RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 IRX2Q9BZI1 471 aaPredicted RBP13.86□□□□□ -0.19
SMC5-203ENST00000475540 PDZRN3Q9UPQ7 1066 aa13.86□□□□□ -0.19
SMC5-203ENST00000475540 WNT7AO00755 349 aa13.85□□□□□ -0.19
SMC5-203ENST00000475540 GDF9O60383 454 aa13.85□□□□□ -0.19
SMC5-203ENST00000475540 NBPF14Q5TI25 921 aa13.85□□□□□ -0.19
SMC5-203ENST00000475540 SNRKQ9NRH2 765 aa13.85□□□□□ -0.19
SMC5-203ENST00000475540 EPS8L1Q8TE68 723 aa13.84□□□□□ -0.19
SMC5-203ENST00000475540 PKD2L1Q9P0L9 805 aa13.84□□□□□ -0.19
SMC5-203ENST00000475540 FKBPLQ9UIM3 349 aa13.84□□□□□ -0.19
SMC5-203ENST00000475540 APBB1O00213 710 aa13.83□□□□□ -0.2
SMC5-203ENST00000475540 GFRA3O60609 400 aa13.83□□□□□ -0.2
SMC5-203ENST00000475540 PRR20EP86478 221 aa13.83□□□□□ -0.2
SMC5-203ENST00000475540 PRR20CP86479 221 aa13.83□□□□□ -0.2
SMC5-203ENST00000475540 PRR20DP86480 221 aa13.83□□□□□ -0.2
SMC5-203ENST00000475540 PRR20BP86481 221 aa13.83□□□□□ -0.2
SMC5-203ENST00000475540 PRR20AP86496 221 aa13.83□□□□□ -0.2
SMC5-203ENST00000475540 GPKOWQ92917 476 aaPredicted RBP eCLIP13.83□□□□□ -0.2
SMC5-203ENST00000475540 TNFRSF10AO00220 468 aa13.82□□□□□ -0.2
SMC5-203ENST00000475540 AGERQ15109 404 aa13.82□□□□□ -0.2
SMC5-203ENST00000475540 TRIM67Q6ZTA4 783 aa13.82□□□□□ -0.2
SMC5-203ENST00000475540 EHBP1Q8NDI1 1231 aa13.82□□□□□ -0.2
SMC5-203ENST00000475540 SOCS7O14512 581 aa13.81□□□□□ -0.2
SMC5-203ENST00000475540 LAPTM4AQ15012 233 aa13.81□□□□□ -0.2
SMC5-203ENST00000475540 TRIM34Q9BYJ4 488 aa13.81□□□□□ -0.2
SMC5-203ENST00000475540 BPHLQ86WA6 291 aaPredicted RBP13.8□□□□□ -0.2
SMC5-203ENST00000475540 MTMR14Q8NCE2 650 aa13.8□□□□□ -0.2
SMC5-203ENST00000475540 MRGPRX2Q96LB1 330 aa13.8□□□□□ -0.2
SMC5-203ENST00000475540 ZC3H4Q9UPT8 1303 aaKnown RBP13.8□□□□□ -0.2
SMC5-203ENST00000475540 GJD4Q96KN9 370 aaPredicted RBP13.79□□□□□ -0.2
SMC5-203ENST00000475540 VARSP26640 1264 aaKnown RBP13.78□□□□□ -0.2
SMC5-203ENST00000475540 PDXDC2PQ6P474 469 aa13.78□□□□□ -0.2
SMC5-203ENST00000475540 CYP4X1Q8N118 509 aa13.78□□□□□ -0.2
SMC5-203ENST00000475540 FOXJ1Q92949 421 aa13.78□□□□□ -0.2
SMC5-203ENST00000475540 PRM3Q9NNZ6 103 aa13.78□□□□□ -0.2
SMC5-203ENST00000475540 NRG2O14511 850 aaPredicted RBP13.76□□□□□ -0.21
SMC5-203ENST00000475540 TTC24A2A3L6 582 aaPredicted RBP13.75□□□□□ -0.21
SMC5-203ENST00000475540 SNIP1Q8TAD8 396 aaKnown RBP13.75□□□□□ -0.21
SMC5-203ENST00000475540 PTK2Q05397 1052 aa13.74□□□□□ -0.21
SMC5-203ENST00000475540 NDUFB9Q9Y6M9 179 aa13.74□□□□□ -0.21
SMC5-203ENST00000475540 FLIIQ13045 1269 aa13.73□□□□□ -0.21
SMC5-203ENST00000475540 SH3BP5LQ7L8J4 393 aa13.73□□□□□ -0.21
SMC5-203ENST00000475540 FAM174AQ8TBP5 190 aa13.73□□□□□ -0.21
SMC5-203ENST00000475540 GPSM3Q9Y4H4 160 aa13.73□□□□□ -0.21
SMC5-203ENST00000475540 MAGEB6P1A0A0J9YX57 407 aa13.72□□□□□ -0.21
SMC5-203ENST00000475540 SIAH2O43255 324 aa13.72□□□□□ -0.21
SMC5-203ENST00000475540 SH3RF1Q7Z6J0 888 aa13.72□□□□□ -0.21
SMC5-203ENST00000475540 ARHGAP9Q9BRR9 750 aa13.72□□□□□ -0.21
SMC5-203ENST00000475540 TOR4AQ9NXH8 423 aa13.72□□□□□ -0.21
SMC5-203ENST00000475540 MCM6Q14566 821 aa13.71□□□□□ -0.21
SMC5-203ENST00000475540 C4orf48Q5BLP8 95 aa13.7□□□□□ -0.22
SMC5-203ENST00000475540 ZBTB33Q86T24 672 aa13.7□□□□□ -0.22
SMC5-203ENST00000475540 CARD14Q9BXL6 1004 aa13.7□□□□□ -0.22
SMC5-203ENST00000475540 ALDH1A1P00352 501 aa13.68□□□□□ -0.22
SMC5-203ENST00000475540 MPNDQ8N594 471 aa13.67□□□□□ -0.22
SMC5-203ENST00000475540 FAM187AA6NFU0 413 aa13.66□□□□□ -0.22
SMC5-203ENST00000475540 PKDCCQ504Y2 493 aa13.66□□□□□ -0.22
SMC5-203ENST00000475540 DGAT1O75907 488 aa13.65□□□□□ -0.22
SMC5-203ENST00000475540 ARID5BQ14865 1188 aa13.65□□□□□ -0.22
SMC5-203ENST00000475540 TBC1D2BQ9UPU7 963 aa13.65□□□□□ -0.22
SMC5-203ENST00000475540 ZBBXA8MT70 800 aa13.64□□□□□ -0.23
SMC5-203ENST00000475540 J3QL48 77 aa13.64□□□□□ -0.23
SMC5-203ENST00000475540 ERFEQ4G0M1 354 aa13.64□□□□□ -0.23
SMC5-203ENST00000475540 C1QTNF2Q9BXJ5 285 aa13.64□□□□□ -0.23
SMC5-203ENST00000475540 WASF2Q9Y6W5 498 aa13.64□□□□□ -0.23
SMC5-203ENST00000475540 Q6ZNB5 142 aa13.63□□□□□ -0.23
SMC5-203ENST00000475540 ADAM32Q8TC27 787 aa13.63□□□□□ -0.23
SMC5-203ENST00000475540 GDPD2Q9HCC8 539 aa13.63□□□□□ -0.23
SMC5-203ENST00000475540 TLL2Q9Y6L7 1015 aa13.63□□□□□ -0.23
SMC5-203ENST00000475540 SMPD1P17405 629 aa13.62□□□□□ -0.23
SMC5-203ENST00000475540 TRMT44Q8IYL2 757 aaKnown RBP13.62□□□□□ -0.23
SMC5-203ENST00000475540 CDK15Q96Q40 435 aa13.62□□□□□ -0.23
SMC5-203ENST00000475540 OCSTAMPQ9BR26 566 aa13.62□□□□□ -0.23
SMC5-203ENST00000475540 UBTFP17480 764 aaKnown RBP13.61□□□□□ -0.23
SMC5-203ENST00000475540 RAD21O60216 631 aa13.6□□□□□ -0.23
SMC5-203ENST00000475540 ABL2P42684 1182 aa13.6□□□□□ -0.23
SMC5-203ENST00000475540 FBXO45P0C2W1 286 aa13.59□□□□□ -0.23
SMC5-203ENST00000475540 NR1H3Q13133 447 aa13.59□□□□□ -0.23
SMC5-203ENST00000475540 VASH1Q7L8A9 365 aaPredicted RBP13.59□□□□□ -0.23
SMC5-203ENST00000475540 SLC10A4Q96EP9 437 aa13.59□□□□□ -0.23
SMC5-203ENST00000475540 CDV3Q9UKY7 258 aaKnown RBP13.59□□□□□ -0.23
SMC5-203ENST00000475540 ZNF330Q9Y3S2 320 aaPredicted RBP13.59□□□□□ -0.23
SMC5-203ENST00000475540 GPR37L1O60883 481 aa13.58□□□□□ -0.24
SMC5-203ENST00000475540 DZIP3Q86Y13 1208 aaKnown RBP13.58□□□□□ -0.24
SMC5-203ENST00000475540 COG6Q9Y2V7 657 aa13.58□□□□□ -0.24
SMC5-203ENST00000475540 MAP4K5Q9Y4K4 846 aa13.58□□□□□ -0.24
SMC5-203ENST00000475540 ADH1CP00326 375 aa13.57□□□□□ -0.24
SMC5-203ENST00000475540 NR5A1Q13285 461 aa13.55□□□□□ -0.24
SMC5-203ENST00000475540 GTF3C3Q9Y5Q9 886 aa13.55□□□□□ -0.24
SMC5-203ENST00000475540 GRM5P41594 1212 aa13.54□□□□□ -0.24
SMC5-203ENST00000475540 WWC1Q8IX03 1113 aa13.54□□□□□ -0.24
SMC5-203ENST00000475540 ZNF592Q92610 1267 aa13.54□□□□□ -0.24
SMC5-203ENST00000475540 HPS1Q92902 700 aa13.54□□□□□ -0.24
SMC5-203ENST00000475540 PCDHB9Q9Y5E1 797 aa13.54□□□□□ -0.24
SMC5-203ENST00000475540 AVPP01185 164 aa13.53□□□□□ -0.24
SMC5-203ENST00000475540 MCCD1P59942 119 aaPredicted RBP13.53□□□□□ -0.24
SMC5-203ENST00000475540 IRF5Q13568 498 aa13.53□□□□□ -0.24
SMC5-203ENST00000475540 WASHC4Q2M389 1173 aa13.53□□□□□ -0.24
SMC5-203ENST00000475540 TRAF7Q6Q0C0 670 aa13.53□□□□□ -0.24
SMC5-203ENST00000475540 POM121Q96HA1 1249 aa13.53□□□□□ -0.24
SMC5-203ENST00000475540 NNTQ13423 1086 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms