000475772 DHX57Q6P158 1386 aaKnown RBP15.49■□□□□ 0.07
CALD1-217ENST00000475772 ECM2O94769 699 aaPredicted RBP15.49■□□□□ 0.07
CALD1-217ENST00000475772 SAFB2Q14151 953 aaKnown RBP eCLIP15.49■□□□□ 0.07
CALD1-217ENST00000475772 CCDC125Q86Z20 511 aa15.49■□□□□ 0.07
CALD1-217ENST00000475772 MS4A3Q96HJ5 214 aa15.49■□□□□ 0.07
CALD1-217ENST00000475772 USP32Q8NFA0 1604 aa15.49■□□□□ 0.07
CALD1-217ENST00000475772 GALR2O43603 387 aaPredicted RBP15.48■□□□□ 0.07
CALD1-217ENST00000475772 PCDHB13Q9Y5F0 798 aa15.48■□□□□ 0.07
CALD1-217ENST00000475772 ONECUT3O60422 494 aaPredicted RBP15.47■□□□□ 0.07
CALD1-217ENST00000475772 PSME1Q06323 249 aa15.47■□□□□ 0.07
CALD1-217ENST00000475772 TNS3Q68CZ2 1445 aa15.47■□□□□ 0.07
CALD1-217ENST00000475772 PMFBP1Q8TBY8 1022 aa15.47■□□□□ 0.07
CALD1-217ENST00000475772 SBNO1A3KN83 1393 aa15.47■□□□□ 0.07
CALD1-217ENST00000475772 FAM83GA6ND36 823 aa15.46■□□□□ 0.07
CALD1-217ENST00000475772 DLC1Q96QB1 1528 aa15.45■□□□□ 0.06
CALD1-217ENST00000475772 VPS72Q15906 364 aa15.45■□□□□ 0.06
CALD1-217ENST00000475772 SEPT12Q8IYM1 358 aa15.45■□□□□ 0.06
CALD1-217ENST00000475772 ABCA3Q99758 1704 aa15.45■□□□□ 0.06
CALD1-217ENST00000475772 ADGRB1O14514 1584 aa15.45■□□□□ 0.06
CALD1-217ENST00000475772 DEFB132Q7Z7B7 95 aa15.44■□□□□ 0.06
CALD1-217ENST00000475772 IFNL1Q8IU54 200 aa15.44■□□□□ 0.06
CALD1-217ENST00000475772 PLCH1Q4KWH8 1693 aa15.44■□□□□ 0.06
CALD1-217ENST00000475772 PRR36Q9H6K5 1346 aa15.43■□□□□ 0.06
CALD1-217ENST00000475772 NWD2Q9ULI1 1742 aa15.43■□□□□ 0.06
CALD1-217ENST00000475772 TRAK1Q9UPV9 953 aa15.43■□□□□ 0.06
CALD1-217ENST00000475772 RAB3GAP2Q9H2M9 1393 aa15.43■□□□□ 0.06
CALD1-217ENST00000475772 TRPM3Q9HCF6 1732 aaPredicted RBP15.43■□□□□ 0.06
CALD1-217ENST00000475772 ACIN1Q9UKV3 1341 aaKnown RBP15.43■□□□□ 0.06
CALD1-217ENST00000475772 LMOD2Q6P5Q4 547 aa15.42■□□□□ 0.06
CALD1-217ENST00000475772 RNF25Q96BH1 459 aaPredicted RBP15.42■□□□□ 0.06
CALD1-217ENST00000475772 HIRIP3Q9BW71 556 aaPredicted RBP15.42■□□□□ 0.06
CALD1-217ENST00000475772 POGKQ9P215 609 aa15.42■□□□□ 0.06
CALD1-217ENST00000475772 BLMP54132 1417 aaPredicted RBP15.42■□□□□ 0.06
CALD1-217ENST00000475772 ANKARQ7Z5J8 1434 aa15.41■□□□□ 0.06
CALD1-217ENST00000475772 ADGRB2O60241 1585 aa15.41■□□□□ 0.06
CALD1-217ENST00000475772 HAP1P54257 671 aaPredicted RBP15.4■□□□□ 0.06
CALD1-217ENST00000475772 PCDHB8Q9UN66 801 aa15.4■□□□□ 0.06
CALD1-217ENST00000475772 KDM2AQ9Y2K7 1162 aa15.4■□□□□ 0.06
CALD1-217ENST00000475772 ALS2Q96Q42 1657 aa15.4■□□□□ 0.06
CALD1-217ENST00000475772 ARHGEF10O15013 1369 aa15.39■□□□□ 0.05
CALD1-217ENST00000475772 ZNF467Q7Z7K2 595 aaPredicted RBP15.39■□□□□ 0.05
CALD1-217ENST00000475772 MINK1Q8N4C8 1332 aaPredicted RBP15.39■□□□□ 0.05
CALD1-217ENST00000475772 NRAPQ86VF7 1730 aa15.38■□□□□ 0.05
CALD1-217ENST00000475772 WASLO00401 505 aaPredicted RBP15.38■□□□□ 0.05
CALD1-217ENST00000475772 RGL2O15211 777 aa15.38■□□□□ 0.05
CALD1-217ENST00000475772 KRT27Q7Z3Y8 459 aa15.38■□□□□ 0.05
CALD1-217ENST00000475772 DCAF11Q8TEB1 546 aa15.38■□□□□ 0.05
CALD1-217ENST00000475772 BTG4Q9NY30 223 aa15.37■□□□□ 0.05
CALD1-217ENST00000475772 TRPC6Q9Y210 931 aa15.37■□□□□ 0.05
CALD1-217ENST00000475772 CCDC9Q9Y3X0 531 aaKnown RBP15.37■□□□□ 0.05
CALD1-217ENST00000475772 CRYBG1Q9Y4K1 1723 aa15.36■□□□□ 0.05
CALD1-217ENST00000475772 FAM98CQ17RN3 349 aaKnown RBP15.35■□□□□ 0.05
CALD1-217ENST00000475772 TULP4Q9NRJ4 1543 aa15.34■□□□□ 0.05
CALD1-217ENST00000475772 RIOK3O14730 519 aaKnown RBP15.33■□□□□ 0.04
CALD1-217ENST00000475772 COL14A1Q05707 1796 aaKnown RBP15.33■□□□□ 0.04
CALD1-217ENST00000475772 GPRASP1Q5JY77 1395 aa15.33■□□□□ 0.04
CALD1-217ENST00000475772 FAM182BQ5T319 152 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms