RNA–Protein interactions for RNA: ENST00000475524.1

MCF2L-224, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-224ENST00000475524 ANKRD26Q9UPS8 1709 aa20.83■□□□□ 0.92
MCF2L-224ENST00000475524 PHLPP1O60346 1717 aa20.82■□□□□ 0.92
MCF2L-224ENST00000475524 PER1O15534 1290 aaPredicted RBP20.82■□□□□ 0.92
MCF2L-224ENST00000475524 DDX10Q13206 875 aaKnown RBP20.82■□□□□ 0.92
MCF2L-224ENST00000475524 NSD2O96028 1365 aa20.82■□□□□ 0.92
MCF2L-224ENST00000475524 CARD14Q9BXL6 1004 aa20.81■□□□□ 0.92
MCF2L-224ENST00000475524 COL16A1Q07092 1604 aaPredicted RBP20.81■□□□□ 0.92
MCF2L-224ENST00000475524 KRT28Q7Z3Y7 464 aa20.8■□□□□ 0.92
MCF2L-224ENST00000475524 PIK3C2AO00443 1686 aa20.8■□□□□ 0.92
MCF2L-224ENST00000475524 CGNL1Q0VF96 1302 aa20.79■□□□□ 0.92
MCF2L-224ENST00000475524 TTC21BQ7Z4L5 1316 aa20.79■□□□□ 0.92
MCF2L-224ENST00000475524 TNS3Q68CZ2 1445 aa20.79■□□□□ 0.92
MCF2L-224ENST00000475524 KNSTRNQ9Y448 316 aa20.79■□□□□ 0.92
MCF2L-224ENST00000475524 MED1Q15648 1581 aaPredicted RBP20.77■□□□□ 0.92
MCF2L-224ENST00000475524 ARHGEF10O15013 1369 aa20.77■□□□□ 0.92
MCF2L-224ENST00000475524 PIP4K2BP78356 416 aa20.77■□□□□ 0.92
MCF2L-224ENST00000475524 USP31Q70CQ4 1352 aa20.76■□□□□ 0.91
MCF2L-224ENST00000475524 SPATA31A3Q5VYP0 1347 aa20.76■□□□□ 0.91
MCF2L-224ENST00000475524 COL22A1Q8NFW1 1626 aaPredicted RBP20.75■□□□□ 0.91
MCF2L-224ENST00000475524 MARF1Q9Y4F3 1742 aaKnown RBP20.75■□□□□ 0.91
MCF2L-224ENST00000475524 AMER1Q5JTC6 1135 aaPredicted RBP20.74■□□□□ 0.91
MCF2L-224ENST00000475524 SCAF1Q9H7N4 1312 aaKnown RBP20.74■□□□□ 0.91
MCF2L-224ENST00000475524 OVOS2A0A0J9YW53 1432 aa20.73■□□□□ 0.91
MCF2L-224ENST00000475524 OVOS2Q6IE36 1432 aa20.73■□□□□ 0.91
MCF2L-224ENST00000475524 LRRC59Q96AG4 307 aaKnown RBP20.73■□□□□ 0.91
MCF2L-224ENST00000475524 SHPRHQ149N8 1683 aa20.73■□□□□ 0.91
MCF2L-224ENST00000475524 CRYBG1Q9Y4K1 1723 aa20.73■□□□□ 0.91
MCF2L-224ENST00000475524 FYB1O15117 783 aa20.71■□□□□ 0.91
MCF2L-224ENST00000475524 DDX17Q92841 729 aaKnown RBP20.71■□□□□ 0.91
MCF2L-224ENST00000475524 SLIT3O75094 1523 aa20.7■□□□□ 0.9
MCF2L-224ENST00000475524 XPCQ01831 940 aaPredicted RBP20.7■□□□□ 0.9
MCF2L-224ENST00000475524 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.7■□□□□ 0.95e-6■■■■□ 20.3
MCF2L-224ENST00000475524 FBXO41Q8TF61 875 aa20.7■□□□□ 0.9
MCF2L-224ENST00000475524 PAK3O75914 559 aaPredicted RBP20.69■□□□□ 0.9
MCF2L-224ENST00000475524 NLRP13Q86W25 1043 aa20.69■□□□□ 0.9
MCF2L-224ENST00000475524 ABTB2Q8N961 1025 aa20.69■□□□□ 0.9
MCF2L-224ENST00000475524 ABCA3Q99758 1704 aa20.69■□□□□ 0.9
MCF2L-224ENST00000475524 PHRF1Q9P1Y6 1649 aaKnown RBP20.68■□□□□ 0.9
MCF2L-224ENST00000475524 USP19O94966 1318 aa20.68■□□□□ 0.9
MCF2L-224ENST00000475524 NME9Q86XW9 330 aa20.67■□□□□ 0.9
MCF2L-224ENST00000475524 COG3Q96JB2 828 aa20.66■□□□□ 0.9
MCF2L-224ENST00000475524 PNPLA6Q8IY17 1366 aa20.66■□□□□ 0.9
MCF2L-224ENST00000475524 PARD3Q8TEW0 1356 aa20.65■□□□□ 0.9
MCF2L-224ENST00000475524 NLRP6P59044 892 aa20.65■□□□□ 0.9
MCF2L-224ENST00000475524 JCADQ9P266 1359 aa20.64■□□□□ 0.89
MCF2L-224ENST00000475524 GGNBP2Q9H3C7 697 aa20.64■□□□□ 0.89
MCF2L-224ENST00000475524 AATKQ6ZMQ8 1374 aa20.63■□□□□ 0.89
MCF2L-224ENST00000475524 RALBP1Q15311 655 aa20.63■□□□□ 0.89
MCF2L-224ENST00000475524 NFAT5O94916 1531 aa20.63■□□□□ 0.89
MCF2L-224ENST00000475524 KCNH5Q8NCM2 988 aa20.62■□□□□ 0.89
MCF2L-224ENST00000475524 DIEXFQ68CQ4 756 aaKnown RBP20.61■□□□□ 0.89
MCF2L-224ENST00000475524 MORC1Q86VD1 984 aa20.61■□□□□ 0.89
MCF2L-224ENST00000475524 ABCC6O95255 1503 aa20.61■□□□□ 0.89
MCF2L-224ENST00000475524 HSPA1LP34931 641 aa20.6■□□□□ 0.89
MCF2L-224ENST00000475524 CC2D1BQ5T0F9 858 aaKnown RBP20.6■□□□□ 0.89
MCF2L-224ENST00000475524 LMOD2Q6P5Q4 547 aa20.6■□□□□ 0.89
MCF2L-224ENST00000475524 PRKRIP1Q9H875 184 aaPredicted RBP20.59■□□□□ 0.89
MCF2L-224ENST00000475524 KIF24Q5T7B8 1368 aa20.59■□□□□ 0.89
MCF2L-224ENST00000475524 SPATA31A6Q5VVP1 1343 aa20.58■□□□□ 0.89
MCF2L-224ENST00000475524 MAP2P11137 1827 aaKnown RBP20.58■□□□□ 0.89
MCF2L-224ENST00000475524 ANP32CO43423 234 aa20.58■□□□□ 0.89
MCF2L-224ENST00000475524 ZRANB1Q9UGI0 708 aa20.58■□□□□ 0.89
MCF2L-224ENST00000475524 LTN1O94822 1766 aa20.58■□□□□ 0.89
MCF2L-224ENST00000475524 SMG6Q86US8 1419 aaKnown RBP20.58■□□□□ 0.88
MCF2L-224ENST00000475524 CPDO75976 1380 aa20.57■□□□□ 0.88
MCF2L-224ENST00000475524 GCP02774 474 aa20.56■□□□□ 0.88
MCF2L-224ENST00000475524 NUTM2GQ5VZR2 741 aa20.55■□□□□ 0.88
MCF2L-224ENST00000475524 RTL1A6NKG5 1358 aa20.54■□□□□ 0.88
MCF2L-224ENST00000475524 MYBBP1AQ9BQG0 1328 aaKnown RBP20.53■□□□□ 0.88
MCF2L-224ENST00000475524 CDK12Q9NYV4 1490 aaPredicted RBP20.52■□□□□ 0.88
MCF2L-224ENST00000475524 COL18A1P39060 1754 aa20.51■□□□□ 0.87
MCF2L-224ENST00000475524 COL14A1Q05707 1796 aaKnown RBP20.51■□□□□ 0.87
MCF2L-224ENST00000475524 PPP2R1AP30153 589 aa20.5■□□□□ 0.87
MCF2L-224ENST00000475524 ARHGEF25Q86VW2 580 aa20.5■□□□□ 0.87
MCF2L-224ENST00000475524 INSRP06213 1382 aa20.49■□□□□ 0.87
MCF2L-224ENST00000475524 LMO7Q8WWI1 1683 aa20.49■□□□□ 0.87
MCF2L-224ENST00000475524 HAP1P54257 671 aaPredicted RBP20.49■□□□□ 0.87
MCF2L-224ENST00000475524 PEAK1Q9H792 1746 aa20.49■□□□□ 0.87
MCF2L-224ENST00000475524 FLT4P35916 1363 aa20.48■□□□□ 0.87
MCF2L-224ENST00000475524 BLMP54132 1417 aaPredicted RBP20.48■□□□□ 0.87
MCF2L-224ENST00000475524 CABLES1Q8TDN4 633 aa20.48■□□□□ 0.87
MCF2L-224ENST00000475524 POLKQ9UBT6 870 aa20.48■□□□□ 0.87
MCF2L-224ENST00000475524 MAP3K19Q56UN5 1328 aa20.48■□□□□ 0.87
MCF2L-224ENST00000475524 NWD2Q9ULI1 1742 aa20.47■□□□□ 0.87
MCF2L-224ENST00000475524 FAM208AQ9UK61 1670 aaKnown RBP20.46■□□□□ 0.87
MCF2L-224ENST00000475524 KIAA0232Q92628 1395 aa20.46■□□□□ 0.87
MCF2L-224ENST00000475524 TNNT2P45379 298 aaPredicted RBP20.45■□□□□ 0.86
MCF2L-224ENST00000475524 PLCH1Q4KWH8 1693 aa20.45■□□□□ 0.86
MCF2L-224ENST00000475524 MTHFSP49914 203 aa20.44■□□□□ 0.86
MCF2L-224ENST00000475524 IP6K1Q92551 441 aa20.44■□□□□ 0.86
MCF2L-224ENST00000475524 LRP6O75581 1613 aa20.44■□□□□ 0.86
MCF2L-224ENST00000475524 CNGB1Q14028 1251 aaPredicted RBP20.43■□□□□ 0.86
MCF2L-224ENST00000475524 RRS1Q15050 365 aaKnown RBP20.43■□□□□ 0.86
MCF2L-224ENST00000475524 PRDM11Q9NQV5 511 aa20.43■□□□□ 0.86
MCF2L-224ENST00000475524 COL3A1P02461 1466 aaPredicted RBP20.43■□□□□ 0.86
MCF2L-224ENST00000475524 RGPD5Q99666 1765 aa20.42■□□□□ 0.86
MCF2L-224ENST00000475524 SOX12O15370 315 aa20.42■□□□□ 0.86
MCF2L-224ENST00000475524 AMPHP49418 695 aa20.42■□□□□ 0.86
MCF2L-224ENST00000475524 ZC3H6P61129 1189 aaKnown RBP20.42■□□□□ 0.86
MCF2L-224ENST00000475524 CFAP53Q96M91 514 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms